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The map label for this gene is sidD

Identifier: 52842673

GI number: 52842673

Start: 2779337

End: 2780860

Strand: Direct

Name: sidD

Synonym: lpg2465

Alternate gene names: NA

Gene position: 2779337-2780860 (Clockwise)

Preceding gene: 52842671

Following gene: 52842686

Centisome position: 81.8

GC content: 34.19

Gene sequence:

>1524_bases
TTGGTATATTATGAGATCATTAAGGATATTGTCTTTACATATAATTTACAATTTACACATCTAATACACAATGACAGGAT
ATCTGAAGTAAATTTAGGAGGAGTAACGATGCGTTCGATTATTACACAAATCTGTAATGGTGTTCTTCATGGACAAAGCT
ATCAATCTGGTTCCAATGATTTAGATAAGGGTAATAGTGAAATCTTTGCATCCAGCCTCTTTGTACATTTGAATGAACAG
GGCAAAGAAATTATAAAGCACAAGGATTCTGACGATAAAATAGTCATTGGATATACCAAAGATGGAATGGCTTTTCAAAT
AGTGGTGGATGGCTTTTATGGATGCGAACGTCAGGCTGTTTTTTCATTTATTGATAACTATGTACTCCCTTTAATTGATA
ACTTCTCCTTAGATCTCACCAGATACCCGGATTCAAAAAAAGTTACCGAATCACTCATTCATACTATTTACTCTTTGCGC
AGCAAACATGCTCCATTGGCAGAGTTCACTATGTCTTTATGCGTAACTTATCAAAAGGATGAACAACTGTTTTGTGCTGG
ATTCGGCATTGGTGACACCGGAATAGCTATCAAACGAAACGAAGGAACAATTGAACAATTAGTTTGTCATACGGAAGTTG
ATGGATTCAAAGACGCATTTGACAACTATTCATCCGCCAATATCGACTTGGTCATTGAAAGAAATTCTGTCTTTAATACT
AAAGTCATGCCCGGTGATGAACTAGTAGGATACACTTATGTTCCACCGATGTTAGAAATGACTGAAAAAGAGTTTGAAGT
AGAAACTGTTGATGGCAAGAAAATAAATAAAAGAATTGTAAGACATCTAAATCTCGATCCTGGAAATTTTGATGACAAAG
ACCCCTTATTTTCTCAATTGCTACAAGTTGTAAAATCCAAACAAAAACAGCTGGTTGAACAAGCAAAAGAAACAGGACAA
ATCCAACGTTTTGGTGATGATTTTACAGTAGGAAGATTAGTCATTCCTGATCAGTTACTAATAAATCAATTAAGAATTCA
TGCTTTATCAATCGGAGTAAGTGATGGATTACTTTCATACATCAAGAATGAAAATGAAAACAAAGGTTTTCTTGGTATAT
ATGGTTTCTTCACAGGAGCTGATAAAAATATAGAAAAAGCGACTCTTTATAAAAATCTCATCGCAAAATACCAAAATAAT
CATTTTATCTCTCTAATTATTCTTTCTGCTCTAGTCTCTGATAGTAAAACACCCCTAATGACTCAGTACTTAGTTGGCTA
TCTGGATTTCCCGTCGAAAGCATTACTTGCTAATAAAATTACAGAATTGCTTTTAAAAGAATTAGAAAATCCGGATATGA
GAGAAATACTGGGTTCCAGATTAGCAACTGATGTTATAGAGGAATTAGAAACTAAAATTATTCGTTATATTCACAACCCA
GCAGGCTCGGATATTCATTCAACGCTAAACCTTTGGACTGCAGATAAAATTAAGGCTGCAACTAACTCGAGTCTTACTAT
TTAA

Upstream 100 bases:

>100_bases
CACTCATTTTAATTCTCCCCATTATGCTCATGTACTCGAGGATTCATAAGTCTTCAGATAAGATAGATAATACCTCTCTA
CTTGTAATTAAGTATATCAT

Downstream 100 bases:

>100_bases
GTATTATAAGTTCATTATGAAAAGAAACTCATACGATATGATTTAACATATCCTTGAGTTCCTTTTTTATTTGGATAACA
ACGACCTTCATTGCTTTTTC

Product: SidD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MVYYEIIKDIVFTYNLQFTHLIHNDRISEVNLGGVTMRSIITQICNGVLHGQSYQSGSNDLDKGNSEIFASSLFVHLNEQ
GKEIIKHKDSDDKIVIGYTKDGMAFQIVVDGFYGCERQAVFSFIDNYVLPLIDNFSLDLTRYPDSKKVTESLIHTIYSLR
SKHAPLAEFTMSLCVTYQKDEQLFCAGFGIGDTGIAIKRNEGTIEQLVCHTEVDGFKDAFDNYSSANIDLVIERNSVFNT
KVMPGDELVGYTYVPPMLEMTEKEFEVETVDGKKINKRIVRHLNLDPGNFDDKDPLFSQLLQVVKSKQKQLVEQAKETGQ
IQRFGDDFTVGRLVIPDQLLINQLRIHALSIGVSDGLLSYIKNENENKGFLGIYGFFTGADKNIEKATLYKNLIAKYQNN
HFISLIILSALVSDSKTPLMTQYLVGYLDFPSKALLANKITELLLKELENPDMREILGSRLATDVIEELETKIIRYIHNP
AGSDIHSTLNLWTADKIKAATNSSLTI

Sequences:

