Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41406213

Identifier: 41406213

GI number: 41406213

Start: 125640

End: 126425

Strand: Direct

Name: 41406213

Synonym: MAP0115

Alternate gene names: NA

Gene position: 125640-126425 (Clockwise)

Preceding gene: 41406212

Following gene: 41406214

Centisome position: 2.6

GC content: 66.67

Gene sequence:

>786_bases
ATGCGCATCTTCCAGTTCTCGGCCGGCGCGGCGGCGGTGACGATGGCGGCGCTCACCGCACCCGTGGCGTCGGCGTCGGC
GCAGTCGTTCTGCGGCGATCTCGGCGGCGATTGGGACGGGCAGTACTGCCACACCTCGGTGCTGTCGGAACGAAAAGCCG
TCCGCGACATCAAGATGGCGATGCCCGGCGATTTGATCGACAACCCGACCAGCGGCCCGCCGATTCGCCAATATCTGCGC
ACCCTGATGACCAACTGGCGCAGCAAGGGCGCCTCGATGGTCCAGGACAGCTGGGGCGAGGAGAACTTTCAGGTCTTCGG
ACACGGCCCGGCCCAAAGCGTGGTGTTCCACGAGGACTACCACGCCGACGGTCCGGCCTTCAACAACGCCTACCGCACCT
TCACCTTCGACATGGCCAACGGCAGGCAGCTACAGCTGGCCGACATCACCAAACCCGGTGTGGACCCGTTGGCCGCCATC
CCGCCGTTGGCCGAACCGTTCATCCAGGAGGCCCTCGACCGCGCCGCATGGCAGCACTCGCCGGGAACGTATCCCTTCAC
CGTCGATCGTTGGACACCGGACAAGGTGTTCTCGGGCGGCTACAAGGCGTGGGCGCTGACGCCCGACGAGCTGATCCTGT
ACCTGCCGGATTACCCGGTCGGCCACGACTCCCCGATCCAGTACGGGCAATCCGAGCAGTGGTCGATGGACGGAGGCACC
GCCCAGCCGCACATCCCACTCGGCGTGCTTGCCCCGGTGCTGCGGCCGGAATTCGGCGGGGCGTAA

Upstream 100 bases:

>100_bases
GACGGCCGCGTCGACCGCAGCCGGATGAAGATCACCATGGAAAATGTCGGCGGCCGCTGGCTGGCCAGCAAAGTCGAACT
GCCGTAAGGCGTTTCGGGCG

Downstream 100 bases:

>100_bases
CGGGGTCGGCGGCCAGTGACCTCGGATATCACGCTGCGCCCAACCGGGTGCGCTCGGTTCACCGGCTGCGCCCGGCCGGC
CGTCCACCAATCGCCCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MRIFQFSAGAAAVTMAALTAPVASASAQSFCGDLGGDWDGQYCHTSVLSERKAVRDIKMAMPGDLIDNPTSGPPIRQYLR
TLMTNWRSKGASMVQDSWGEENFQVFGHGPAQSVVFHEDYHADGPAFNNAYRTFTFDMANGRQLQLADITKPGVDPLAAI
PPLAEPFIQEALDRAAWQHSPGTYPFTVDRWTPDKVFSGGYKAWALTPDELILYLPDYPVGHDSPIQYGQSEQWSMDGGT
AQPHIPLGVLAPVLRPEFGGA

Sequences:

>Translated_261_residues
MRIFQFSAGAAAVTMAALTAPVASASAQSFCGDLGGDWDGQYCHTSVLSERKAVRDIKMAMPGDLIDNPTSGPPIRQYLR
TLMTNWRSKGASMVQDSWGEENFQVFGHGPAQSVVFHEDYHADGPAFNNAYRTFTFDMANGRQLQLADITKPGVDPLAAI
PPLAEPFIQEALDRAAWQHSPGTYPFTVDRWTPDKVFSGGYKAWALTPDELILYLPDYPVGHDSPIQYGQSEQWSMDGGT
AQPHIPLGVLAPVLRPEFGGA
>Mature_261_residues
MRIFQFSAGAAAVTMAALTAPVASASAQSFCGDLGGDWDGQYCHTSVLSERKAVRDIKMAMPGDLIDNPTSGPPIRQYLR
TLMTNWRSKGASMVQDSWGEENFQVFGHGPAQSVVFHEDYHADGPAFNNAYRTFTFDMANGRQLQLADITKPGVDPLAAI
PPLAEPFIQEALDRAAWQHSPGTYPFTVDRWTPDKVFSGGYKAWALTPDELILYLPDYPVGHDSPIQYGQSEQWSMDGGT
AQPHIPLGVLAPVLRPEFGGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28462; Mature: 28462

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIFQFSAGAAAVTMAALTAPVASASAQSFCGDLGGDWDGQYCHTSVLSERKAVRDIKMA
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
MPGDLIDNPTSGPPIRQYLRTLMTNWRSKGASMVQDSWGEENFQVFGHGPAQSVVFHEDY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCCCCEEEECCC
HADGPAFNNAYRTFTFDMANGRQLQLADITKPGVDPLAAIPPLAEPFIQEALDRAAWQHS
CCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCC
PGTYPFTVDRWTPDKVFSGGYKAWALTPDELILYLPDYPVGHDSPIQYGQSEQWSMDGGT
CCCCCEEECCCCCHHHHCCCEEEEEECHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
AQPHIPLGVLAPVLRPEFGGA
CCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRIFQFSAGAAAVTMAALTAPVASASAQSFCGDLGGDWDGQYCHTSVLSERKAVRDIKMA
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
MPGDLIDNPTSGPPIRQYLRTLMTNWRSKGASMVQDSWGEENFQVFGHGPAQSVVFHEDY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCCCCEEEECCC
HADGPAFNNAYRTFTFDMANGRQLQLADITKPGVDPLAAIPPLAEPFIQEALDRAAWQHS
CCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCC
PGTYPFTVDRWTPDKVFSGGYKAWALTPDELILYLPDYPVGHDSPIQYGQSEQWSMDGGT
CCCCCEEECCCCCHHHHCCCEEEEEECHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
AQPHIPLGVLAPVLRPEFGGA
CCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA