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The map label for this gene is 52842589

Identifier: 52842589

GI number: 52842589

Start: 2683844

End: 2684452

Strand: Direct

Name: 52842589

Synonym: lpg2380

Alternate gene names: NA

Gene position: 2683844-2684452 (Clockwise)

Preceding gene: 52842588

Following gene: 52842590

Centisome position: 78.99

GC content: 32.84

Gene sequence:

>609_bases
TTGCAAAGACCATTGGCCTTGAATGGTTTAGTGTACTCTAAAGATAACAGTTTGACTTACTTCATTAAACGGTTTGATAG
AATAGGCCATAATAAAAAATTAGCTTTAGAAGATTTTGCACAGCTATCGGGTGAAGATCGGCATACAAAATATAAAAGTT
CTATGGAAAACGTGCTTGCAATCATAGAACAGTTTTGTACATTCCCCAAAATTGAATTCGTGAAATTATTTAAGTTGACA
TTGTTTAACTTCCTGGTCGGCAATGAAGACATGCACTTAAAAAATTTTTCCCTAATTACCAGAGATAGAAAAATTTCCAT
ATCGCCAGCCTATGATTTACTTAACACTATTGCTCAAAAAAATACAAAAGAAGAAATCGCTTTACCCTTAAAGGGGAAAA
AAAATAATTTGATAACGAATGATTTTCTTAAATACTTTGCCGTTGAAAAATTAGGATTAAATCAGAAGGTCATAGATGGG
ATCGTACAAGAGTTCCATCAAATAATAACTGAATGGCGAAAGCTGGTTGGCTTCAGTTTTTTATCTCAACAGATGCAGGA
AAAATATCTCCAATTGCTAGAACAACGATGCAAGCGATTAAATTTTTGA

Upstream 100 bases:

>100_bases
GGATGTTTTGAAATCGTGGATCAAAATGGTGACTATATTTTAAAACCACAAAGTGATATTTATCCAGAATTGCCGGAAAA
CGAAGCCATTACCATGACCC

Downstream 100 bases:

>100_bases
TTAACTGATATGATGTCTCTTCTTTCCCAAACATCAATTTAATTTTGTTTCCTATAATTGTATTTAGACTTTCTTGATCA
ATTCTCTGCTTTTTATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MQRPLALNGLVYSKDNSLTYFIKRFDRIGHNKKLALEDFAQLSGEDRHTKYKSSMENVLAIIEQFCTFPKIEFVKLFKLT
LFNFLVGNEDMHLKNFSLITRDRKISISPAYDLLNTIAQKNTKEEIALPLKGKKNNLITNDFLKYFAVEKLGLNQKVIDG
IVQEFHQIITEWRKLVGFSFLSQQMQEKYLQLLEQRCKRLNF

Sequences:

>Translated_202_residues
MQRPLALNGLVYSKDNSLTYFIKRFDRIGHNKKLALEDFAQLSGEDRHTKYKSSMENVLAIIEQFCTFPKIEFVKLFKLT
LFNFLVGNEDMHLKNFSLITRDRKISISPAYDLLNTIAQKNTKEEIALPLKGKKNNLITNDFLKYFAVEKLGLNQKVIDG
IVQEFHQIITEWRKLVGFSFLSQQMQEKYLQLLEQRCKRLNF
>Mature_202_residues
MQRPLALNGLVYSKDNSLTYFIKRFDRIGHNKKLALEDFAQLSGEDRHTKYKSSMENVLAIIEQFCTFPKIEFVKLFKLT
LFNFLVGNEDMHLKNFSLITRDRKISISPAYDLLNTIAQKNTKEEIALPLKGKKNNLITNDFLKYFAVEKLGLNQKVIDG
IVQEFHQIITEWRKLVGFSFLSQQMQEKYLQLLEQRCKRLNF

Specific function: Unknown

COG id: COG3550

COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To E.coli hipA, H.influenzae HI_0665 and y4dM [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012893
- InterPro:   IPR012894
- InterPro:   IPR017508 [H]

Pfam domain/function: PF07804 HipA_C; PF07805 HipA_N [H]

EC number: NA

Molecular weight: Translated: 23746; Mature: 23746

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRPLALNGLVYSKDNSLTYFIKRFDRIGHNKKLALEDFAQLSGEDRHTKYKSSMENVLA
CCCCCEECCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
IIEQFCTFPKIEFVKLFKLTLFNFLVGNEDMHLKNFSLITRDRKISISPAYDLLNTIAQK
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHEECCCEEECCHHHHHHHHHHHC
NTKEEIALPLKGKKNNLITNDFLKYFAVEKLGLNQKVIDGIVQEFHQIITEWRKLVGFSF
CCHHHEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSQQMQEKYLQLLEQRCKRLNF
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQRPLALNGLVYSKDNSLTYFIKRFDRIGHNKKLALEDFAQLSGEDRHTKYKSSMENVLA
CCCCCEECCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
IIEQFCTFPKIEFVKLFKLTLFNFLVGNEDMHLKNFSLITRDRKISISPAYDLLNTIAQK
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHEECCCEEECCHHHHHHHHHHHC
NTKEEIALPLKGKKNNLITNDFLKYFAVEKLGLNQKVIDGIVQEFHQIITEWRKLVGFSF
CCHHHEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSQQMQEKYLQLLEQRCKRLNF
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]