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The map label for this gene is yfdH [C]

Identifier: 52842686

GI number: 52842686

Start: 2791964

End: 2792995

Strand: Direct

Name: yfdH [C]

Synonym: lpg2478

Alternate gene names: 52842686

Gene position: 2791964-2792995 (Clockwise)

Preceding gene: 52842673

Following gene: 52842687

Centisome position: 82.17

GC content: 39.92

Gene sequence:

>1032_bases
ATGGACTCAACTTCCAAGAGTAGGTTAACATATGAAGCTATCTATCTTTTGTATGGTACATTAATACTCATTATGTCTAA
AACTGCAAAACATAAAAAACTCATCTCTTGCGTTGTTCCTGTTTTTAATGAGGAAGTACTTATTGCTGAATTCATCGCCG
CATTGGATAAAACTCTTAAGAGCATCACTTATCCTTATGAAATTCTACTGATAGATGATGGAAGCCAGGATAATACTTTC
GCAATCATTCAAACATTAAGAAAAGAGTATTCTCTTCGTTGCATTCGTTTCAGTAGAAATTTCGGCAAGGAAAAAGCGCT
CAGTGCAGGATTGGATCATGCGCGCGGAGATGCTGTGATCTTATTGGATAGTGATTTCCAACACCCGCTTGAATTATTAA
GCGAATTTATCGCCAAATGGGAAGACGGTTATGACATGGTTTATGCCGTGAGGCAAAATCGTTCTGACGAATCATGGCTA
AAACGAGTTTGCGCTAAAATTTTTTATCATCTCACTTCCAAAATAAACCGTATTAATATCCCGGCAAATGCAGGTGACTT
TAGATTGCTCGATAGAAAAATTGTTAATGCACTACAAACCCTTCCCGAACGTAATCGCTTTATGAAGGGTTTATACAGCT
GGGTCGGTTTTAAACAAATAGCCGTGCCATTTAATGTACACCCCCGTAAATCGGGTAGTTCACAATGGAGTTTTTATTCT
TTACTGGATTTGGCAATTACTGGCATAACATCGTTTACTGCTTTTCCTCTAAGAATGATTTCCCTGGGAGGAATGGTGGT
GGCAGCCCTGGCGCTTATTTATGCCGCCTGGATTGTATTAAGCACGCTAATCTTTGGCATTGAAACCCCTGGCTGGGCAA
CCATAGTCACTGCAATCAGTTTTTTTGGCGGATTGCAATTATTTGCTATCGGTGTAGTTGGCGAATACATAGGCCGTGTT
TTTGATGAAGTGAAACACAGACCCCACTACATTATCGATGAGGAGTCCAGTTTTGATGACCACTGCTCTTAA

Upstream 100 bases:

>100_bases
AATCAAAAACCAACCTGAATCGTTCATTAGTATGGGGCCATTATTAATGTTAAAGACTATGGACAATATACCAATACTTT
CACTGTTTTTATAACCCTCA

Downstream 100 bases:

>100_bases
ATTATCCCATCGATTAATTTATTTTACTGGAGTAGGGATCTGCGCTGCTATCGTACATCTTTTGATCGTGTTCAATTTAG
TCAATTTTCTAAATCTTCAA

Product: glycosyltransferase, group 2 family protein (glycan biosynthesis)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MDSTSKSRLTYEAIYLLYGTLILIMSKTAKHKKLISCVVPVFNEEVLIAEFIAALDKTLKSITYPYEILLIDDGSQDNTF
AIIQTLRKEYSLRCIRFSRNFGKEKALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQNRSDESWL
KRVCAKIFYHLTSKINRINIPANAGDFRLLDRKIVNALQTLPERNRFMKGLYSWVGFKQIAVPFNVHPRKSGSSQWSFYS
LLDLAITGITSFTAFPLRMISLGGMVVAALALIYAAWIVLSTLIFGIETPGWATIVTAISFFGGLQLFAIGVVGEYIGRV
FDEVKHRPHYIIDEESSFDDHCS

Sequences:

>Translated_343_residues
MDSTSKSRLTYEAIYLLYGTLILIMSKTAKHKKLISCVVPVFNEEVLIAEFIAALDKTLKSITYPYEILLIDDGSQDNTF
AIIQTLRKEYSLRCIRFSRNFGKEKALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQNRSDESWL
KRVCAKIFYHLTSKINRINIPANAGDFRLLDRKIVNALQTLPERNRFMKGLYSWVGFKQIAVPFNVHPRKSGSSQWSFYS
LLDLAITGITSFTAFPLRMISLGGMVVAALALIYAAWIVLSTLIFGIETPGWATIVTAISFFGGLQLFAIGVVGEYIGRV
FDEVKHRPHYIIDEESSFDDHCS
>Mature_343_residues
MDSTSKSRLTYEAIYLLYGTLILIMSKTAKHKKLISCVVPVFNEEVLIAEFIAALDKTLKSITYPYEILLIDDGSQDNTF
AIIQTLRKEYSLRCIRFSRNFGKEKALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQNRSDESWL
KRVCAKIFYHLTSKINRINIPANAGDFRLLDRKIVNALQTLPERNRFMKGLYSWVGFKQIAVPFNVHPRKSGSSQWSFYS
LLDLAITGITSFTAFPLRMISLGGMVVAALALIYAAWIVLSTLIFGIETPGWATIVTAISFFGGLQLFAIGVVGEYIGRV
FDEVKHRPHYIIDEESSFDDHCS

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=171, Percent_Identity=29.8245614035088, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1788692, Length=299, Percent_Identity=47.4916387959866, Blast_Score=273, Evalue=8e-75,
Organism=Escherichia coli, GI1788588, Length=309, Percent_Identity=35.2750809061489, Blast_Score=186, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24585265, Length=176, Percent_Identity=28.4090909090909, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 38807; Mature: 38807

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSTSKSRLTYEAIYLLYGTLILIMSKTAKHKKLISCVVPVFNEEVLIAEFIAALDKTLK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
SITYPYEILLIDDGSQDNTFAIIQTLRKEYSLRCIRFSRNFGKEKALSAGLDHARGDAVI
HHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEE
LLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQNRSDESWLKRVCAKIFYHLTSKINRINI
EECCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEC
PANAGDFRLLDRKIVNALQTLPERNRFMKGLYSWVGFKQIAVPFNVHPRKSGSSQWSFYS
CCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCCCHHHHH
LLDLAITGITSFTAFPLRMISLGGMVVAALALIYAAWIVLSTLIFGIETPGWATIVTAIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIIDEESSFDDHCS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MDSTSKSRLTYEAIYLLYGTLILIMSKTAKHKKLISCVVPVFNEEVLIAEFIAALDKTLK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
SITYPYEILLIDDGSQDNTFAIIQTLRKEYSLRCIRFSRNFGKEKALSAGLDHARGDAVI
HHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEE
LLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQNRSDESWLKRVCAKIFYHLTSKINRINI
EECCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEC
PANAGDFRLLDRKIVNALQTLPERNRFMKGLYSWVGFKQIAVPFNVHPRKSGSSQWSFYS
CCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCCCHHHHH
LLDLAITGITSFTAFPLRMISLGGMVVAALALIYAAWIVLSTLIFGIETPGWATIVTAIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIIDEESSFDDHCS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]