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The map label for this gene is yraN [C]

Identifier: 52843187

GI number: 52843187

Start: 3384024

End: 3384380

Strand: Reverse

Name: yraN [C]

Synonym: lpg2994

Alternate gene names: 52843187

Gene position: 3384380-3384024 (Counterclockwise)

Preceding gene: 52843188

Following gene: 52843186

Centisome position: 99.61

GC content: 34.45

Gene sequence:

>357_bases
ATGACCCAAGAAAAAGGAAAGTTTGCTGAACAATTGGCTTTAAATTACTTAAAGGAAAATGGTCTTGCATTAGTAATGCA
AAACTATCATTGCCGTTTAGGAGAAATTGATTTAATTATGCGTGAGGGATCTTATCTGGTTTTTGTTGAGGTCCGTTCGC
GTTCAAATATGAACTTTGGTGGGGGGCTTGCCAGCATTACTTACGAAAAGAAACAAAAAATAATAAAAGCAACTTCTCAT
TATATGATTAAGTATCGCATACAAGATAAATTTCCTATACGGTTTGATGTGATTAGTATAGATGGAAAATCAAACAAGAT
TACCTGGTTAAAGAACGCATTTGATGCAGGATGCTAG

Upstream 100 bases:

>100_bases
GACTCAACAAGTAGCCAGGGTTCTTGAATGGGGGCAATTTAAAAAGGGTTTAGCCCATTCACTAGGGGATACTGTTTAGT
TTTGAAGTGAGCCAAGAATA

Downstream 100 bases:

>100_bases
GAAGATAATGAATAGAAGGTTTTGAAATGATTCAGTTAGAAGAAAGAGTAAGGCATTTATTTGGTGTCACAATAGAAGCA
AAAATATCAGCAGCTGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTQEKGKFAEQLALNYLKENGLALVMQNYHCRLGEIDLIMREGSYLVFVEVRSRSNMNFGGGLASITYEKKQKIIKATSH
YMIKYRIQDKFPIRFDVISIDGKSNKITWLKNAFDAGC

Sequences:

>Translated_118_residues
MTQEKGKFAEQLALNYLKENGLALVMQNYHCRLGEIDLIMREGSYLVFVEVRSRSNMNFGGGLASITYEKKQKIIKATSH
YMIKYRIQDKFPIRFDVISIDGKSNKITWLKNAFDAGC
>Mature_117_residues
TQEKGKFAEQLALNYLKENGLALVMQNYHCRLGEIDLIMREGSYLVFVEVRSRSNMNFGGGLASITYEKKQKIIKATSHY
MIKYRIQDKFPIRFDVISIDGKSNKITWLKNAFDAGC

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=115, Percent_Identity=37.3913043478261, Blast_Score=83, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2994_LEGPH (Q5ZR89)

Other databases:

- EMBL:   AE017354
- RefSeq:   YP_096986.1
- ProteinModelPortal:   Q5ZR89
- STRING:   Q5ZR89
- GeneID:   3080025
- GenomeReviews:   AE017354_GR
- KEGG:   lpn:lpg2994
- NMPDR:   fig|272624.3.peg.2931
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   QWLKNAF
- ProtClustDB:   PRK12497
- BioCyc:   LPNE272624:LPG2994-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13591; Mature: 13460

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQEKGKFAEQLALNYLKENGLALVMQNYHCRLGEIDLIMREGSYLVFVEVRSRSNMNFG
CCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCCCCCC
GGLASITYEKKQKIIKATSHYMIKYRIQDKFPIRFDVISIDGKSNKITWLKNAFDAGC
CCEEEEEHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
TQEKGKFAEQLALNYLKENGLALVMQNYHCRLGEIDLIMREGSYLVFVEVRSRSNMNFG
CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCCCCCC
GGLASITYEKKQKIIKATSHYMIKYRIQDKFPIRFDVISIDGKSNKITWLKNAFDAGC
CCEEEEEHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA