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The map label for this gene is 41406214

Identifier: 41406214

GI number: 41406214

Start: 126473

End: 127819

Strand: Direct

Name: 41406214

Synonym: MAP0116

Alternate gene names: NA

Gene position: 126473-127819 (Clockwise)

Preceding gene: 41406213

Following gene: 41406215

Centisome position: 2.62

GC content: 70.45

Gene sequence:

>1347_bases
GTGCGCTCGGTTCACCGGCTGCGCCCGGCCGGCCGTCCACCAATCGCCCGGTCAGCGGCTGCTGCGGCTACGGTGATCTG
TATGCCATCGGCCAGCCGAGCGTCCGCGGATCCGGTGAAGCGGCGCCCGAAGGATCGCAAGGTCCAGATCGCCCGGGCCG
CCACCGACGCGTTCAGCGAGCTCGGTTACCACGCGGTCAGCATGGAGAACATCGCGGCGCGGGTGGGCATCTCGGCCGCC
GCCCTGTACCGGCATTCCCAGGGCAAATACGACTTGTTCCGTGAGGTCTTCCTGGCGCTGGGCCAGCAACTGGTGGACGC
CACGGCGTTCGCCGACGACCTGCCCGCCGACGCCGATCCGGGGGAAACCCTGAGCGCGCTCACCACCGCGCTGATCGACA
CCACCATCGTCAACCGCACCGCCGGCGGGCTCTATCGCTGGGAGGGTCGCTATCTGCGCGGCGACGACCAGCGCAAGCTG
GCCGAGCAGATCAAGGTGATCAACCGGCGGCTGCAGCGTCCGCTGATCAAGCTCCGGCCGAAACTCACGTCGCGGCAACG
CTGGATCCTGTCGGCGGCCACCCTGAGCGTCATCGGCAGCATCACCGACCACCGGTCCCGGCTCGGCAACGCCGAGATCC
GCGCGACGCTGAGCGACATCGCCGCCGCCGTGCTGAAGGCCGAGCTGCCGACACAGCGGGGCCGCGGCGCCGAACCGGCG
CGGGCGCCGACGCTGACCAGCGCCGCCGGCAGCTACGAACTGCTGCTGCACGAATCGATGCGGCTGTTCAACGAGCGCGG
CTACCGGGAAACCGGGATGGAAGACATTGCCGCGGCGGTCGGCATCCCGGTTGCCAGCATCTACCAATACTTTCCGGGGA
AGGCCGCGATCCTGGCGGTCTATTACCGGCGCGCCGCCGACCAGCTCTCCGCCGACCTGTCCAGCATCCTGGCCACCAGC
AGCGACCCGGAGCAGGCGCTGGCGCGGCTCATCGAGGCCTACGTCACGCGGTCCTTCGCCAACCCCGAGCTGGCGTGCGT
GTACTACACCGAGCGGCACAACCTGCCGGAGACAGACGCGGTGCTGCTCTACAACATTCAGCGCTCCACCGTCGAATCCT
GGGCCCGGCTCGCCGTGGCGGCCAGACCGGAACTGACCCTGGGCCGCGCCCGCTACGCCGTGCACGCCGCGTTCGCCCTG
GCGGTGGACATCGGCCGGCTGGTTTACCCCAACACCGGCGCGCCCGCCAGCACCACGGTTCGGCGGCTGATGGAGGTCAC
CGTGCTGGGACGACCCGCGGCCGCATCGCGCGACGGACTTCGCGGCGCCGGCCGGCAACGCCGCTGA

Upstream 100 bases:

>100_bases
TCCCACTCGGCGTGCTTGCCCCGGTGCTGCGGCCGGAATTCGGCGGGGCGTAACGGGGTCGGCGGCCAGTGACCTCGGAT
ATCACGCTGCGCCCAACCGG

Downstream 100 bases:

>100_bases
TGGGTTGGCGAACCACGCTCCACTTTTCGGCCGGCTCAGGCGCGCGGCGGCAACGCCTGTTCCCGGACCGCCCATGCGGC
CCCGCATCTTCGGTTGCACC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator TetR Family Protein; Tetr Family Transcriptional Regulator; TetR-Family Transcriptional Repressor Mce3R; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; TetR-Family Protein Transcriptional Regulator

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MRSVHRLRPAGRPPIARSAAAAATVICMPSASRASADPVKRRPKDRKVQIARAATDAFSELGYHAVSMENIAARVGISAA
ALYRHSQGKYDLFREVFLALGQQLVDATAFADDLPADADPGETLSALTTALIDTTIVNRTAGGLYRWEGRYLRGDDQRKL
AEQIKVINRRLQRPLIKLRPKLTSRQRWILSAATLSVIGSITDHRSRLGNAEIRATLSDIAAAVLKAELPTQRGRGAEPA
RAPTLTSAAGSYELLLHESMRLFNERGYRETGMEDIAAAVGIPVASIYQYFPGKAAILAVYYRRAADQLSADLSSILATS
SDPEQALARLIEAYVTRSFANPELACVYYTERHNLPETDAVLLYNIQRSTVESWARLAVAARPELTLGRARYAVHAAFAL
AVDIGRLVYPNTGAPASTTVRRLMEVTVLGRPAAASRDGLRGAGRQRR

Sequences:

>Translated_448_residues
MRSVHRLRPAGRPPIARSAAAAATVICMPSASRASADPVKRRPKDRKVQIARAATDAFSELGYHAVSMENIAARVGISAA
ALYRHSQGKYDLFREVFLALGQQLVDATAFADDLPADADPGETLSALTTALIDTTIVNRTAGGLYRWEGRYLRGDDQRKL
AEQIKVINRRLQRPLIKLRPKLTSRQRWILSAATLSVIGSITDHRSRLGNAEIRATLSDIAAAVLKAELPTQRGRGAEPA
RAPTLTSAAGSYELLLHESMRLFNERGYRETGMEDIAAAVGIPVASIYQYFPGKAAILAVYYRRAADQLSADLSSILATS
SDPEQALARLIEAYVTRSFANPELACVYYTERHNLPETDAVLLYNIQRSTVESWARLAVAARPELTLGRARYAVHAAFAL
AVDIGRLVYPNTGAPASTTVRRLMEVTVLGRPAAASRDGLRGAGRQRR
>Mature_448_residues
MRSVHRLRPAGRPPIARSAAAAATVICMPSASRASADPVKRRPKDRKVQIARAATDAFSELGYHAVSMENIAARVGISAA
ALYRHSQGKYDLFREVFLALGQQLVDATAFADDLPADADPGETLSALTTALIDTTIVNRTAGGLYRWEGRYLRGDDQRKL
AEQIKVINRRLQRPLIKLRPKLTSRQRWILSAATLSVIGSITDHRSRLGNAEIRATLSDIAAAVLKAELPTQRGRGAEPA
RAPTLTSAAGSYELLLHESMRLFNERGYRETGMEDIAAAVGIPVASIYQYFPGKAAILAVYYRRAADQLSADLSSILATS
SDPEQALARLIEAYVTRSFANPELACVYYTERHNLPETDAVLLYNIQRSTVESWARLAVAARPELTLGRARYAVHAAFAL
AVDIGRLVYPNTGAPASTTVRRLMEVTVLGRPAAASRDGLRGAGRQRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48826; Mature: 48826

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSVHRLRPAGRPPIARSAAAAATVICMPSASRASADPVKRRPKDRKVQIARAATDAFSE
CCCCHHCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCHHHCCCCCCCEEHHHHHHHHHHH
LGYHAVSMENIAARVGISAAALYRHSQGKYDLFREVFLALGQQLVDATAFADDLPADADP
HCCHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GETLSALTTALIDTTIVNRTAGGLYRWEGRYLRGDDQRKLAEQIKVINRRLQRPLIKLRP
CHHHHHHHHHHHHHHHHHHCCCCEEEECCCEECCCHHHHHHHHHHHHHHHHHCCHHHHCC
KLTSRQRWILSAATLSVIGSITDHRSRLGNAEIRATLSDIAAAVLKAELPTQRGRGAEPA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RAPTLTSAAGSYELLLHESMRLFNERGYRETGMEDIAAAVGIPVASIYQYFPGKAAILAV
CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCCHHHHHHHCCCHHHHHHH
YYRRAADQLSADLSSILATSSDPEQALARLIEAYVTRSFANPELACVYYTERHNLPETDA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCE
VLLYNIQRSTVESWARLAVAARPELTLGRARYAVHAAFALAVDIGRLVYPNTGAPASTTV
EEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHH
RRLMEVTVLGRPAAASRDGLRGAGRQRR
HHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSVHRLRPAGRPPIARSAAAAATVICMPSASRASADPVKRRPKDRKVQIARAATDAFSE
CCCCHHCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCHHHCCCCCCCEEHHHHHHHHHHH
LGYHAVSMENIAARVGISAAALYRHSQGKYDLFREVFLALGQQLVDATAFADDLPADADP
HCCHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GETLSALTTALIDTTIVNRTAGGLYRWEGRYLRGDDQRKLAEQIKVINRRLQRPLIKLRP
CHHHHHHHHHHHHHHHHHHCCCCEEEECCCEECCCHHHHHHHHHHHHHHHHHCCHHHHCC
KLTSRQRWILSAATLSVIGSITDHRSRLGNAEIRATLSDIAAAVLKAELPTQRGRGAEPA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RAPTLTSAAGSYELLLHESMRLFNERGYRETGMEDIAAAVGIPVASIYQYFPGKAAILAV
CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCCHHHHHHHCCCHHHHHHH
YYRRAADQLSADLSSILATSSDPEQALARLIEAYVTRSFANPELACVYYTERHNLPETDA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCE
VLLYNIQRSTVESWARLAVAARPELTLGRARYAVHAAFALAVDIGRLVYPNTGAPASTTV
EEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHH
RRLMEVTVLGRPAAASRDGLRGAGRQRR
HHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA