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The map label for this gene is 52842588

Identifier: 52842588

GI number: 52842588

Start: 2683534

End: 2683884

Strand: Direct

Name: 52842588

Synonym: lpg2379

Alternate gene names: NA

Gene position: 2683534-2683884 (Clockwise)

Preceding gene: 52842587

Following gene: 52842589

Centisome position: 78.98

GC content: 38.46

Gene sequence:

>351_bases
ATGAAACGCTGCCCCATTACATATGAAAAAATCAGTGACCAAGAAAACTATTCACAACGTGGATTGCGCTTGCTTTCTCC
TCAATTAAAAAACCTGAGCCCATTAGATTTAAGTGCTGATGAGCAGCGTCAGGAAGCAATTGCTCGAGTAGGAAAGATGT
CTATTCAAGGTGTCCAAAAGAAACTAAGCACAAAACTAAAGATTAAAGAGGGATGTTTTGAAATCGTGGATCAAAATGGT
GACTATATTTTAAAACCACAAAGTGATATTTATCCAGAATTGCCGGAAAACGAAGCCATTACCATGACCCTTGCAAAGAC
CATTGGCCTTGAATGGTTTAGTGTACTCTAA

Upstream 100 bases:

>100_bases
CACTATTACGCAAATATAAAATCGATAAAAATGATTATTTTGGCCAATTGATAATAGTTGGCCAAGATGTCGTAGGCGCA
GTGACTATTGAGGAAATAAG

Downstream 100 bases:

>100_bases
AGATAACAGTTTGACTTACTTCATTAAACGGTTTGATAGAATAGGCCATAATAAAAAATTAGCTTTAGAAGATTTTGCAC
AGCTATCGGGTGAAGATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKRCPITYEKISDQENYSQRGLRLLSPQLKNLSPLDLSADEQRQEAIARVGKMSIQGVQKKLSTKLKIKEGCFEIVDQNG
DYILKPQSDIYPELPENEAITMTLAKTIGLEWFSVL

Sequences:

>Translated_116_residues
MKRCPITYEKISDQENYSQRGLRLLSPQLKNLSPLDLSADEQRQEAIARVGKMSIQGVQKKLSTKLKIKEGCFEIVDQNG
DYILKPQSDIYPELPENEAITMTLAKTIGLEWFSVL
>Mature_116_residues
MKRCPITYEKISDQENYSQRGLRLLSPQLKNLSPLDLSADEQRQEAIARVGKMSIQGVQKKLSTKLKIKEGCFEIVDQNG
DYILKPQSDIYPELPENEAITMTLAKTIGLEWFSVL

Specific function: Unknown

COG id: COG3550

COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13215; Mature: 13215

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRCPITYEKISDQENYSQRGLRLLSPQLKNLSPLDLSADEQRQEAIARVGKMSIQGVQK
CCCCCCCHHHHCCCCCHHHCCHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KLSTKLKIKEGCFEIVDQNGDYILKPQSDIYPELPENEAITMTLAKTIGLEWFSVL
HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEHHHHHHCHHHHHCC
>Mature Secondary Structure
MKRCPITYEKISDQENYSQRGLRLLSPQLKNLSPLDLSADEQRQEAIARVGKMSIQGVQK
CCCCCCCHHHHCCCCCHHHCCHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KLSTKLKIKEGCFEIVDQNGDYILKPQSDIYPELPENEAITMTLAKTIGLEWFSVL
HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEHHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA