| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406241
Identifier: 41406241
GI number: 41406241
Start: 149254
End: 149571
Strand: Direct
Name: 41406241
Synonym: MAP0143
Alternate gene names: NA
Gene position: 149254-149571 (Clockwise)
Preceding gene: 41406239
Following gene: 41406242
Centisome position: 3.09
GC content: 60.38
Gene sequence:
>318_bases GTGTACAGATACCACTACTCGTCCCGAGGAAGGCAAATGATGAAGTACATTGCGGCAGCCGCGATCGCGCTCTCCGTCCT GCTGTCCAGCGCGTGTTCGGCCTCACAGGTCATCAACACCGGCGGCGACACCAAGTGCAAGGACTTCACCACACAGGACG AAAAGAAGCAGAACGACGAAGTCAGCAAGATGCTCAAGGACAAGAGCGGCACCGATCCGAGCAACGTCGAGATCTCCGCG ACGCGGCTGTCGGCGATGACGTACTGCCAGACGGTCGGGAAGCCGGACACCAAGATCTCCGAGGCGCCGCACGGCTGA
Upstream 100 bases:
>100_bases GCTATTCCCGCGCCGGCCGACGGTCCCGCCGCGGGCCGGCGTGCAAACATGGCTTCGGTCGGTGCGCACCGCACCGCGGG GTTTGAAATCAGGCAATTCG
Downstream 100 bases:
>100_bases CGGCGGCCGATCTTCGAATCACGATCACCGCAAATCTAGTGGGCGCTGCCGCGGGTTCCTAGGCTGCCCGGGTGGTCTCG ACCAACCCGGCGCCGGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MYRYHYSSRGRQMMKYIAAAAIALSVLLSSACSASQVINTGGDTKCKDFTTQDEKKQNDEVSKMLKDKSGTDPSNVEISA TRLSAMTYCQTVGKPDTKISEAPHG
Sequences:
>Translated_105_residues MYRYHYSSRGRQMMKYIAAAAIALSVLLSSACSASQVINTGGDTKCKDFTTQDEKKQNDEVSKMLKDKSGTDPSNVEISA TRLSAMTYCQTVGKPDTKISEAPHG >Mature_105_residues MYRYHYSSRGRQMMKYIAAAAIALSVLLSSACSASQVINTGGDTKCKDFTTQDEKKQNDEVSKMLKDKSGTDPSNVEISA TRLSAMTYCQTVGKPDTKISEAPHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11446; Mature: 11446
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRYHYSSRGRQMMKYIAAAAIALSVLLSSACSASQVINTGGDTKCKDFTTQDEKKQNDE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHH VSKMLKDKSGTDPSNVEISATRLSAMTYCQTVGKPDTKISEAPHG HHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MYRYHYSSRGRQMMKYIAAAAIALSVLLSSACSASQVINTGGDTKCKDFTTQDEKKQNDE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHH VSKMLKDKSGTDPSNVEISATRLSAMTYCQTVGKPDTKISEAPHG HHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA