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The map label for this gene is cynT [H]

Identifier: 52842708

GI number: 52842708

Start: 2817593

End: 2818330

Strand: Direct

Name: cynT [H]

Synonym: lpg2500

Alternate gene names: 52842708

Gene position: 2817593-2818330 (Clockwise)

Preceding gene: 52842707

Following gene: 52842709

Centisome position: 82.93

GC content: 40.51

Gene sequence:

>738_bases
ATGCCAAAAAAACTGCTCATCGCTGCTTTATTATGCAATATTTTTTGTAACCCCAGCCATCTCTATGCCTCATCAACAGA
AATACCCATACTTGGGAAAACCATGACCCAGGCTAAACAACAACAAATGACTCCCAAGCAGGCATTGCAACGTTTAAAAG
ACGGTAATCAACGCTTCCTCAGTAATCAACCTTTAGCACGAGATTATCTAAAACAAGCCAAACAATCAGCTTATGGCCAA
TATCCTTTTGCGGTCATCTTGAATTGTATGGACTCGCGCAGTGTTCCTGAATTCTTTTTTGATCAAGGATTGGCAGACCT
GTTTACCTTACGTGTTGCTGGCAATGTTCTCAACGATGACATTTTAGGAAGTATGGAATTTGCAACAAAAGTAGTGGGAG
CACGTTTGGTAGTTGTCCTGGCTCACACCTCCTGTGGGGCTGTTGCAGGAGCATGCAAAGATGTTAAATTAGGGCATTTG
ACTGATGTTATAAATAAAATCCAGCCTGTTGTAAAACCCAGCATGGAAAGCACGGGCATTGATAATTGCTCTGACCCCAA
ACTGATTGATGACATGGCTAAAGCCAATGCTCTGCATGTTGTAAAAAATATACTAGAGCAAAGCCCCATTTTAAATGAAC
TAGTTAAGAATAAACAAATTGGGATTGTAGCGGGTCTTCATGATATTAAAACAGGTAAGGTGACTTTTTTTGAAGAAAAG
CGATCTGTCCCAGAGTAA

Upstream 100 bases:

>100_bases
CAATCAATATCCAGATACGCTCATTGAGAATTTATTTGAAGTAATCAATAATCGCAAATAACAATTTAGGAAAATTAATA
ACATAACAAGGAGTTAACCA

Downstream 100 bases:

>100_bases
AGCATGTTGGCAGTTGCCAACTTGCTTTAATATTTCCTTTCAAATGCAAGCTGAATTTGGTTACAATCGCATAATTTTTG
GTGAATGACTTTTTATATGC

Product: carbonic anhydrase Mig5

Products: NA

Alternate protein names: Carbonate dehydratase [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MPKKLLIAALLCNIFCNPSHLYASSTEIPILGKTMTQAKQQQMTPKQALQRLKDGNQRFLSNQPLARDYLKQAKQSAYGQ
YPFAVILNCMDSRSVPEFFFDQGLADLFTLRVAGNVLNDDILGSMEFATKVVGARLVVVLAHTSCGAVAGACKDVKLGHL
TDVINKIQPVVKPSMESTGIDNCSDPKLIDDMAKANALHVVKNILEQSPILNELVKNKQIGIVAGLHDIKTGKVTFFEEK
RSVPE

Sequences:

>Translated_245_residues
MPKKLLIAALLCNIFCNPSHLYASSTEIPILGKTMTQAKQQQMTPKQALQRLKDGNQRFLSNQPLARDYLKQAKQSAYGQ
YPFAVILNCMDSRSVPEFFFDQGLADLFTLRVAGNVLNDDILGSMEFATKVVGARLVVVLAHTSCGAVAGACKDVKLGHL
TDVINKIQPVVKPSMESTGIDNCSDPKLIDDMAKANALHVVKNILEQSPILNELVKNKQIGIVAGLHDIKTGKVTFFEEK
RSVPE
>Mature_244_residues
PKKLLIAALLCNIFCNPSHLYASSTEIPILGKTMTQAKQQQMTPKQALQRLKDGNQRFLSNQPLARDYLKQAKQSAYGQY
PFAVILNCMDSRSVPEFFFDQGLADLFTLRVAGNVLNDDILGSMEFATKVVGARLVVVLAHTSCGAVAGACKDVKLGHLT
DVINKIQPVVKPSMESTGIDNCSDPKLIDDMAKANALHVVKNILEQSPILNELVKNKQIGIVAGLHDIKTGKVTFFEEKR
SVPE

Specific function: Catalyzes the reversible hydration of carbon dioxide to form bicarbonate [H]

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI1786534, Length=171, Percent_Identity=23.3918128654971, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765
- InterPro:   IPR015892 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 26853; Mature: 26721

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKLLIAALLCNIFCNPSHLYASSTEIPILGKTMTQAKQQQMTPKQALQRLKDGNQRFL
CCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHH
SNQPLARDYLKQAKQSAYGQYPFAVILNCMDSRSVPEFFFDQGLADLFTLRVAGNVLNDD
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCHHHHH
ILGSMEFATKVVGARLVVVLAHTSCGAVAGACKDVKLGHLTDVINKIQPVVKPSMESTGI
HHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHCCC
DNCSDPKLIDDMAKANALHVVKNILEQSPILNELVKNKQIGIVAGLHDIKTGKVTFFEEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEECHHHCCCCCEEEEHHH
RSVPE
CCCCC
>Mature Secondary Structure 
PKKLLIAALLCNIFCNPSHLYASSTEIPILGKTMTQAKQQQMTPKQALQRLKDGNQRFL
CHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHH
SNQPLARDYLKQAKQSAYGQYPFAVILNCMDSRSVPEFFFDQGLADLFTLRVAGNVLNDD
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCHHHHH
ILGSMEFATKVVGARLVVVLAHTSCGAVAGACKDVKLGHLTDVINKIQPVVKPSMESTGI
HHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHCCC
DNCSDPKLIDDMAKANALHVVKNILEQSPILNELVKNKQIGIVAGLHDIKTGKVTFFEEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEECHHHCCCCCEEEEHHH
RSVPE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]