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The map label for this gene is recN

Identifier: 52843020

GI number: 52843020

Start: 3187409

End: 3189076

Strand: Direct

Name: recN

Synonym: lpg2824

Alternate gene names: 52843020

Gene position: 3187409-3189076 (Clockwise)

Preceding gene: 52843019

Following gene: 52843021

Centisome position: 93.81

GC content: 40.23

Gene sequence:

>1668_bases
ATGCTCACGACATTGCGCATTGAACATTTTGCTATTGTTAAACAACTGGAACTCGATTTTACACAAGGCATGACCACCTT
TACGGGCGAAACAGGCGCTGGCAAATCCATCATGATTGACGCCTTGCTGTTAGCATTAGGTGAAAAAGCAGATCCTTCTG
TAGTCCGCCCCGGCGAAGAAAAATGTGATATCACAGCCGGATTTTGTTTCGATGAATCATCAGAACTCGCTCAATGGTTG
GCTGAGCACGATATTTCTTGCCATGATGGTGAAATCTATCTAAGGCGCATTATTTACGCAGAAGGCCGCTCCAAATCTTA
TATTAATGGCCAACCTTTCCCTTTACAAAAAATAAAGGAGTTAAGTGAAAAACTGGTGCACATCCATGGGCAACACCAGC
ATCAAACACTCATGCAACATGCAACACATAGACAACAACTTGATCGCTATGCCAATAACCACCTCTTGTTAAATGATGTC
AATACACTCTATAAACAACATCAACAAATAGTACAAGAAATAAATGCATTACAAAGTCAGGAGCAACAAGCAGACCGCAT
TAAATTATTACAATTTCAAATTGATGAATTACAAGCGCTGGATATCCAGGATGGTGAACTGGAAGCCTTACATCAAGAGC
ATCAAATTTTGCATCATGCCAGAGAGTATCTGCAGTTAAGTCAACAGATCAATGAGCTATTGAATAGTGATGATCAACCG
AATATTTGCTCTGGTTTAAACCAGATTTTTCAACTCATCCAGCAACTCCCTCAAGAACAAGCGCAAATAAAAAACACAGC
TGAGTTAATTAATTCAGCCTTGATTCAATGTGAAGAAGCAATCACTGAAATGCAGCAATTCGCAGATAAAATTCAGCTGG
ATCCGGAAAGATTGCAAGAAGTGGAAGCCCGAATCAGCTCTATTCATCAACTAGCCCGGAAGTACCATCTTGATAGCAAA
TCGCTTCAGGAGCATGAAAAAACATTACAAAATGAATTGGAAAGTTTGCAAAATGTAGAAAGCAAATTGGCACATCTGCA
TTTGCAATTGGCTCAAATCAATAAGGTATATGAAAGCGCCGCATTAAAATTAAGTGAATCACGCAAAATTCACGCAAAAA
AACTGGCTCAAGAAATAACGGCCAGCATTCAGCAGTTAGGGATGCCAAAAGGATGGATTGAAATTGAAATCACTCCTTTA
GAAAAAATGCAAGCTCACGGATTGGATAAAGTGGAATACAAGGTATGTACTAACCCTGGGATGGAACCTGATTCATTGAA
CAAAATTGCCTCTGGCGGAGAATTATCCCGAATCAGTCTTGCAATACAGATGATTACAGCACAAAAAGGTTCAACTCCTA
CCTTATTATTTGATGAGGTCGATGTGGGTATTGGTGGCTCGACTGCTGCACTAGTTGGAAAAATGCTGAGAAAACTTGGA
GAAAGATTGCAGGTTTTTTGTGTTACCCACCAGCCGCAAGTTGCTGCCTCGGCACACCATCACTTTTTAGTCACCAAACA
TAGTAATAACAATCAAACTTTTACTCATATTTCATTGCTTAAAGCATCCGATAAAATTGCCGAGATCGCTCGCATGATGG
GTGGGCTCACTATAACAGAACAAACACTTTCTCATGCGAAAGAGCTGATATCGCTGAGCAATGAGTGA

Upstream 100 bases:

>100_bases
AAACGGTAATCGATTGCGTTTGTTACACCCTCTTGATTATCATTATTATGATACATTACGAAGCAAACTTGGTTGGGAAT
CAAAGCATCAGGGATAAAAC

Downstream 100 bases:

>100_bases
ACACGTCGATCATTTTCGGGTGAAATTTTACCAATCTATTGATTTAATTTCCTATTTTTTATACAAAATCTAAATTAATT
CAAAAAATTAAAAAAAAATT

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MLTTLRIEHFAIVKQLELDFTQGMTTFTGETGAGKSIMIDALLLALGEKADPSVVRPGEEKCDITAGFCFDESSELAQWL
AEHDISCHDGEIYLRRIIYAEGRSKSYINGQPFPLQKIKELSEKLVHIHGQHQHQTLMQHATHRQQLDRYANNHLLLNDV
NTLYKQHQQIVQEINALQSQEQQADRIKLLQFQIDELQALDIQDGELEALHQEHQILHHAREYLQLSQQINELLNSDDQP
NICSGLNQIFQLIQQLPQEQAQIKNTAELINSALIQCEEAITEMQQFADKIQLDPERLQEVEARISSIHQLARKYHLDSK
SLQEHEKTLQNELESLQNVESKLAHLHLQLAQINKVYESAALKLSESRKIHAKKLAQEITASIQQLGMPKGWIEIEITPL
EKMQAHGLDKVEYKVCTNPGMEPDSLNKIASGGELSRISLAIQMITAQKGSTPTLLFDEVDVGIGGSTAALVGKMLRKLG
ERLQVFCVTHQPQVAASAHHHFLVTKHSNNNQTFTHISLLKASDKIAEIARMMGGLTITEQTLSHAKELISLSNE

Sequences:

>Translated_555_residues
MLTTLRIEHFAIVKQLELDFTQGMTTFTGETGAGKSIMIDALLLALGEKADPSVVRPGEEKCDITAGFCFDESSELAQWL
AEHDISCHDGEIYLRRIIYAEGRSKSYINGQPFPLQKIKELSEKLVHIHGQHQHQTLMQHATHRQQLDRYANNHLLLNDV
NTLYKQHQQIVQEINALQSQEQQADRIKLLQFQIDELQALDIQDGELEALHQEHQILHHAREYLQLSQQINELLNSDDQP
NICSGLNQIFQLIQQLPQEQAQIKNTAELINSALIQCEEAITEMQQFADKIQLDPERLQEVEARISSIHQLARKYHLDSK
SLQEHEKTLQNELESLQNVESKLAHLHLQLAQINKVYESAALKLSESRKIHAKKLAQEITASIQQLGMPKGWIEIEITPL
EKMQAHGLDKVEYKVCTNPGMEPDSLNKIASGGELSRISLAIQMITAQKGSTPTLLFDEVDVGIGGSTAALVGKMLRKLG
ERLQVFCVTHQPQVAASAHHHFLVTKHSNNNQTFTHISLLKASDKIAEIARMMGGLTITEQTLSHAKELISLSNE
>Mature_555_residues
MLTTLRIEHFAIVKQLELDFTQGMTTFTGETGAGKSIMIDALLLALGEKADPSVVRPGEEKCDITAGFCFDESSELAQWL
AEHDISCHDGEIYLRRIIYAEGRSKSYINGQPFPLQKIKELSEKLVHIHGQHQHQTLMQHATHRQQLDRYANNHLLLNDV
NTLYKQHQQIVQEINALQSQEQQADRIKLLQFQIDELQALDIQDGELEALHQEHQILHHAREYLQLSQQINELLNSDDQP
NICSGLNQIFQLIQQLPQEQAQIKNTAELINSALIQCEEAITEMQQFADKIQLDPERLQEVEARISSIHQLARKYHLDSK
SLQEHEKTLQNELESLQNVESKLAHLHLQLAQINKVYESAALKLSESRKIHAKKLAQEITASIQQLGMPKGWIEIEITPL
EKMQAHGLDKVEYKVCTNPGMEPDSLNKIASGGELSRISLAIQMITAQKGSTPTLLFDEVDVGIGGSTAALVGKMLRKLG
ERLQVFCVTHQPQVAASAHHHFLVTKHSNNNQTFTHISLLKASDKIAEIARMMGGLTITEQTLSHAKELISLSNE

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=554, Percent_Identity=40.9747292418773, Blast_Score=400, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62582; Mature: 62582

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTTLRIEHFAIVKQLELDFTQGMTTFTGETGAGKSIMIDALLLALGEKADPSVVRPGEE
CCCEEEHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
KCDITAGFCFDESSELAQWLAEHDISCHDGEIYLRRIIYAEGRSKSYINGQPFPLQKIKE
CCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
LSEKLVHIHGQHQHQTLMQHATHRQQLDRYANNHLLLNDVNTLYKQHQQIVQEINALQSQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
EQQADRIKLLQFQIDELQALDIQDGELEALHQEHQILHHAREYLQLSQQINELLNSDDQP
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NICSGLNQIFQLIQQLPQEQAQIKNTAELINSALIQCEEAITEMQQFADKIQLDPERLQE
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VEARISSIHQLARKYHLDSKSLQEHEKTLQNELESLQNVESKLAHLHLQLAQINKVYESA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALKLSESRKIHAKKLAQEITASIQQLGMPKGWIEIEITPLEKMQAHGLDKVEYKVCTNPG
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCCCEEEEEECCCC
MEPDSLNKIASGGELSRISLAIQMITAQKGSTPTLLFDEVDVGIGGSTAALVGKMLRKLG
CCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ERLQVFCVTHQPQVAASAHHHFLVTKHSNNNQTFTHISLLKASDKIAEIARMMGGLTITE
HHHEEEEECCCCCHHHCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHH
QTLSHAKELISLSNE
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MLTTLRIEHFAIVKQLELDFTQGMTTFTGETGAGKSIMIDALLLALGEKADPSVVRPGEE
CCCEEEHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
KCDITAGFCFDESSELAQWLAEHDISCHDGEIYLRRIIYAEGRSKSYINGQPFPLQKIKE
CCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
LSEKLVHIHGQHQHQTLMQHATHRQQLDRYANNHLLLNDVNTLYKQHQQIVQEINALQSQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
EQQADRIKLLQFQIDELQALDIQDGELEALHQEHQILHHAREYLQLSQQINELLNSDDQP
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NICSGLNQIFQLIQQLPQEQAQIKNTAELINSALIQCEEAITEMQQFADKIQLDPERLQE
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VEARISSIHQLARKYHLDSKSLQEHEKTLQNELESLQNVESKLAHLHLQLAQINKVYESA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALKLSESRKIHAKKLAQEITASIQQLGMPKGWIEIEITPLEKMQAHGLDKVEYKVCTNPG
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCCCEEEEEECCCC
MEPDSLNKIASGGELSRISLAIQMITAQKGSTPTLLFDEVDVGIGGSTAALVGKMLRKLG
CCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ERLQVFCVTHQPQVAASAHHHFLVTKHSNNNQTFTHISLLKASDKIAEIARMMGGLTITE
HHHEEEEECCCCCHHHCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHH
QTLSHAKELISLSNE
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]