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The map label for this gene is 52843133

Identifier: 52843133

GI number: 52843133

Start: 3324704

End: 3325876

Strand: Reverse

Name: 52843133

Synonym: lpg2939

Alternate gene names: NA

Gene position: 3325876-3324704 (Counterclockwise)

Preceding gene: 52843134

Following gene: 52843132

Centisome position: 97.88

GC content: 33.25

Gene sequence:

>1173_bases
ATGAAAATGAATATTTTTCAAATGTTGATGTCATCAAAAAATCATCTGGTTTATTTAGGATGGTTAATAATAGTTTTTTT
TATTGGCTTGCTAACTTCTAAGGCCCCTAAAAATTGCGCATTTGAATTATCTCAACCTATTAAGATAGAAAATAACACAA
ATGCCAATCCTGTTTATATAAGAGAAAAATTACCTATGCCAAAAGGTATTAAAAAGGCACATTCTGCTACATTGACTAAA
GTTGATGACAGTCATTTGCTCGCCATGTATTTTGCTGGGAGTCGTGAGGGAGGACCTGATGTTAAAATTTATAGCTCTAT
TTATGATATCCATAGAAATAAATGGTCAACCCCCAAAATAGTGCTGACTCGAGAGAAACTGCGCAAGAATAGCCATCAAT
TGATTAGAAAATTAGGTAATCCTGTTATTTATAATCAAAATGGCAAGTTGCATTTGTTTGTTGTTGCAACTGCTTTTGCA
GGTTGGGCGGCTAGCAAAATTTATCATTTTGAGTCATTAGATAAAGGGAAGAGTTTCAACTATAAAGCTACCTTGTATTT
AAGTCCCTTTTTTAATTTAAGTACCTTAATCAGAGCATCCCCCCTTCCATTAGTAGATGGTGGTTTTTTTTTGCCAGCAT
ACCATGAATTAGAAAGCAAATATCCTTTAATGCTCCGGTTTGATAAAAAAGGGAGCTATACAGAAAGCATTCAAATCAAT
CACATTGGGGGGCAATTACAGCCATCAATCATTCCCCTTTCAAGCTTGAATTGCTTAGCTGGATTTCGTAATGCTAATAA
AACAGATCACTGGATGCGGATCCAATATTGCCAGGAAGGAGGACTTTCATGGCTTGATCCCCAAAAAACGAATATTAAAA
ATATGAATAATTCTATTAATTTATTTAATTTTAATTCAGAGGTATTTTTAGTCCATAACAGAACGCATAAAAATAATATC
AAAGGCCAACTTGTGTTATCCAGAATGGAGAATTCGACCGGAATATTTTCGTATCTGTTTACTTTGGATACGGGTGAAAT
TAACAATAAAAGTGTTACTTACCCTTCTACATTAGTGGATAGAGGTTATGTTGATATTATCTATGACAAAAATGCGAATG
AGGTCATTCATATACGTTTTAATAAATATTACCTGGATAGTTTGAAAAAATGA

Upstream 100 bases:

>100_bases
AAAAATTAATTTTGGAATATCCGGAGCAATGGTGGTGGGTTCATAGACGATGGAAATTATAAGCTAAAAATGTAAAGAAA
CCCAAATATTATTTTACAAA

Downstream 100 bases:

>100_bases
CTGCATTAATTTATAGCAAATTGTTTTATTCAATCTGTATATGCTATTTTATCCTTAACAGGATAAAAGCAACTTCATTA
AGAAACGCTCTAGTTTTTAT

Product: BNR/Asp box repeat-containing protein

Products: NA

Alternate protein names: Neuraminidase; BNR/Asp-Box Repeat Protein; BNR Repeat-Containing Glycosyl Hydrolase; Inner Membrane Protein; BNR/Asp Box Repeat-Containing Protein

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MKMNIFQMLMSSKNHLVYLGWLIIVFFIGLLTSKAPKNCAFELSQPIKIENNTNANPVYIREKLPMPKGIKKAHSATLTK
VDDSHLLAMYFAGSREGGPDVKIYSSIYDIHRNKWSTPKIVLTREKLRKNSHQLIRKLGNPVIYNQNGKLHLFVVATAFA
GWAASKIYHFESLDKGKSFNYKATLYLSPFFNLSTLIRASPLPLVDGGFFLPAYHELESKYPLMLRFDKKGSYTESIQIN
HIGGQLQPSIIPLSSLNCLAGFRNANKTDHWMRIQYCQEGGLSWLDPQKTNIKNMNNSINLFNFNSEVFLVHNRTHKNNI
KGQLVLSRMENSTGIFSYLFTLDTGEINNKSVTYPSTLVDRGYVDIIYDKNANEVIHIRFNKYYLDSLKK

Sequences:

>Translated_390_residues
MKMNIFQMLMSSKNHLVYLGWLIIVFFIGLLTSKAPKNCAFELSQPIKIENNTNANPVYIREKLPMPKGIKKAHSATLTK
VDDSHLLAMYFAGSREGGPDVKIYSSIYDIHRNKWSTPKIVLTREKLRKNSHQLIRKLGNPVIYNQNGKLHLFVVATAFA
GWAASKIYHFESLDKGKSFNYKATLYLSPFFNLSTLIRASPLPLVDGGFFLPAYHELESKYPLMLRFDKKGSYTESIQIN
HIGGQLQPSIIPLSSLNCLAGFRNANKTDHWMRIQYCQEGGLSWLDPQKTNIKNMNNSINLFNFNSEVFLVHNRTHKNNI
KGQLVLSRMENSTGIFSYLFTLDTGEINNKSVTYPSTLVDRGYVDIIYDKNANEVIHIRFNKYYLDSLKK
>Mature_390_residues
MKMNIFQMLMSSKNHLVYLGWLIIVFFIGLLTSKAPKNCAFELSQPIKIENNTNANPVYIREKLPMPKGIKKAHSATLTK
VDDSHLLAMYFAGSREGGPDVKIYSSIYDIHRNKWSTPKIVLTREKLRKNSHQLIRKLGNPVIYNQNGKLHLFVVATAFA
GWAASKIYHFESLDKGKSFNYKATLYLSPFFNLSTLIRASPLPLVDGGFFLPAYHELESKYPLMLRFDKKGSYTESIQIN
HIGGQLQPSIIPLSSLNCLAGFRNANKTDHWMRIQYCQEGGLSWLDPQKTNIKNMNNSINLFNFNSEVFLVHNRTHKNNI
KGQLVLSRMENSTGIFSYLFTLDTGEINNKSVTYPSTLVDRGYVDIIYDKNANEVIHIRFNKYYLDSLKK

Specific function: Unknown

COG id: COG4692

COG function: function code G; Predicted neuraminidase (sialidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44648; Mature: 44648

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMNIFQMLMSSKNHLVYLGWLIIVFFIGLLTSKAPKNCAFELSQPIKIENNTNANPVYI
CCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCCCEEEE
REKLPMPKGIKKAHSATLTKVDDSHLLAMYFAGSREGGPDVKIYSSIYDIHRNKWSTPKI
EECCCCCCCHHHHHCCEEEEECCCEEEEEEEECCCCCCCCEEEHHHHHHHHCCCCCCCEE
VLTREKLRKNSHQLIRKLGNPVIYNQNGKLHLFVVATAFAGWAASKIYHFESLDKGKSFN
EEEHHHHHCCHHHHHHHHCCCEEECCCCCEEEEEEEEHHCCHHHHHEEEECCCCCCCCCC
YKATLYLSPFFNLSTLIRASPLPLVDGGFFLPAYHELESKYPLMLRFDKKGSYTESIQIN
EEEEEEECCCCCHHHHHHCCCCCEECCCEECCCHHHHCCCCCEEEEECCCCCEEEEEEEE
HIGGQLQPSIIPLSSLNCLAGFRNANKTDHWMRIQYCQEGGLSWLDPQKTNIKNMNNSIN
ECCCCCCCCEEECCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEE
LFNFNSEVFLVHNRTHKNNIKGQLVLSRMENSTGIFSYLFTLDTGEINNKSVTYPSTLVD
EEEECCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCEEECCHHHHC
RGYVDIIYDKNANEVIHIRFNKYYLDSLKK
CCCEEEEEECCCCEEEEEEECCEEHHHHCC
>Mature Secondary Structure
MKMNIFQMLMSSKNHLVYLGWLIIVFFIGLLTSKAPKNCAFELSQPIKIENNTNANPVYI
CCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCCCEEEE
REKLPMPKGIKKAHSATLTKVDDSHLLAMYFAGSREGGPDVKIYSSIYDIHRNKWSTPKI
EECCCCCCCHHHHHCCEEEEECCCEEEEEEEECCCCCCCCEEEHHHHHHHHCCCCCCCEE
VLTREKLRKNSHQLIRKLGNPVIYNQNGKLHLFVVATAFAGWAASKIYHFESLDKGKSFN
EEEHHHHHCCHHHHHHHHCCCEEECCCCCEEEEEEEEHHCCHHHHHEEEECCCCCCCCCC
YKATLYLSPFFNLSTLIRASPLPLVDGGFFLPAYHELESKYPLMLRFDKKGSYTESIQIN
EEEEEEECCCCCHHHHHHCCCCCEECCCEECCCHHHHCCCCCEEEEECCCCCEEEEEEEE
HIGGQLQPSIIPLSSLNCLAGFRNANKTDHWMRIQYCQEGGLSWLDPQKTNIKNMNNSIN
ECCCCCCCCEEECCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEE
LFNFNSEVFLVHNRTHKNNIKGQLVLSRMENSTGIFSYLFTLDTGEINNKSVTYPSTLVD
EEEECCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCEEECCHHHHC
RGYVDIIYDKNANEVIHIRFNKYYLDSLKK
CCCEEEEEECCCCEEEEEEECCEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA