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The map label for this gene is ugpB

Identifier: 52842486

GI number: 52842486

Start: 2575835

End: 2577148

Strand: Reverse

Name: ugpB

Synonym: lpg2273

Alternate gene names: 52842486

Gene position: 2577148-2575835 (Counterclockwise)

Preceding gene: 52842487

Following gene: 52842485

Centisome position: 75.85

GC content: 41.7

Gene sequence:

>1314_bases
ATGAAAATACTCTTTTTGCTTTTGTTAATTTTTCTGAGTGTCATTCCTGCTCAGGCCAAACCAGTTGAGCTGGTTTTTTG
GCATGCGATGGCAGGGCATTTGGGTGATGAAGTCCGTTTGCTTGCTGATGATTTTAATAAAAGTCAGAATCAATATCGAG
TCAAACCGATTTACAAAGGAAATTATACGGAAACTCTTACCAATTTTGCTGCTGCATTCAGAGCTCGTCAAGCACCATCA
ATAGTTCAAATTTTTGAAGTAGGCACTTCAATTATGTTAGCTCCCCCTGGTGTGATCAAACCCGTTGATTTGTTGATGAG
TGAGCAGGGGATCAGTTTGCCTAAAGATGATTTTATTCAATCAGTGCGTGAGTTTTATAGCAGGGATGGGCAATTAATGG
CGATGCCTTTCAATCTCTCGGCACCAGTTCTGTACTATAATGCTGACATTTTAGCCAAGGTGGGATATGGCAAGCATAAC
TTCCCTCAAACCTGGTCAGCAATGGAAATAATGGCAGAAAAAATTAAAAAAGCCGGTTATGACTGTACTTATACTACGGC
TTATCCTGGATGGGTGTTATTTGAATCTTTTCTTGCTATCCATGGGTTGCCCATAACTCAAGGTAATCCTGCTCGTGCTG
TTTTCCATACTCCCCAATTAATGGCTCATTTTCAACGTCTAAAGCGCTGGCATGATTTGCATTATTTTCGTTATGGTGGT
CGTGTTGATGATGCTACCATTTTATTTACCAGTAGTGTTTGTCCTTTATTTAGTCAATCATCGGGGGCTTATAATAGTTT
GTCTGCCCTTGTTCCTTTTCATTTGGGTGTTGCAACAATGCCTTTGGATACGGGGGCCAGTCCGATAAGACATGCGAATG
TGGCAGGGGGTGCTGCTCTATGGGCTGTAGGAGGACAAACAGAAGAGCAATATCGAGGAATTGCCAGATTTTTTGCATTT
ATTGCAAAACCTGAAGTGCAAAAGCGCTGGCATGAGCATACGGGTTATTTGCCGTTGGGGTTAAAAGGAATTTACGCTAG
CATTGTGCAATCAAGTCAACATCCCGCTTTATTATTAGCCAGAACAGATCTCGAGGACAATTTACCTGAGAAACCTTATA
AACACATGGGCCCGCAAAATCAAATTCGTGGAATTAATGATGAGGTTTTAGAGGCAATGTTTGCAGATTTGATGAGTCCG
GAGGAAGCTCTGAACGAGGCGACGATCAGAGCGAATCATTTATTGTTACGTTTTGCCAGAAATACTCAAAGAGAAAGGGT
AGTTGATGATAAAGTGGGCAAGGGTTTGGGCTAA

Upstream 100 bases:

>100_bases
ATGTAGTATGCGCCTATACTGTAAACCGTAAACGTTTGGCCAAAAAGTTATTTGATTGGGGTGTTGATGCTCTCTTTAGT
GATTATCCAGACTTGTTAAA

Downstream 100 bases:

>100_bases
GATTTTTTGATTCATCGGTTTGGTTAGCGAAGCTTGAAGAAAGCGAACCTGGCTTGGTGAGAAACGAGCATAAGCATCCT
CTCCACGAACGTTCTTATCA

Product: glycerol-3-phosphate binding periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MKILFLLLLIFLSVIPAQAKPVELVFWHAMAGHLGDEVRLLADDFNKSQNQYRVKPIYKGNYTETLTNFAAAFRARQAPS
IVQIFEVGTSIMLAPPGVIKPVDLLMSEQGISLPKDDFIQSVREFYSRDGQLMAMPFNLSAPVLYYNADILAKVGYGKHN
FPQTWSAMEIMAEKIKKAGYDCTYTTAYPGWVLFESFLAIHGLPITQGNPARAVFHTPQLMAHFQRLKRWHDLHYFRYGG
RVDDATILFTSSVCPLFSQSSGAYNSLSALVPFHLGVATMPLDTGASPIRHANVAGGAALWAVGGQTEEQYRGIARFFAF
IAKPEVQKRWHEHTGYLPLGLKGIYASIVQSSQHPALLLARTDLEDNLPEKPYKHMGPQNQIRGINDEVLEAMFADLMSP
EEALNEATIRANHLLLRFARNTQRERVVDDKVGKGLG

Sequences:

>Translated_437_residues
MKILFLLLLIFLSVIPAQAKPVELVFWHAMAGHLGDEVRLLADDFNKSQNQYRVKPIYKGNYTETLTNFAAAFRARQAPS
IVQIFEVGTSIMLAPPGVIKPVDLLMSEQGISLPKDDFIQSVREFYSRDGQLMAMPFNLSAPVLYYNADILAKVGYGKHN
FPQTWSAMEIMAEKIKKAGYDCTYTTAYPGWVLFESFLAIHGLPITQGNPARAVFHTPQLMAHFQRLKRWHDLHYFRYGG
RVDDATILFTSSVCPLFSQSSGAYNSLSALVPFHLGVATMPLDTGASPIRHANVAGGAALWAVGGQTEEQYRGIARFFAF
IAKPEVQKRWHEHTGYLPLGLKGIYASIVQSSQHPALLLARTDLEDNLPEKPYKHMGPQNQIRGINDEVLEAMFADLMSP
EEALNEATIRANHLLLRFARNTQRERVVDDKVGKGLG
>Mature_437_residues
MKILFLLLLIFLSVIPAQAKPVELVFWHAMAGHLGDEVRLLADDFNKSQNQYRVKPIYKGNYTETLTNFAAAFRARQAPS
IVQIFEVGTSIMLAPPGVIKPVDLLMSEQGISLPKDDFIQSVREFYSRDGQLMAMPFNLSAPVLYYNADILAKVGYGKHN
FPQTWSAMEIMAEKIKKAGYDCTYTTAYPGWVLFESFLAIHGLPITQGNPARAVFHTPQLMAHFQRLKRWHDLHYFRYGG
RVDDATILFTSSVCPLFSQSSGAYNSLSALVPFHLGVATMPLDTGASPIRHANVAGGAALWAVGGQTEEQYRGIARFFAF
IAKPEVQKRWHEHTGYLPLGLKGIYASIVQSSQHPALLLARTDLEDNLPEKPYKHMGPQNQIRGINDEVLEAMFADLMSP
EEALNEATIRANHLLLRFARNTQRERVVDDKVGKGLG

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=412, Percent_Identity=36.8932038834951, Blast_Score=273, Evalue=2e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48853; Mature: 48853

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILFLLLLIFLSVIPAQAKPVELVFWHAMAGHLGDEVRLLADDFNKSQNQYRVKPIYKG
CHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCHHEEEHHHHCCCCCCEEEEEEECC
NYTETLTNFAAAFRARQAPSIVQIFEVGTSIMLAPPGVIKPVDLLMSEQGISLPKDDFIQ
CHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCCCHHHHHHCCCCCCCCHHHHHH
SVREFYSRDGQLMAMPFNLSAPVLYYNADILAKVGYGKHNFPQTWSAMEIMAEKIKKAGY
HHHHHHCCCCCEEEEECCCCCCEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC
DCTYTTAYPGWVLFESFLAIHGLPITQGNPARAVFHTPQLMAHFQRLKRWHDLHYFRYGG
CEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHEEECC
RVDDATILFTSSVCPLFSQSSGAYNSLSALVPFHLGVATMPLDTGASPIRHANVAGGAAL
CCCCEEEEEECCCCCHHCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEE
WAVGGQTEEQYRGIARFFAFIAKPEVQKRWHEHTGYLPLGLKGIYASIVQSSQHPALLLA
EEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEE
RTDLEDNLPEKPYKHMGPQNQIRGINDEVLEAMFADLMSPEEALNEATIRANHLLLRFAR
ECCCCCCCCCCCHHHCCCHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
NTQRERVVDDKVGKGLG
CCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKILFLLLLIFLSVIPAQAKPVELVFWHAMAGHLGDEVRLLADDFNKSQNQYRVKPIYKG
CHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCHHEEEHHHHCCCCCCEEEEEEECC
NYTETLTNFAAAFRARQAPSIVQIFEVGTSIMLAPPGVIKPVDLLMSEQGISLPKDDFIQ
CHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCCCHHHHHHCCCCCCCCHHHHHH
SVREFYSRDGQLMAMPFNLSAPVLYYNADILAKVGYGKHNFPQTWSAMEIMAEKIKKAGY
HHHHHHCCCCCEEEEECCCCCCEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC
DCTYTTAYPGWVLFESFLAIHGLPITQGNPARAVFHTPQLMAHFQRLKRWHDLHYFRYGG
CEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHEEECC
RVDDATILFTSSVCPLFSQSSGAYNSLSALVPFHLGVATMPLDTGASPIRHANVAGGAAL
CCCCEEEEEECCCCCHHCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEE
WAVGGQTEEQYRGIARFFAFIAKPEVQKRWHEHTGYLPLGLKGIYASIVQSSQHPALLLA
EEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEE
RTDLEDNLPEKPYKHMGPQNQIRGINDEVLEAMFADLMSPEEALNEATIRANHLLLRFAR
ECCCCCCCCCCCHHHCCCHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
NTQRERVVDDKVGKGLG
CCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA