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The map label for this gene is 52842707

Identifier: 52842707

GI number: 52842707

Start: 2816981

End: 2817553

Strand: Direct

Name: 52842707

Synonym: lpg2499

Alternate gene names: NA

Gene position: 2816981-2817553 (Clockwise)

Preceding gene: 52842706

Following gene: 52842708

Centisome position: 82.91

GC content: 36.65

Gene sequence:

>573_bases
ATGCTCCATAATACTAAAATAAACAAACTCGCTGTCTTTTGTGGATCTAACACTGGTTATTCTGAAGTCTATAAACAATC
AGCTGAAAACATGGCCGATGTCCTAAGCAGTAATGGTATTACCCTGGTTTATGGTGGCTCAAAAAGCGGTTTGATGGGAA
TAATAGCCAATCGCATGTTAAAAAATGGCTCTAATGTCATTGGTGTTATACCAAAATCTCTGGTTGACACAGAAAAAGCA
CATGATGGGTTGACGGAATTACATGTTGTTAATTCTATGTATGAAAGAAAAATATTGATGTGTAAATTGTCGGACGGGTT
CATTCTGCTGCCAGGTGGGTCAGGTTCTCTGGATGAGTTTTTTGAAATGTTTACCCTGGTACAATTAGGATACCATAAAA
AACCTTGCTGTGTACTCAATGCCTCTGGTTACTATGATTACCTTTTGCAATTTTTAGACTATGCTGTTAATCAAGGTTTT
TTACGCTCAAAGGATCGAAACGCGCTCATTGTCAATCAATATCCAGATACGCTCATTGAGAATTTATTTGAAGTAATCAA
TAATCGCAAATAA

Upstream 100 bases:

>100_bases
AATCCTATAAATTTTAATAATGAAAATATTAACTCATTAAAAATAAACTGTATTTCCTCATTTCATGTTATAAATAAAAC
ATTGCATCTGGAATTTTAAA

Downstream 100 bases:

>100_bases
CAATTTAGGAAAATTAATAACATAACAAGGAGTTAACCAATGCCAAAAAAACTGCTCATCGCTGCTTTATTATGCAATAT
TTTTTGTAACCCCAGCCATC

Product: lysine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MLHNTKINKLAVFCGSNTGYSEVYKQSAENMADVLSSNGITLVYGGSKSGLMGIIANRMLKNGSNVIGVIPKSLVDTEKA
HDGLTELHVVNSMYERKILMCKLSDGFILLPGGSGSLDEFFEMFTLVQLGYHKKPCCVLNASGYYDYLLQFLDYAVNQGF
LRSKDRNALIVNQYPDTLIENLFEVINNRK

Sequences:

>Translated_190_residues
MLHNTKINKLAVFCGSNTGYSEVYKQSAENMADVLSSNGITLVYGGSKSGLMGIIANRMLKNGSNVIGVIPKSLVDTEKA
HDGLTELHVVNSMYERKILMCKLSDGFILLPGGSGSLDEFFEMFTLVQLGYHKKPCCVLNASGYYDYLLQFLDYAVNQGF
LRSKDRNALIVNQYPDTLIENLFEVINNRK
>Mature_190_residues
MLHNTKINKLAVFCGSNTGYSEVYKQSAENMADVLSSNGITLVYGGSKSGLMGIIANRMLKNGSNVIGVIPKSLVDTEKA
HDGLTELHVVNSMYERKILMCKLSDGFILLPGGSGSLDEFFEMFTLVQLGYHKKPCCVLNASGYYDYLLQFLDYAVNQGF
LRSKDRNALIVNQYPDTLIENLFEVINNRK

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=199, Percent_Identity=33.1658291457286, Blast_Score=118, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 21108; Mature: 21108

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHNTKINKLAVFCGSNTGYSEVYKQSAENMADVLSSNGITLVYGGSKSGLMGIIANRML
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH
KNGSNVIGVIPKSLVDTEKAHDGLTELHVVNSMYERKILMCKLSDGFILLPGGSGSLDEF
HCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHCEEEEEEECCCEEEEECCCCCHHHH
FEMFTLVQLGYHKKPCCVLNASGYYDYLLQFLDYAVNQGFLRSKDRNALIVNQYPDTLIE
HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCHHCCCCCCEEEEECCCHHHHH
NLFEVINNRK
HHHHHHCCCC
>Mature Secondary Structure
MLHNTKINKLAVFCGSNTGYSEVYKQSAENMADVLSSNGITLVYGGSKSGLMGIIANRML
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH
KNGSNVIGVIPKSLVDTEKAHDGLTELHVVNSMYERKILMCKLSDGFILLPGGSGSLDEF
HCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHCEEEEEEECCCEEEEECCCCCHHHH
FEMFTLVQLGYHKKPCCVLNASGYYDYLLQFLDYAVNQGFLRSKDRNALIVNQYPDTLIE
HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCHHCCCCCCEEEEECCCHHHHH
NLFEVINNRK
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]