| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406212
Identifier: 41406212
GI number: 41406212
Start: 125030
End: 125626
Strand: Direct
Name: 41406212
Synonym: MAP0114
Alternate gene names: NA
Gene position: 125030-125626 (Clockwise)
Preceding gene: 41406211
Following gene: 41406213
Centisome position: 2.59
GC content: 66.5
Gene sequence:
>597_bases GTGACCGTCACCGCCGACCAGGAACGCGCCACCGCCGACGATGTCGAGCAGCCGCCCGACGATGACCGAAAAACCACGGC GGACCGTACCGAATCTCAGCCGAAAACCGCGGCGCGGCAATGGAAACGGTACGGTCGCGCCGCGCTCGTCGTCGCCGTCT ACGCGGGCGCATTCGGCCTGGCCGCGGGGCTGGGCTGGAAACTGTGGGACCAGCGTGCGGTGGCCCAGGCCGGGCAGGCG GCGCAGCGCACCGCGGTCGACTATGCCCAGGTGCTGACGAGCATCGACGCCAACCAGGTGGACCAGAACTTCGCGGCCGT GCTCGGCGGAGCCACCGGCGAGTTCAAAGACACCTACACAAAAGCCAGTGCGCAGCTTCGGCAATTGCTCATCGACAACA AGGCCACGGCGCACGGCACGGTGGTGGACTCGGCGATCCAATCGCAGAGCAGGAACAGGGTGGTGGTGTTGCTGATGGTG GACCAGACGGTCAGCAATACGGTGCGACCCGACGGCCGCGTCGACCGCAGCCGGATGAAGATCACCATGGAAAATGTCGG CGGCCGCTGGCTGGCCAGCAAAGTCGAACTGCCGTAA
Upstream 100 bases:
>100_bases CCCAAGGGCCGCTTCACCATTCCGACGCCCTACGGCGGGCCGGTGCTGCCCATCGAGCCGCCGCACTGAACCCACCTCAA GACCGCAAGGAGACAACAGC
Downstream 100 bases:
>100_bases GGCGTTTCGGGCGATGCGCATCTTCCAGTTCTCGGCCGGCGCGGCGGCGGTGACGATGGCGGCGCTCACCGCACCCGTGG CGTCGGCGTCGGCGCAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MTVTADQERATADDVEQPPDDDRKTTADRTESQPKTAARQWKRYGRAALVVAVYAGAFGLAAGLGWKLWDQRAVAQAGQA AQRTAVDYAQVLTSIDANQVDQNFAAVLGGATGEFKDTYTKASAQLRQLLIDNKATAHGTVVDSAIQSQSRNRVVVLLMV DQTVSNTVRPDGRVDRSRMKITMENVGGRWLASKVELP
Sequences:
>Translated_198_residues MTVTADQERATADDVEQPPDDDRKTTADRTESQPKTAARQWKRYGRAALVVAVYAGAFGLAAGLGWKLWDQRAVAQAGQA AQRTAVDYAQVLTSIDANQVDQNFAAVLGGATGEFKDTYTKASAQLRQLLIDNKATAHGTVVDSAIQSQSRNRVVVLLMV DQTVSNTVRPDGRVDRSRMKITMENVGGRWLASKVELP >Mature_197_residues TVTADQERATADDVEQPPDDDRKTTADRTESQPKTAARQWKRYGRAALVVAVYAGAFGLAAGLGWKLWDQRAVAQAGQAA QRTAVDYAQVLTSIDANQVDQNFAAVLGGATGEFKDTYTKASAQLRQLLIDNKATAHGTVVDSAIQSQSRNRVVVLLMVD QTVSNTVRPDGRVDRSRMKITMENVGGRWLASKVELP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21505; Mature: 21374
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTADQERATADDVEQPPDDDRKTTADRTESQPKTAARQWKRYGRAALVVAVYAGAFGL CCCCCCCCCCCHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHH AAGLGWKLWDQRAVAQAGQAAQRTAVDYAQVLTSIDANQVDQNFAAVLGGATGEFKDTYT HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHH KASAQLRQLLIDNKATAHGTVVDSAIQSQSRNRVVVLLMVDQTVSNTVRPDGRVDRSRMK HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHCCCCCCCCCHHHHE ITMENVGGRWLASKVELP EEHHHCCCEEECCCCCCC >Mature Secondary Structure TVTADQERATADDVEQPPDDDRKTTADRTESQPKTAARQWKRYGRAALVVAVYAGAFGL CCCCCCCCCCHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHH AAGLGWKLWDQRAVAQAGQAAQRTAVDYAQVLTSIDANQVDQNFAAVLGGATGEFKDTYT HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHH KASAQLRQLLIDNKATAHGTVVDSAIQSQSRNRVVVLLMVDQTVSNTVRPDGRVDRSRMK HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHCCCCCCCCCHHHHE ITMENVGGRWLASKVELP EEHHHCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA