| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406213
Identifier: 41406213
GI number: 41406213
Start: 125640
End: 126425
Strand: Direct
Name: 41406213
Synonym: MAP0115
Alternate gene names: NA
Gene position: 125640-126425 (Clockwise)
Preceding gene: 41406212
Following gene: 41406214
Centisome position: 2.6
GC content: 66.67
Gene sequence:
>786_bases ATGCGCATCTTCCAGTTCTCGGCCGGCGCGGCGGCGGTGACGATGGCGGCGCTCACCGCACCCGTGGCGTCGGCGTCGGC GCAGTCGTTCTGCGGCGATCTCGGCGGCGATTGGGACGGGCAGTACTGCCACACCTCGGTGCTGTCGGAACGAAAAGCCG TCCGCGACATCAAGATGGCGATGCCCGGCGATTTGATCGACAACCCGACCAGCGGCCCGCCGATTCGCCAATATCTGCGC ACCCTGATGACCAACTGGCGCAGCAAGGGCGCCTCGATGGTCCAGGACAGCTGGGGCGAGGAGAACTTTCAGGTCTTCGG ACACGGCCCGGCCCAAAGCGTGGTGTTCCACGAGGACTACCACGCCGACGGTCCGGCCTTCAACAACGCCTACCGCACCT TCACCTTCGACATGGCCAACGGCAGGCAGCTACAGCTGGCCGACATCACCAAACCCGGTGTGGACCCGTTGGCCGCCATC CCGCCGTTGGCCGAACCGTTCATCCAGGAGGCCCTCGACCGCGCCGCATGGCAGCACTCGCCGGGAACGTATCCCTTCAC CGTCGATCGTTGGACACCGGACAAGGTGTTCTCGGGCGGCTACAAGGCGTGGGCGCTGACGCCCGACGAGCTGATCCTGT ACCTGCCGGATTACCCGGTCGGCCACGACTCCCCGATCCAGTACGGGCAATCCGAGCAGTGGTCGATGGACGGAGGCACC GCCCAGCCGCACATCCCACTCGGCGTGCTTGCCCCGGTGCTGCGGCCGGAATTCGGCGGGGCGTAA
Upstream 100 bases:
>100_bases GACGGCCGCGTCGACCGCAGCCGGATGAAGATCACCATGGAAAATGTCGGCGGCCGCTGGCTGGCCAGCAAAGTCGAACT GCCGTAAGGCGTTTCGGGCG
Downstream 100 bases:
>100_bases CGGGGTCGGCGGCCAGTGACCTCGGATATCACGCTGCGCCCAACCGGGTGCGCTCGGTTCACCGGCTGCGCCCGGCCGGC CGTCCACCAATCGCCCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MRIFQFSAGAAAVTMAALTAPVASASAQSFCGDLGGDWDGQYCHTSVLSERKAVRDIKMAMPGDLIDNPTSGPPIRQYLR TLMTNWRSKGASMVQDSWGEENFQVFGHGPAQSVVFHEDYHADGPAFNNAYRTFTFDMANGRQLQLADITKPGVDPLAAI PPLAEPFIQEALDRAAWQHSPGTYPFTVDRWTPDKVFSGGYKAWALTPDELILYLPDYPVGHDSPIQYGQSEQWSMDGGT AQPHIPLGVLAPVLRPEFGGA
Sequences:
>Translated_261_residues MRIFQFSAGAAAVTMAALTAPVASASAQSFCGDLGGDWDGQYCHTSVLSERKAVRDIKMAMPGDLIDNPTSGPPIRQYLR TLMTNWRSKGASMVQDSWGEENFQVFGHGPAQSVVFHEDYHADGPAFNNAYRTFTFDMANGRQLQLADITKPGVDPLAAI PPLAEPFIQEALDRAAWQHSPGTYPFTVDRWTPDKVFSGGYKAWALTPDELILYLPDYPVGHDSPIQYGQSEQWSMDGGT AQPHIPLGVLAPVLRPEFGGA >Mature_261_residues MRIFQFSAGAAAVTMAALTAPVASASAQSFCGDLGGDWDGQYCHTSVLSERKAVRDIKMAMPGDLIDNPTSGPPIRQYLR TLMTNWRSKGASMVQDSWGEENFQVFGHGPAQSVVFHEDYHADGPAFNNAYRTFTFDMANGRQLQLADITKPGVDPLAAI PPLAEPFIQEALDRAAWQHSPGTYPFTVDRWTPDKVFSGGYKAWALTPDELILYLPDYPVGHDSPIQYGQSEQWSMDGGT AQPHIPLGVLAPVLRPEFGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28462; Mature: 28462
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIFQFSAGAAAVTMAALTAPVASASAQSFCGDLGGDWDGQYCHTSVLSERKAVRDIKMA CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH MPGDLIDNPTSGPPIRQYLRTLMTNWRSKGASMVQDSWGEENFQVFGHGPAQSVVFHEDY CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCCCCEEEECCC HADGPAFNNAYRTFTFDMANGRQLQLADITKPGVDPLAAIPPLAEPFIQEALDRAAWQHS CCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCC PGTYPFTVDRWTPDKVFSGGYKAWALTPDELILYLPDYPVGHDSPIQYGQSEQWSMDGGT CCCCCEEECCCCCHHHHCCCEEEEEECHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCC AQPHIPLGVLAPVLRPEFGGA CCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MRIFQFSAGAAAVTMAALTAPVASASAQSFCGDLGGDWDGQYCHTSVLSERKAVRDIKMA CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH MPGDLIDNPTSGPPIRQYLRTLMTNWRSKGASMVQDSWGEENFQVFGHGPAQSVVFHEDY CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCCCCEEEECCC HADGPAFNNAYRTFTFDMANGRQLQLADITKPGVDPLAAIPPLAEPFIQEALDRAAWQHS CCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCC PGTYPFTVDRWTPDKVFSGGYKAWALTPDELILYLPDYPVGHDSPIQYGQSEQWSMDGGT CCCCCEEECCCCCHHHHCCCEEEEEECHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCC AQPHIPLGVLAPVLRPEFGGA CCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA