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The map label for this gene is yraM [C]

Identifier: 52843188

GI number: 52843188

Start: 3384402

End: 3386213

Strand: Reverse

Name: yraM [C]

Synonym: lpg2995

Alternate gene names: 52843188

Gene position: 3386213-3384402 (Counterclockwise)

Preceding gene: 52843191

Following gene: 52843187

Centisome position: 99.66

GC content: 40.23

Gene sequence:

>1812_bases
ATGTTAATTAAACAATTAAAACTTCGCATGTTCTTAGTATTGGTATCTCTTTTTTTGCTTTGCCAATGCACAAAAACAGT
TAACTCAACCGAGCCTGTAGTAACAGTTAATAAAAAATTAAAATCTCCATATTCATTACCTACTGCAGCATACTTGGCTA
TGGCTAAGAATCAACAAGGCCATGAAAAGCAAAGCGCATTGATTTCCGCAGCTGGCCGTTTAATTACTGATGGTCAATGG
AAGCAAGGAACTGCCATTTTAGCACAAACTGGGGAATTAACAGTTGAGCAAGCTAATGAAAAGAATCTTTTACTGGCAAA
AGTCGACATTATGCGTGATAGGCCCAGAGATGCCTTAGCCAAGTTAGCTAGAATTAAAGAACCTGAAAGACTCTCGTTAT
ATAATCAAATCCAATTTCACGAACAATTGGCGAAGTCATTTCGGTCCATTGGTAGTTACTCTGAATCAGTTAGTGAGCGT
ATCAAGTTAGAATCATTGCTCCCTGATGAGGAAAATCAGGTCAATAATCGGCGGGCTTTGTGGTTGACCTTAACCAGTTT
ACCTCAAGAGGAGCTGAATACAATGGCTCTGGAGGCTGTGAACAAATCAGAAATGCAAGGCTGGTTGCAGCTGGCTGTTA
TTTCCCGTAAGTATAGAAATAACTCAAAGTCGTTGCTGGCTGCCTTGGATCAATGGCAGATGCATTTTAGTAATCATCCA
GCAAATCAGATTTTGCCTAATCCCTTAGACAGCATATCAGGTAAATTATTAGCTCCACCTAAACAGGTTGCTTTGTTATT
GCCTTTAAGTGGTCCATTATCCGGGCCGGGTAATGCTATACGGGAAGGCTTTATGGCAGCCTATAAGGCCAACAGGGGAG
ATGAATCAACAAAAATTAAAGTTTATGATACAAGCAAAGACGATATAACGAACACATATCGCCAAGCTATTTCTGACGGT
GCCGAATATGTTGTTGGTCCTTTAACGAAAACTCAAGTCGCTACCATTGCATCAATGGAGCATCCGGTTCCTACCCTATT
GCTAAACGATACGGATACCAGCACACAAAGCAATTCTTATTCCTTAGGCTTATCCCCTGTTAATGAAGCGATTCAGGTTG
CAATAAAAGCAAGAAGCAAAGGATATAAAAAAGCGCTGATTATTGCCCCCAATAATGCTTGGGGTAATGAAGTAACGAAA
GCTTTTATCAATCAGTGGAATGAAGATGGGGGCCATATTGTTGACTCTCTTCGCTACGAAGCCAAACAAGATTTGAATAA
GAGCATGAAAGATTTTTTACAAATCACCAATAGCCAGGAGCGCGAGAAAAAACTAAAGCAGGTATTAGGCTATAATTTCC
AATCGACTACGAGCCGAAGACAGGATTTTGATATGATATTTTTATTGGCTTATCCTTCCAAGGCCCGCCAAATTATGCCT
TTATTAAAATATTATTATGCCGGAGATGCTCCTGTGTACGCTACTTCAAGTGTTTATGGCGGTAGCGCCAATGCTTTGAA
GGATAAGGATTTGGATGGGATCATTTTCTGCGATATGCCTTGGGTATTTTCTCATCAGATGGGAACGAAAAACTGGCCTG
AACAATTCAATAGCTATAACAGGCTTTATGCTTTAGGCGTGGACAGTTATACCTTGGCTACCCAATTAAACCAACTGATA
TTATTTCCAGCCGATGGCTCTAACGATTCAACAGGTATTTTATATTTAAAGCCGACTCAACAAGTAGCCAGGGTTCTTGA
ATGGGGGCAATTTAAAAAGGGTTTAGCCCATTCACTAGGGGATACTGTTTAG

Upstream 100 bases:

>100_bases
TTCCTATTGGGGTAGCAACTATATAGAGAGTTCCTAAACCTGTTGCTAGAGTGTTTGTCATAGTTTATCCTCTTGCGAAA
AGCAAATTTGGCGAATTAAC

Downstream 100 bases:

>100_bases
TTTTGAAGTGAGCCAAGAATAATGACCCAAGAAAAAGGAAAGTTTGCTGAACAATTGGCTTTAAATTACTTAAAGGAAAA
TGGTCTTGCATTAGTAATGC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 603; Mature: 603

Protein sequence:

>603_residues
MLIKQLKLRMFLVLVSLFLLCQCTKTVNSTEPVVTVNKKLKSPYSLPTAAYLAMAKNQQGHEKQSALISAAGRLITDGQW
KQGTAILAQTGELTVEQANEKNLLLAKVDIMRDRPRDALAKLARIKEPERLSLYNQIQFHEQLAKSFRSIGSYSESVSER
IKLESLLPDEENQVNNRRALWLTLTSLPQEELNTMALEAVNKSEMQGWLQLAVISRKYRNNSKSLLAALDQWQMHFSNHP
ANQILPNPLDSISGKLLAPPKQVALLLPLSGPLSGPGNAIREGFMAAYKANRGDESTKIKVYDTSKDDITNTYRQAISDG
AEYVVGPLTKTQVATIASMEHPVPTLLLNDTDTSTQSNSYSLGLSPVNEAIQVAIKARSKGYKKALIIAPNNAWGNEVTK
AFINQWNEDGGHIVDSLRYEAKQDLNKSMKDFLQITNSQEREKKLKQVLGYNFQSTTSRRQDFDMIFLLAYPSKARQIMP
LLKYYYAGDAPVYATSSVYGGSANALKDKDLDGIIFCDMPWVFSHQMGTKNWPEQFNSYNRLYALGVDSYTLATQLNQLI
LFPADGSNDSTGILYLKPTQQVARVLEWGQFKKGLAHSLGDTV

Sequences:

>Translated_603_residues
MLIKQLKLRMFLVLVSLFLLCQCTKTVNSTEPVVTVNKKLKSPYSLPTAAYLAMAKNQQGHEKQSALISAAGRLITDGQW
KQGTAILAQTGELTVEQANEKNLLLAKVDIMRDRPRDALAKLARIKEPERLSLYNQIQFHEQLAKSFRSIGSYSESVSER
IKLESLLPDEENQVNNRRALWLTLTSLPQEELNTMALEAVNKSEMQGWLQLAVISRKYRNNSKSLLAALDQWQMHFSNHP
ANQILPNPLDSISGKLLAPPKQVALLLPLSGPLSGPGNAIREGFMAAYKANRGDESTKIKVYDTSKDDITNTYRQAISDG
AEYVVGPLTKTQVATIASMEHPVPTLLLNDTDTSTQSNSYSLGLSPVNEAIQVAIKARSKGYKKALIIAPNNAWGNEVTK
AFINQWNEDGGHIVDSLRYEAKQDLNKSMKDFLQITNSQEREKKLKQVLGYNFQSTTSRRQDFDMIFLLAYPSKARQIMP
LLKYYYAGDAPVYATSSVYGGSANALKDKDLDGIIFCDMPWVFSHQMGTKNWPEQFNSYNRLYALGVDSYTLATQLNQLI
LFPADGSNDSTGILYLKPTQQVARVLEWGQFKKGLAHSLGDTV
>Mature_603_residues
MLIKQLKLRMFLVLVSLFLLCQCTKTVNSTEPVVTVNKKLKSPYSLPTAAYLAMAKNQQGHEKQSALISAAGRLITDGQW
KQGTAILAQTGELTVEQANEKNLLLAKVDIMRDRPRDALAKLARIKEPERLSLYNQIQFHEQLAKSFRSIGSYSESVSER
IKLESLLPDEENQVNNRRALWLTLTSLPQEELNTMALEAVNKSEMQGWLQLAVISRKYRNNSKSLLAALDQWQMHFSNHP
ANQILPNPLDSISGKLLAPPKQVALLLPLSGPLSGPGNAIREGFMAAYKANRGDESTKIKVYDTSKDDITNTYRQAISDG
AEYVVGPLTKTQVATIASMEHPVPTLLLNDTDTSTQSNSYSLGLSPVNEAIQVAIKARSKGYKKALIIAPNNAWGNEVTK
AFINQWNEDGGHIVDSLRYEAKQDLNKSMKDFLQITNSQEREKKLKQVLGYNFQSTTSRRQDFDMIFLLAYPSKARQIMP
LLKYYYAGDAPVYATSSVYGGSANALKDKDLDGIIFCDMPWVFSHQMGTKNWPEQFNSYNRLYALGVDSYTLATQLNQLI
LFPADGSNDSTGILYLKPTQQVARVLEWGQFKKGLAHSLGDTV

