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The map label for this gene is 52842485

Identifier: 52842485

GI number: 52842485

Start: 2575202

End: 2575693

Strand: Reverse

Name: 52842485

Synonym: lpg2272

Alternate gene names: NA

Gene position: 2575693-2575202 (Counterclockwise)

Preceding gene: 52842486

Following gene: 52842480

Centisome position: 75.81

GC content: 37.4

Gene sequence:

>492_bases
ATGATGATTATCAGATTCTCAAAAGTGTTGCTTGTTGTTGCTGTTTCCTTTTTTTGCTTACTTACTGCATTTGGAAACAT
CACTGATTATTCCGCCAATTTTCCTGCTGTGGTAAAAGTATTAACCATGAGCGATATATTTCCTGATTCCACCATCACCT
ATCGAGCAATTACTAGTCCAGTTCTGCATTATGTTGCATTTATTATCATTGTTATCCTGGAATTATTAACCGCCATATTT
TGTGGAATTGGTGCGTGGAAATTGTTTAAGGCAAGAAATGAAAGTGCTTCTGTTTTTAATCATTCCAAGAACTGGGCTAT
TGGAGGTCTTACGTTGGGTTTTGTAACCTGGCAAGTGATTTTTATGTCCATAGGAGGAGAGTGGTTTGGTATGTGGATGT
CTCCCACGCTCAACTCAGCCCTTACCACAGCTTTTCATATCTTCATTACTATTTTAGCCGTTATGATTTATTTGGTGATT
AAGGATGAATAG

Upstream 100 bases:

>100_bases
AGCGAACCTGGCTTGGTGAGAAACGAGCATAAGCATCCTCTCCACGAACGTTCTTATCAATTAGGTGATACATATTTTTT
AACTTGTTTCAAAGGATGAA

Downstream 100 bases:

>100_bases
AGAAATTCCAGAGATTAATTTGTAACAGAGTAGCCTCCTATCGGAGCGGCTGTTTAGAAAGTATTTAAACATGAGGTGAC
TTATGTATTGCCTTAATTTT

Product: transmembrane protein

Products: NA

Alternate protein names: Integral Membrane Protein; Transmembrane Protein

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MMIIRFSKVLLVVAVSFFCLLTAFGNITDYSANFPAVVKVLTMSDIFPDSTITYRAITSPVLHYVAFIIIVILELLTAIF
CGIGAWKLFKARNESASVFNHSKNWAIGGLTLGFVTWQVIFMSIGGEWFGMWMSPTLNSALTTAFHIFITILAVMIYLVI
KDE

Sequences:

>Translated_163_residues
MMIIRFSKVLLVVAVSFFCLLTAFGNITDYSANFPAVVKVLTMSDIFPDSTITYRAITSPVLHYVAFIIIVILELLTAIF
CGIGAWKLFKARNESASVFNHSKNWAIGGLTLGFVTWQVIFMSIGGEWFGMWMSPTLNSALTTAFHIFITILAVMIYLVI
KDE
>Mature_163_residues
MMIIRFSKVLLVVAVSFFCLLTAFGNITDYSANFPAVVKVLTMSDIFPDSTITYRAITSPVLHYVAFIIIVILELLTAIF
CGIGAWKLFKARNESASVFNHSKNWAIGGLTLGFVTWQVIFMSIGGEWFGMWMSPTLNSALTTAFHIFITILAVMIYLVI
KDE

Specific function: Unknown

COG id: COG5472

COG function: function code S; Predicted small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18190; Mature: 18190

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIIRFSKVLLVVAVSFFCLLTAFGNITDYSANFPAVVKVLTMSDIFPDSTITYRAITSP
CEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
VLHYVAFIIIVILELLTAIFCGIGAWKLFKARNESASVFNHSKNWAIGGLTLGFVTWQVI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCCCEECHHHHHHHHHHHH
FMSIGGEWFGMWMSPTLNSALTTAFHIFITILAVMIYLVIKDE
HHHHCCHHEEHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMIIRFSKVLLVVAVSFFCLLTAFGNITDYSANFPAVVKVLTMSDIFPDSTITYRAITSP
CEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
VLHYVAFIIIVILELLTAIFCGIGAWKLFKARNESASVFNHSKNWAIGGLTLGFVTWQVI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCCCEECHHHHHHHHHHHH
FMSIGGEWFGMWMSPTLNSALTTAFHIFITILAVMIYLVIKDE
HHHHCCHHEEHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA