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The map label for this gene is gcp

Identifier: 52842567

GI number: 52842567

Start: 2662056

End: 2663057

Strand: Reverse

Name: gcp

Synonym: lpg2357

Alternate gene names: 52842567

Gene position: 2663057-2662056 (Counterclockwise)

Preceding gene: 52842572

Following gene: 52842565

Centisome position: 78.38

GC content: 45.21

Gene sequence:

>1002_bases
ATGCTTGTATTGGGTATAGAGTCTTCCTGTGATGAAACAGGTGTTGCTGTCTATGATTCAGAATCAGGATTATTGTCCCA
CGCCTTGCATTCACAAATTGCCACTCATCGTGTACATGGCGGTGTTGTTCCAGAACTGGCATCAAGAGATCATGTGAATT
ACTTGGTTCCTTTGGTCGATGAGGTACTAACTAAAGCGCAAATTCGTAAAAACCAATTGGATGGAATAGCTTACACCGCA
GGACCTGGATTAATTGGCGCTTTGTTAGTTGGCTCCTGCTTTGCCAAAAGTCTCGCCTACGCCTTAAATATCCCGGCATT
GGCTATTCATCATTTGGAAGCCCATCTGTTAGCCGCAAAAATGGAAACCCCATCTCTGGACTTTCCCTTTATTGCCCTGT
TGGTTTCCGGTGGCCATTGTCAACTGATAGAAGTAAATAATATTGGTGAGTATCGATTATTAGGAGATACTCTCGACGAT
GCAGTAGGAGAAGCCTTTGACAAGACAGCCAAACTGATGGGGATTCCCTATCCTGGAGGAGCCGTGTTGGCAAATTTGGC
TGATCAATGTTTATCAACTCCCTATCAATTTCCCCGTCCCATGACTGACAGGCCAGGCTTGGACTTTAGTTTTAGCGGAC
TAAAAACTCATGCCTTAAACACCTGGAATCAAAGTGAAAAAAAAGAAAGCGACCGCTCCGAAATTGCAAAAGCATTCCAA
CAAGCAGTAGTTGAAACACTAATTATAAAATGCAAAAGAGCAATTAAAGAGTCTCAATCAAAGCGCCTTGTGGTAGCCGG
TGGAGTAGGAGCCAATAAAGCGTTGCGCAGCGCTTTGCAAAAATGGATTAAGGACATCCAAGGGGAAGTGTACTTCCCCG
CTCTGGAATATTGCACAGATAATGGTGCAATGGTCGCTTATGCAGGATGTTTGCGCATGATGCGGGGGGAGATTGATGGG
GGGTTGGGGGTTATAGTCAAACCTCGTTGGCCCCTCGCTTGA

Upstream 100 bases:

>100_bases
ATCAAGACATTGTTCTTTAATTTAATGGTATCTTTTGTCTGTGATATAATTGAAAAATGATTAAAATCTGGAAAATTGAT
TCCGATTATTGAGGTAGTTC

Downstream 100 bases:

>100_bases
ACGCCCGTCTTCGGCGCATCTTGCCAGATCATTGCTCTAAAAAATGCTCATGTACTCATCTATACACTCCGCTTTTTTAG
TCGCAATGATCTGGCAATTT

Product: putative DNA-binding/iron metalloprotein/AP endonuclease

Products: NA

Alternate protein names: Glycoprotease [H]

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MLVLGIESSCDETGVAVYDSESGLLSHALHSQIATHRVHGGVVPELASRDHVNYLVPLVDEVLTKAQIRKNQLDGIAYTA
GPGLIGALLVGSCFAKSLAYALNIPALAIHHLEAHLLAAKMETPSLDFPFIALLVSGGHCQLIEVNNIGEYRLLGDTLDD
AVGEAFDKTAKLMGIPYPGGAVLANLADQCLSTPYQFPRPMTDRPGLDFSFSGLKTHALNTWNQSEKKESDRSEIAKAFQ
QAVVETLIIKCKRAIKESQSKRLVVAGGVGANKALRSALQKWIKDIQGEVYFPALEYCTDNGAMVAYAGCLRMMRGEIDG
GLGVIVKPRWPLA

Sequences:

>Translated_333_residues
MLVLGIESSCDETGVAVYDSESGLLSHALHSQIATHRVHGGVVPELASRDHVNYLVPLVDEVLTKAQIRKNQLDGIAYTA
GPGLIGALLVGSCFAKSLAYALNIPALAIHHLEAHLLAAKMETPSLDFPFIALLVSGGHCQLIEVNNIGEYRLLGDTLDD
AVGEAFDKTAKLMGIPYPGGAVLANLADQCLSTPYQFPRPMTDRPGLDFSFSGLKTHALNTWNQSEKKESDRSEIAKAFQ
QAVVETLIIKCKRAIKESQSKRLVVAGGVGANKALRSALQKWIKDIQGEVYFPALEYCTDNGAMVAYAGCLRMMRGEIDG
GLGVIVKPRWPLA
>Mature_333_residues
MLVLGIESSCDETGVAVYDSESGLLSHALHSQIATHRVHGGVVPELASRDHVNYLVPLVDEVLTKAQIRKNQLDGIAYTA
GPGLIGALLVGSCFAKSLAYALNIPALAIHHLEAHLLAAKMETPSLDFPFIALLVSGGHCQLIEVNNIGEYRLLGDTLDD
AVGEAFDKTAKLMGIPYPGGAVLANLADQCLSTPYQFPRPMTDRPGLDFSFSGLKTHALNTWNQSEKKESDRSEIAKAFQ
QAVVETLIIKCKRAIKESQSKRLVVAGGVGANKALRSALQKWIKDIQGEVYFPALEYCTDNGAMVAYAGCLRMMRGEIDG
GLGVIVKPRWPLA

Specific function: Could Be A Metalloprotease. [C]

COG id: COG0533

COG function: function code O; Metal-dependent proteases with possible chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Homo sapiens, GI116812636, Length=359, Percent_Identity=33.1476323119777, Blast_Score=175, Evalue=5e-44,
Organism=Homo sapiens, GI8923380, Length=313, Percent_Identity=27.4760383386581, Blast_Score=117, Evalue=1e-26,
Organism=Escherichia coli, GI1789445, Length=333, Percent_Identity=57.3573573573574, Blast_Score=404, Evalue=1e-114,
Organism=Caenorhabditis elegans, GI17557464, Length=327, Percent_Identity=29.3577981651376, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71995670, Length=323, Percent_Identity=30.3405572755418, Blast_Score=121, Evalue=5e-28,
Organism=Saccharomyces cerevisiae, GI6320099, Length=363, Percent_Identity=30.8539944903581, Blast_Score=152, Evalue=8e-38,
Organism=Saccharomyces cerevisiae, GI6322891, Length=352, Percent_Identity=26.7045454545455, Blast_Score=109, Evalue=5e-25,
Organism=Drosophila melanogaster, GI20129063, Length=341, Percent_Identity=34.6041055718475, Blast_Score=199, Evalue=2e-51,
Organism=Drosophila melanogaster, GI21357207, Length=323, Percent_Identity=29.1021671826625, Blast_Score=138, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022450
- InterPro:   IPR000905
- InterPro:   IPR017860
- InterPro:   IPR017861 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: =3.4.24.57 [H]

Molecular weight: Translated: 35865; Mature: 35865

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS01016 GLYCOPROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLGIESSCDETGVAVYDSESGLLSHALHSQIATHRVHGGVVPELASRDHVNYLVPLVD
CEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHH
EVLTKAQIRKNQLDGIAYTAGPGLIGALLVGSCFAKSLAYALNIPALAIHHLEAHLLAAK
HHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
METPSLDFPFIALLVSGGHCQLIEVNNIGEYRLLGDTLDDAVGEAFDKTAKLMGIPYPGG
CCCCCCCCCHHHHEECCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCH
AVLANLADQCLSTPYQFPRPMTDRPGLDFSFSGLKTHALNTWNQSEKKESDRSEIAKAFQ
HHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHH
QAVVETLIIKCKRAIKESQSKRLVVAGGVGANKALRSALQKWIKDIQGEVYFPALEYCTD
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEECHHHHHCC
NGAMVAYAGCLRMMRGEIDGGLGVIVKPRWPLA
CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MLVLGIESSCDETGVAVYDSESGLLSHALHSQIATHRVHGGVVPELASRDHVNYLVPLVD
CEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHH
EVLTKAQIRKNQLDGIAYTAGPGLIGALLVGSCFAKSLAYALNIPALAIHHLEAHLLAAK
HHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
METPSLDFPFIALLVSGGHCQLIEVNNIGEYRLLGDTLDDAVGEAFDKTAKLMGIPYPGG
CCCCCCCCCHHHHEECCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCH
AVLANLADQCLSTPYQFPRPMTDRPGLDFSFSGLKTHALNTWNQSEKKESDRSEIAKAFQ
HHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHH
QAVVETLIIKCKRAIKESQSKRLVVAGGVGANKALRSALQKWIKDIQGEVYFPALEYCTD
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEECHHHHHCC
NGAMVAYAGCLRMMRGEIDGGLGVIVKPRWPLA
CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA