Click here to switch to the map view.

The map label for this gene is 52842603

Identifier: 52842603

GI number: 52842603

Start: 2705410

End: 2705643

Strand: Direct

Name: 52842603

Synonym: lpg2394

Alternate gene names: NA

Gene position: 2705410-2705643 (Clockwise)

Preceding gene: 52842601

Following gene: 52842604

Centisome position: 79.62

GC content: 27.35

Gene sequence:

>234_bases
ATGACATCTGGCAGGCTTGGATACATAAAAAACTGGCTACACAAAATAATTATTCAATTTTACCAATATATTGCCACTTC
TATCATTCAAGGCGGCTTGATGGAAGAAAATTATGTTCTTTTTATTTACTACTTAAGGATTAATAGAAAACATGGGCATA
ACCTGATCTTAATGATCTATATTAGCGATAAAAACATAAAATTTATAAATATTGAAAAAAACATTTGCATTTAA

Upstream 100 bases:

>100_bases
ATTTTACTTATCTAAGTATAGAATAATTTCAAGAAAATCTCGAAGCGTTATCAGTTATTGAGAATTGCCTCTCATATCTA
ACATAAGCCCTGATACAAAG

Downstream 100 bases:

>100_bases
CTCAAGATTTGCATTAATCTGAATGGGACTCACAAGGAAAAGGAGATCACCATGAGTAACAAAGCGAAAAACACTCACCT
CAAAAATGGAGATAGTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MTSGRLGYIKNWLHKIIIQFYQYIATSIIQGGLMEENYVLFIYYLRINRKHGHNLILMIYISDKNIKFINIEKNICI

Sequences:

>Translated_77_residues
MTSGRLGYIKNWLHKIIIQFYQYIATSIIQGGLMEENYVLFIYYLRINRKHGHNLILMIYISDKNIKFINIEKNICI
>Mature_76_residues
TSGRLGYIKNWLHKIIIQFYQYIATSIIQGGLMEENYVLFIYYLRINRKHGHNLILMIYISDKNIKFINIEKNICI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9254; Mature: 9123

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSGRLGYIKNWLHKIIIQFYQYIATSIIQGGLMEENYVLFIYYLRINRKHGHNLILMIY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCEEEEEE
ISDKNIKFINIEKNICI
ECCCCEEEEEECCCCCC
>Mature Secondary Structure 
TSGRLGYIKNWLHKIIIQFYQYIATSIIQGGLMEENYVLFIYYLRINRKHGHNLILMIY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCEEEEEE
ISDKNIKFINIEKNICI
ECCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA