| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406135
Identifier: 41406135
GI number: 41406135
Start: 43053
End: 43415
Strand: Direct
Name: 41406135
Synonym: MAP0037
Alternate gene names: NA
Gene position: 43053-43415 (Clockwise)
Preceding gene: 41406134
Following gene: 41406136
Centisome position: 0.89
GC content: 68.32
Gene sequence:
>363_bases ATGCCGGAACAACCCGAATACTCGTTAGAGGCCGTCGAGGCGCGGCGATCGGCGCTGGCCGATCAGCACGGCGCGGCGTC GGAAGCCGACCGTGTGCTCGCCGAGGTGCTCGCCAGTGCTCACGCGGCGGCGCAGGAGAGCGCCCGGCGGCTGGACGCCA GCGCCGAGCAGATCGACCGCGCCGTGGCGCATCAAGCGGATCTGGCCATCGATACGCCGCTGGGCGCGCGGGAGTTCCAC AAGTTTCTGCTCGCCAAGCAGCACGAGATCGCGTCGGTGGTCACCGAGGCCCAGGAACTCGGCAGGGCGAAAAGGGTTGT GTTGGAGAATCTTCGGGCGCAGTACAGCGCCGGCAACAGGTGA
Upstream 100 bases:
>100_bases GGTGCGAATCAGCCGGCTGGGCAACAACGTTGCGATACGCCGACCGATATGACCTGCCAACATCGCCCGGCCCAGCGGGC ACGACGAAAAGGGTGAGCCG
Downstream 100 bases:
>100_bases GCAAAATTAGTCCACACCGTGGGAGCGCAGTGAATTGTCGGCAGCAACACTCCTGAGTACTGTCGCCGGGCATGGAGGGG TCGCGTCAGGGGCTGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MPEQPEYSLEAVEARRSALADQHGAASEADRVLAEVLASAHAAAQESARRLDASAEQIDRAVAHQADLAIDTPLGAREFH KFLLAKQHEIASVVTEAQELGRAKRVVLENLRAQYSAGNR
Sequences:
>Translated_120_residues MPEQPEYSLEAVEARRSALADQHGAASEADRVLAEVLASAHAAAQESARRLDASAEQIDRAVAHQADLAIDTPLGAREFH KFLLAKQHEIASVVTEAQELGRAKRVVLENLRAQYSAGNR >Mature_119_residues PEQPEYSLEAVEARRSALADQHGAASEADRVLAEVLASAHAAAQESARRLDASAEQIDRAVAHQADLAIDTPLGAREFHK FLLAKQHEIASVVTEAQELGRAKRVVLENLRAQYSAGNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv0026 and Rv0739 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019710 [H]
Pfam domain/function: PF10774 BssS [H]
EC number: NA
Molecular weight: Translated: 13009; Mature: 12877
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEQPEYSLEAVEARRSALADQHGAASEADRVLAEVLASAHAAAQESARRLDASAEQIDR CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAHQADLAIDTPLGAREFHKFLLAKQHEIASVVTEAQELGRAKRVVLENLRAQYSAGNR HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PEQPEYSLEAVEARRSALADQHGAASEADRVLAEVLASAHAAAQESARRLDASAEQIDR CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAHQADLAIDTPLGAREFHKFLLAKQHEIASVVTEAQELGRAKRVVLENLRAQYSAGNR HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]