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The map label for this gene is 52842878

Identifier: 52842878

GI number: 52842878

Start: 3019399

End: 3020703

Strand: Direct

Name: 52842878

Synonym: lpg2672

Alternate gene names: NA

Gene position: 3019399-3020703 (Clockwise)

Preceding gene: 52842877

Following gene: 52842879

Centisome position: 88.86

GC content: 39.69

Gene sequence:

>1305_bases
ATGAGTGTTTTAAGAGCTTTTATCATTTCGTTTAGTGTAATTTTTTCTCACAATCTATTCGCCAATTCATTCAAAACTGA
AAAATGGCAGACTAAAAATGGGGTGCGAGTTGTATTTTATCAAGCAATGGAAGTACCTATGCTTGATATTAGTTTGGCAT
TTGCTGCCGGCTCTGCCTATGACGGTAAGTATTTTGGTTTAAGCGCATTAACAACCAATTTGATTAATCAAGGCAATTCC
GGTAAAGACGCAACGAATATTGCGGAAGCTTTAGCAGACACCGGAGCGCAATTTAATGCCGAAACGAGTAGGGATATGGT
TGTCCTTAGTCTAAGAACTCTTACCAGCAAAGAGGCTTTGCAGCAATCTACCAAAACCTTTAGCCAAATTATTAGTCATC
CTGATTTTCCTAAAGAAGCCTTCGCAAGAGAAAAAGATCAACTTCTCATGGCAGTTGAACAAACAGAAGAATCGCCAGAT
GATGTAGCCATCCAGAACTTTTTTAAAACCTTATATCAAGAGCATCCCTATGCCCATCCTGTGCATGGGACAGTTGAGTC
ACTAAATGCCATTAAAGAAAATCAAGTCATTGATTTTTATAAAAAATATTTTGTTGCTAAAAATGGTATATTAGTTATGG
TTGGTGCTATTGACAGTTCTCAAGCTCATCAATTGGCAGAACAATTGACCCAGGATCTACCCGCAGGAGAGCCAGCACCA
ACAATTCCCAAAGCCTCTCAGCTGGCCGATGCGGAAAAAATTAATGTACCGTTTCCTTCCTCGCAAACAGTAGTTCGCTT
GGGACAGATAGGAATAGATCATCATAATCAAAATTATTTCCCTTTAATGGTTGGGAATTATATTTTAGGTGGAGGAACAT
TAGTTTCCAGGCTGGGTACTGAGGTAAGAGAAAAAAGAGGCTTAACTTACGGAATCGATAGTCAGTTTGTCCCTATGCTA
GGTGAAGGACCTTTTATCATTAGTTTATCAACCAAAAACTCCGAGGCCAGAAACGCACTGCACATTACCCAGGATACCCT
GATAAAATTTATCAAAAATGGGCCGAATCAGGAGGAGCTGGCTTCAGCGAAACAATATCTGACAGGCAGTTTCCCTCTCT
CTCTGGGAAGCAATACCAACATTGCAAACCTGTTATTAAGAATGGCGTTCTACCATTTACCTGATAATTATCTGGATACC
TATGTTGCTAAAATCAATGCGGTAACCGATGCTGAAATCAAACAAGCATTCCAGCAACAGGTGAATCCTGAAAAATTACT
CTTGGTAACGGTTGGACAATCTTGA

Upstream 100 bases:

>100_bases
TAACCCCTGAGCAAATTCAGCAAGTTGCGCAACGATATTTTCAAGAAAATAACATGACTGTTGCAGAATTAAAGCCAATC
AGGCAAGAAGAGGTAAGACC

Downstream 100 bases:

>100_bases
AACAGGTAATAAGGATTATTGGAGGATTATATCGGGGGAAAAAAATACATTTCCCCGATGTAGATGGCCTGAGGCCAACA
CCAGACAGAGTTCGGGAGAC

Product: zinc protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MSVLRAFIISFSVIFSHNLFANSFKTEKWQTKNGVRVVFYQAMEVPMLDISLAFAAGSAYDGKYFGLSALTTNLINQGNS
GKDATNIAEALADTGAQFNAETSRDMVVLSLRTLTSKEALQQSTKTFSQIISHPDFPKEAFAREKDQLLMAVEQTEESPD
DVAIQNFFKTLYQEHPYAHPVHGTVESLNAIKENQVIDFYKKYFVAKNGILVMVGAIDSSQAHQLAEQLTQDLPAGEPAP
TIPKASQLADAEKINVPFPSSQTVVRLGQIGIDHHNQNYFPLMVGNYILGGGTLVSRLGTEVREKRGLTYGIDSQFVPML
GEGPFIISLSTKNSEARNALHITQDTLIKFIKNGPNQEELASAKQYLTGSFPLSLGSNTNIANLLLRMAFYHLPDNYLDT
YVAKINAVTDAEIKQAFQQQVNPEKLLLVTVGQS

Sequences:

>Translated_434_residues
MSVLRAFIISFSVIFSHNLFANSFKTEKWQTKNGVRVVFYQAMEVPMLDISLAFAAGSAYDGKYFGLSALTTNLINQGNS
GKDATNIAEALADTGAQFNAETSRDMVVLSLRTLTSKEALQQSTKTFSQIISHPDFPKEAFAREKDQLLMAVEQTEESPD
DVAIQNFFKTLYQEHPYAHPVHGTVESLNAIKENQVIDFYKKYFVAKNGILVMVGAIDSSQAHQLAEQLTQDLPAGEPAP
TIPKASQLADAEKINVPFPSSQTVVRLGQIGIDHHNQNYFPLMVGNYILGGGTLVSRLGTEVREKRGLTYGIDSQFVPML
GEGPFIISLSTKNSEARNALHITQDTLIKFIKNGPNQEELASAKQYLTGSFPLSLGSNTNIANLLLRMAFYHLPDNYLDT
YVAKINAVTDAEIKQAFQQQVNPEKLLLVTVGQS
>Mature_433_residues
SVLRAFIISFSVIFSHNLFANSFKTEKWQTKNGVRVVFYQAMEVPMLDISLAFAAGSAYDGKYFGLSALTTNLINQGNSG
KDATNIAEALADTGAQFNAETSRDMVVLSLRTLTSKEALQQSTKTFSQIISHPDFPKEAFAREKDQLLMAVEQTEESPDD
VAIQNFFKTLYQEHPYAHPVHGTVESLNAIKENQVIDFYKKYFVAKNGILVMVGAIDSSQAHQLAEQLTQDLPAGEPAPT
IPKASQLADAEKINVPFPSSQTVVRLGQIGIDHHNQNYFPLMVGNYILGGGTLVSRLGTEVREKRGLTYGIDSQFVPMLG
EGPFIISLSTKNSEARNALHITQDTLIKFIKNGPNQEELASAKQYLTGSFPLSLGSNTNIANLLLRMAFYHLPDNYLDTY
VAKINAVTDAEIKQAFQQQVNPEKLLLVTVGQS

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 47822; Mature: 47691

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLRAFIISFSVIFSHNLFANSFKTEKWQTKNGVRVVFYQAMEVPMLDISLAFAAGSAY
CHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCEEEEEEHHCCCEEEEEEEEECCCCC
DGKYFGLSALTTNLINQGNSGKDATNIAEALADTGAQFNAETSRDMVVLSLRTLTSKEAL
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHH
QQSTKTFSQIISHPDFPKEAFAREKDQLLMAVEQTEESPDDVAIQNFFKTLYQEHPYAHP
HHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
VHGTVESLNAIKENQVIDFYKKYFVAKNGILVMVGAIDSSQAHQLAEQLTQDLPAGEPAP
CCCHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCC
TIPKASQLADAEKINVPFPSSQTVVRLGQIGIDHHNQNYFPLMVGNYILGGGTLVSRLGT
CCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCEEECCHHHHHHHHH
EVREKRGLTYGIDSQFVPMLGEGPFIISLSTKNSEARNALHITQDTLIKFIKNGPNQEEL
HHHHHCCCEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHHHHCCCCHHHH
ASAKQYLTGSFPLSLGSNTNIANLLLRMAFYHLPDNYLDTYVAKINAVTDAEIKQAFQQQ
HHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHC
VNPEKLLLVTVGQS
CCCCEEEEEEECCC
>Mature Secondary Structure 
SVLRAFIISFSVIFSHNLFANSFKTEKWQTKNGVRVVFYQAMEVPMLDISLAFAAGSAY
HHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCEEEEEEHHCCCEEEEEEEEECCCCC
DGKYFGLSALTTNLINQGNSGKDATNIAEALADTGAQFNAETSRDMVVLSLRTLTSKEAL
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHH
QQSTKTFSQIISHPDFPKEAFAREKDQLLMAVEQTEESPDDVAIQNFFKTLYQEHPYAHP
HHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
VHGTVESLNAIKENQVIDFYKKYFVAKNGILVMVGAIDSSQAHQLAEQLTQDLPAGEPAP
CCCHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCC
TIPKASQLADAEKINVPFPSSQTVVRLGQIGIDHHNQNYFPLMVGNYILGGGTLVSRLGT
CCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCEEECCHHHHHHHHH
EVREKRGLTYGIDSQFVPMLGEGPFIISLSTKNSEARNALHITQDTLIKFIKNGPNQEEL
HHHHHCCCEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHHHHCCCCHHHH
ASAKQYLTGSFPLSLGSNTNIANLLLRMAFYHLPDNYLDTYVAKINAVTDAEIKQAFQQQ
HHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHC
VNPEKLLLVTVGQS
CCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]