Click here to switch to the map view.

The map label for this gene is 52842604

Identifier: 52842604

GI number: 52842604

Start: 2705662

End: 2706054

Strand: Direct

Name: 52842604

Synonym: lpg2395

Alternate gene names: NA

Gene position: 2705662-2706054 (Clockwise)

Preceding gene: 52842603

Following gene: 52842609

Centisome position: 79.63

GC content: 39.19

Gene sequence:

>393_bases
CTGAATGGGACTCACAAGGAAAAGGAGATCACCATGAGTAACAAAGCGAAAAACACTCACCTCAAAAATGGAGATAGTCA
AACCAAACAAGCTTATACCAATCAGGCTTCACCACTTTTTTTTAGTCAAAAGCAAATAACCCCCTCATCGGGAACACTGG
AAACAAAAAAACCACAGGAAGGAAAACAACCCACTCAAGAAATCAGCCTTGAGACAACCACAGACATTTTATTAGCTGCT
ATTTTGCAAGAATTGAAAACGCAAAATATGATTGAACTCATGAAGCTCAAAGCTCAACAGGAACATGAGCAAGAGGAATT
AGAAACCATTGAAGCAATGAAAGAGAAAGATGATGCCCGGTTTAATGAAATCCGTCAAACGATGTATGCCTGA

Upstream 100 bases:

>100_bases
TGGGCATAACCTGATCTTAATGATCTATATTAGCGATAAAAACATAAAATTTATAAATATTGAAAAAAACATTTGCATTT
AACTCAAGATTTGCATTAAT

Downstream 100 bases:

>100_bases
TTAACAGGACATCCTTACTTAACCAATTAACGGATAACCGTTAATTGGTTTATCCTCTGACAAGAGTAAATGTTACCTAA
AAGAAAAGCCCCTAACCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MNGTHKEKEITMSNKAKNTHLKNGDSQTKQAYTNQASPLFFSQKQITPSSGTLETKKPQEGKQPTQEISLETTTDILLAA
ILQELKTQNMIELMKLKAQQEHEQEELETIEAMKEKDDARFNEIRQTMYA

Sequences:

>Translated_130_residues
MNGTHKEKEITMSNKAKNTHLKNGDSQTKQAYTNQASPLFFSQKQITPSSGTLETKKPQEGKQPTQEISLETTTDILLAA
ILQELKTQNMIELMKLKAQQEHEQEELETIEAMKEKDDARFNEIRQTMYA
>Mature_130_residues
MNGTHKEKEITMSNKAKNTHLKNGDSQTKQAYTNQASPLFFSQKQITPSSGTLETKKPQEGKQPTQEISLETTTDILLAA
ILQELKTQNMIELMKLKAQQEHEQEELETIEAMKEKDDARFNEIRQTMYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14871; Mature: 14871

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGTHKEKEITMSNKAKNTHLKNGDSQTKQAYTNQASPLFFSQKQITPSSGTLETKKPQE
CCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCC
GKQPTQEISLETTTDILLAAILQELKTQNMIELMKLKAQQEHEQEELETIEAMKEKDDAR
CCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FNEIRQTMYA
HHHHHHHHCC
>Mature Secondary Structure
MNGTHKEKEITMSNKAKNTHLKNGDSQTKQAYTNQASPLFFSQKQITPSSGTLETKKPQE
CCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCC
GKQPTQEISLETTTDILLAAILQELKTQNMIELMKLKAQQEHEQEELETIEAMKEKDDAR
CCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FNEIRQTMYA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA