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The map label for this gene is ydhO [C]

Identifier: 41406134

GI number: 41406134

Start: 42180

End: 43004

Strand: Direct

Name: ydhO [C]

Synonym: MAP0036

Alternate gene names: 41406134

Gene position: 42180-43004 (Clockwise)

Preceding gene: 41406133

Following gene: 41406135

Centisome position: 0.87

GC content: 72.24

Gene sequence:

>825_bases
GTGAGCCACAGCGAACTCGAGGCGTTGAGCCGTGCTCATCAACTTTTCGCCGGCGGCACGCGGCCCGCATCCCTGGACAC
CGGAAGTGGGCACTACCGCGACCTGTTGGGGCGAGCGGCCCGGCTGAGCGACGGATTCGCGCACGGCGGCTACCGGCTCG
CGGTGCAGCACAGCCGGCAACGCCTGGCGTCGACGTCGGACACGGACGCCGCGGTGACCGACCTGCTGGCCGGCGCGCAC
CGAGACCGGGCGCAGGCTCGCGAGCTGACCGGCGCCGTGCTCGATGCCGGCCGCGCCGACGCCGCGAATCCGACGACGCC
GTTGGCTCAGCGCGAGGCGATGCGGCGCCGGGTGATGCGGCTGCGGACCCAACATGCCCACGTGGTGTCGGCGGCAGCGC
GAGCCCGACACCACCATGCCCGGCTGCTGGCCCTGCGGTACCGGCTGCGGCACGGTGTCGGGCTGGCCGGCCTGCGCGGG
CCGGGCAGCGACCGCGCGGCGCTCGCGGTGCGGGCCGCGTTGTCACGGCTCGGCCGCCCATACGTGTGGGGGGCCACCGG
TCCCGACCAGTTCGACTGCTCCGGCCTGGTGCAGTGGAGCTACGCGCAGGCCGGAATTCATTTGGACCGCACCACCTATC
AACAGATCAACGAGGGCATCCCGGTGCCGCGGTCGCAGGTGCGGCCGGGTGATCTGGTGTTTCCCCACGCCGGCCACGTG
CAGCTCGCGATCGGCAACAACCTCGTCGTCGAGGCGCCCTACTCGGGCGCCTCGGTGCGAATCAGCCGGCTGGGCAACAA
CGTTGCGATACGCCGACCGATATGA

Upstream 100 bases:

>100_bases
TCATCTCGCCGAGCGCCCTCCCCCGGGTGCGTGCCTTCACCGACGCGGTCGAGTCGGCGAGCCGGAATGGGGCGAGCCGG
GGCGACGACGAGGAGGGGTC

Downstream 100 bases:

>100_bases
CCTGCCAACATCGCCCGGCCCAGCGGGCACGACGAAAAGGGTGAGCCGATGCCGGAACAACCCGAATACTCGTTAGAGGC
CGTCGAGGCGCGGCGATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSHSELEALSRAHQLFAGGTRPASLDTGSGHYRDLLGRAARLSDGFAHGGYRLAVQHSRQRLASTSDTDAAVTDLLAGAH
RDRAQARELTGAVLDAGRADAANPTTPLAQREAMRRRVMRLRTQHAHVVSAAARARHHHARLLALRYRLRHGVGLAGLRG
PGSDRAALAVRAALSRLGRPYVWGATGPDQFDCSGLVQWSYAQAGIHLDRTTYQQINEGIPVPRSQVRPGDLVFPHAGHV
QLAIGNNLVVEAPYSGASVRISRLGNNVAIRRPI

Sequences:

>Translated_274_residues
MSHSELEALSRAHQLFAGGTRPASLDTGSGHYRDLLGRAARLSDGFAHGGYRLAVQHSRQRLASTSDTDAAVTDLLAGAH
RDRAQARELTGAVLDAGRADAANPTTPLAQREAMRRRVMRLRTQHAHVVSAAARARHHHARLLALRYRLRHGVGLAGLRG
PGSDRAALAVRAALSRLGRPYVWGATGPDQFDCSGLVQWSYAQAGIHLDRTTYQQINEGIPVPRSQVRPGDLVFPHAGHV
QLAIGNNLVVEAPYSGASVRISRLGNNVAIRRPI
>Mature_273_residues
SHSELEALSRAHQLFAGGTRPASLDTGSGHYRDLLGRAARLSDGFAHGGYRLAVQHSRQRLASTSDTDAAVTDLLAGAHR
DRAQARELTGAVLDAGRADAANPTTPLAQREAMRRRVMRLRTQHAHVVSAAARARHHHARLLALRYRLRHGVGLAGLRGP
GSDRAALAVRAALSRLGRPYVWGATGPDQFDCSGLVQWSYAQAGIHLDRTTYQQINEGIPVPRSQVRPGDLVFPHAGHVQ
LAIGNNLVVEAPYSGASVRISRLGNNVAIRRPI

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787944, Length=110, Percent_Identity=31.8181818181818, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786421, Length=109, Percent_Identity=36.697247706422, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 29549; Mature: 29418

Theoretical pI: Translated: 11.89; Mature: 11.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSELEALSRAHQLFAGGTRPASLDTGSGHYRDLLGRAARLSDGFAHGGYRLAVQHSRQ
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHH
RLASTSDTDAAVTDLLAGAHRDRAQARELTGAVLDAGRADAANPTTPLAQREAMRRRVMR
HHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
LRTQHAHVVSAAARARHHHARLLALRYRLRHGVGLAGLRGPGSDRAALAVRAALSRLGRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
YVWGATGPDQFDCSGLVQWSYAQAGIHLDRTTYQQINEGIPVPRSQVRPGDLVFPHAGHV
EEECCCCCCCCCCCCEEEEEHHHCCEEECHHHHHHHHCCCCCCCCCCCCCCEECCCCCEE
QLAIGNNLVVEAPYSGASVRISRLGNNVAIRRPI
EEEECCCEEEECCCCCCEEEEEECCCCEEEECCC
>Mature Secondary Structure 
SHSELEALSRAHQLFAGGTRPASLDTGSGHYRDLLGRAARLSDGFAHGGYRLAVQHSRQ
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHH
RLASTSDTDAAVTDLLAGAHRDRAQARELTGAVLDAGRADAANPTTPLAQREAMRRRVMR
HHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
LRTQHAHVVSAAARARHHHARLLALRYRLRHGVGLAGLRGPGSDRAALAVRAALSRLGRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
YVWGATGPDQFDCSGLVQWSYAQAGIHLDRTTYQQINEGIPVPRSQVRPGDLVFPHAGHV
EEECCCCCCCCCCCCEEEEEHHHCCEEECHHHHHHHHCCCCCCCCCCCCCCEECCCCCEE
QLAIGNNLVVEAPYSGASVRISRLGNNVAIRRPI
EEEECCCEEEECCCCCCEEEEEECCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]