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yraM [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=320, Percent_Identity=25.625, Blast_Score=97, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 67325; Mature: 67325

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKQLKLRMFLVLVSLFLLCQCTKTVNSTEPVVTVNKKLKSPYSLPTAAYLAMAKNQQG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHCCCCCCCHHHHHHHHCCCCC
HEKQSALISAAGRLITDGQWKQGTAILAQTGELTVEQANEKNLLLAKVDIMRDRPRDALA
CHHHHHHHHHHCCCEECCCCCCCCEEEEECCCEEEECCCCCCEEEEEEHHHHCCCHHHHH
KLARIKEPERLSLYNQIQFHEQLAKSFRSIGSYSESVSERIKLESLLPDEENQVNNRRAL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEE
WLTLTSLPQEELNTMALEAVNKSEMQGWLQLAVISRKYRNNSKSLLAALDQWQMHFSNHP
EEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
ANQILPNPLDSISGKLLAPPKQVALLLPLSGPLSGPGNAIREGFMAAYKANRGDESTKIK
CHHCCCCCHHHHCCCEECCHHHEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE
VYDTSKDDITNTYRQAISDGAEYVVGPLTKTQVATIASMEHPVPTLLLNDTDTSTQSNSY
EEECCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCE
SLGLSPVNEAIQVAIKARSKGYKKALIIAPNNAWGNEVTKAFINQWNEDGGHIVDSLRYE
EECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
AKQDLNKSMKDFLQITNSQEREKKLKQVLGYNFQSTTSRRQDFDMIFLLAYPSKARQIMP
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH
LLKYYYAGDAPVYATSSVYGGSANALKDKDLDGIIFCDMPWVFSHQMGTKNWPEQFNSYN
HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCHHHHCCCC
RLYALGVDSYTLATQLNQLILFPADGSNDSTGILYLKPTQQVARVLEWGQFKKGLAHSLG
EEEEECCCCHHHHHCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCC
DTV
CCC
>Mature Secondary Structure
MLIKQLKLRMFLVLVSLFLLCQCTKTVNSTEPVVTVNKKLKSPYSLPTAAYLAMAKNQQG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHCCCCCCCHHHHHHHHCCCCC
HEKQSALISAAGRLITDGQWKQGTAILAQTGELTVEQANEKNLLLAKVDIMRDRPRDALA
CHHHHHHHHHHCCCEECCCCCCCCEEEEECCCEEEECCCCCCEEEEEEHHHHCCCHHHHH
KLARIKEPERLSLYNQIQFHEQLAKSFRSIGSYSESVSERIKLESLLPDEENQVNNRRAL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEE
WLTLTSLPQEELNTMALEAVNKSEMQGWLQLAVISRKYRNNSKSLLAALDQWQMHFSNHP
EEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
ANQILPNPLDSISGKLLAPPKQVALLLPLSGPLSGPGNAIREGFMAAYKANRGDESTKIK
CHHCCCCCHHHHCCCEECCHHHEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE
VYDTSKDDITNTYRQAISDGAEYVVGPLTKTQVATIASMEHPVPTLLLNDTDTSTQSNSY
EEECCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCE
SLGLSPVNEAIQVAIKARSKGYKKALIIAPNNAWGNEVTKAFINQWNEDGGHIVDSLRYE
EECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
AKQDLNKSMKDFLQITNSQEREKKLKQVLGYNFQSTTSRRQDFDMIFLLAYPSKARQIMP
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH
LLKYYYAGDAPVYATSSVYGGSANALKDKDLDGIIFCDMPWVFSHQMGTKNWPEQFNSYN
HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCHHHHCCCC
RLYALGVDSYTLATQLNQLILFPADGSNDSTGILYLKPTQQVARVLEWGQFKKGLAHSLG
EEEEECCCCHHHHHCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCC
DTV
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]