>Translated_507_residues
MVYYEIIKDIVFTYNLQFTHLIHNDRISEVNLGGVTMRSIITQICNGVLHGQSYQSGSNDLDKGNSEIFASSLFVHLNEQ
GKEIIKHKDSDDKIVIGYTKDGMAFQIVVDGFYGCERQAVFSFIDNYVLPLIDNFSLDLTRYPDSKKVTESLIHTIYSLR
SKHAPLAEFTMSLCVTYQKDEQLFCAGFGIGDTGIAIKRNEGTIEQLVCHTEVDGFKDAFDNYSSANIDLVIERNSVFNT
KVMPGDELVGYTYVPPMLEMTEKEFEVETVDGKKINKRIVRHLNLDPGNFDDKDPLFSQLLQVVKSKQKQLVEQAKETGQ
IQRFGDDFTVGRLVIPDQLLINQLRIHALSIGVSDGLLSYIKNENENKGFLGIYGFFTGADKNIEKATLYKNLIAKYQNN
HFISLIILSALVSDSKTPLMTQYLVGYLDFPSKALLANKITELLLKELENPDMREILGSRLATDVIEELETKIIRYIHNP
AGSDIHSTLNLWTADKIKAATNSSLTI
>Mature_507_residues
MVYYEIIKDIVFTYNLQFTHLIHNDRISEVNLGGVTMRSIITQICNGVLHGQSYQSGSNDLDKGNSEIFASSLFVHLNEQ
GKEIIKHKDSDDKIVIGYTKDGMAFQIVVDGFYGCERQAVFSFIDNYVLPLIDNFSLDLTRYPDSKKVTESLIHTIYSLR
SKHAPLAEFTMSLCVTYQKDEQLFCAGFGIGDTGIAIKRNEGTIEQLVCHTEVDGFKDAFDNYSSANIDLVIERNSVFNT
KVMPGDELVGYTYVPPMLEMTEKEFEVETVDGKKINKRIVRHLNLDPGNFDDKDPLFSQLLQVVKSKQKQLVEQAKETGQ
IQRFGDDFTVGRLVIPDQLLINQLRIHALSIGVSDGLLSYIKNENENKGFLGIYGFFTGADKNIEKATLYKNLIAKYQNN
HFISLIILSALVSDSKTPLMTQYLVGYLDFPSKALLANKITELLLKELENPDMREILGSRLATDVIEELETKIIRYIHNP
AGSDIHSTLNLWTADKIKAATNSSLTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57148; Mature: 57148

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYYEIIKDIVFTYNLQFTHLIHNDRISEVNLGGVTMRSIITQICNGVLHGQSYQSGSND
CCHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
LDKGNSEIFASSLFVHLNEQGKEIIKHKDSDDKIVIGYTKDGMAFQIVVDGFYGCERQAV
CCCCCHHHEEEHHEEEECHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHH
FSFIDNYVLPLIDNFSLDLTRYPDSKKVTESLIHTIYSLRSKHAPLAEFTMSLCVTYQKD
HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCC
EQLFCAGFGIGDTGIAIKRNEGTIEQLVCHTEVDGFKDAFDNYSSANIDLVIERNSVFNT
CEEEEEECCCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEECCCCEEC
KVMPGDELVGYTYVPPMLEMTEKEFEVETVDGKKINKRIVRHLNLDPGNFDDKDPLFSQL
CCCCCCCCCCEECCCCHHHHHHHHCEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHH
LQVVKSKQKQLVEQAKETGQIQRFGDDFTVGRLVIPDQLLINQLRIHALSIGVSDGLLSY
HHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCEEECCHHHHHHHHHHHHEEECCHHHHHHH
IKNENENKGFLGIYGFFTGADKNIEKATLYKNLIAKYQNNHFISLIILSALVSDSKTPLM
HCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHH
TQYLVGYLDFPSKALLANKITELLLKELENPDMREILGSRLATDVIEELETKIIRYIHNP
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGSDIHSTLNLWTADKIKAATNSSLTI
CCCCHHHHHHHCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MVYYEIIKDIVFTYNLQFTHLIHNDRISEVNLGGVTMRSIITQICNGVLHGQSYQSGSND
CCHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
LDKGNSEIFASSLFVHLNEQGKEIIKHKDSDDKIVIGYTKDGMAFQIVVDGFYGCERQAV
CCCCCHHHEEEHHEEEECHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHH
FSFIDNYVLPLIDNFSLDLTRYPDSKKVTESLIHTIYSLRSKHAPLAEFTMSLCVTYQKD
HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCC
EQLFCAGFGIGDTGIAIKRNEGTIEQLVCHTEVDGFKDAFDNYSSANIDLVIERNSVFNT
CEEEEEECCCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEECCCCEEC
KVMPGDELVGYTYVPPMLEMTEKEFEVETVDGKKINKRIVRHLNLDPGNFDDKDPLFSQL
CCCCCCCCCCEECCCCHHHHHHHHCEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHH
LQVVKSKQKQLVEQAKETGQIQRFGDDFTVGRLVIPDQLLINQLRIHALSIGVSDGLLSY
HHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCEEECCHHHHHHHHHHHHEEECCHHHHHHH
IKNENENKGFLGIYGFFTGADKNIEKATLYKNLIAKYQNNHFISLIILSALVSDSKTPLM
HCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHH
TQYLVGYLDFPSKALLANKITELLLKELENPDMREILGSRLATDVIEELETKIIRYIHNP
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGSDIHSTLNLWTADKIKAATNSSLTI
CCCCHHHHHHHCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA