BacMap

Definition	Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome.
Accession	NC_002942
Length	3,397,754

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The map label for this gene is cbpA

Identifier: 52842476

GI number: 52842476

Start: 2566215

End: 2567105

Strand: Direct

Name: cbpA

Synonym: lpg2263

Alternate gene names: 52842476

Gene position: 2566215-2567105 (Clockwise)

Preceding gene: 52842475

Following gene: 52842477

Centisome position: 75.53

GC content: 41.64

Gene sequence:

>891_bases
ATGGATAAAGACTACTATAAAATCATGGGAGTCAGTCAGGATGCTTCTGAAAAAGACATCAAAATGGCTTACCGAAAATT
AGCCCGCAAATATCACCCCGATATTAGTAAAGAACCAGATGCTGAAGAACGATTTAAAGAAATGGCAGAAGCCTATGAAG
TACTGAAAGACCCTAAAAAAAGATCCGAATATGATCAATATCTGAAATACAAGGAATTCAATCCCCAAAGCGATGGATTT
ACCGGGCGAAGAACTCAAGAGCAACCCTTTCAGGAATTTCATTTTGACAGCGATTTTTTTGAAACCTTGTTTGGACATTC
GCGCTATCAACAGCAACCGATGACTGGTCAAAACTATCATGGCAAAATCACTATCAGTCTGGAGGAAGCTTACCATGGAG
CTGTTAAAAACTTACAAGTTCCTGTTGAACAAGGCACAGAGACTAAAATACAGACCCTGAAAGTTAAAATCCCTGCAGGG
GTTAAATCAGGACAACAAATTCGCTTGGCAGGACAAGGAGGCAGTGGAAGTGGAGGGGGGGCTCGTGGCGACCTTTATCT
AACAGTCGAAGTGATGAAACACCCCATATTTGATGTCATGGAGAATGATATTTATCTGACATTACCTGTCACACCGTGGG
AAGCTGCTTTAGGAGCTACGGTTGTCATACCAACCCTGGCAGGAAAAATCGATTTAAAAATCCCTCCGGGCTCACAAGGC
GGGCAAAAACTCAGAATTAAAAATCGCGGATTACCAGGTTCACCCCCTGGTAATCAATATGTTCTATTAAAAATTATTAC
CCCCCCTGCTCAAACTGAAGAAGCAAAAGCTTTATATAAAAAAATGGCGGAGGTAATGCCTTACAACCCTCGTAAGACTA
TGGGAGTATAA

Upstream 100 bases:

>100_bases
TATTCCTGCGAATGAAGAAAAAATGATGGCTATGCATACCTTGACAGCCCTCAGGACGTAAAGGCGTATTGTTTACTGGC
ATAGGTAATGAGTATAAAAA

Downstream 100 bases:

>100_bases
GCATGGGCAAAGACAATCTTTTAATAGGCATGCTTATCGAAGAAACCACAACGATTTCTTTTATTGAAGTATGCCAAAAG
TATCATATTCCTGAAGAATT

Product: curved DNA binding protein DnaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MDKDYYKIMGVSQDASEKDIKMAYRKLARKYHPDISKEPDAEERFKEMAEAYEVLKDPKKRSEYDQYLKYKEFNPQSDGF
TGRRTQEQPFQEFHFDSDFFETLFGHSRYQQQPMTGQNYHGKITISLEEAYHGAVKNLQVPVEQGTETKIQTLKVKIPAG
VKSGQQIRLAGQGGSGSGGGARGDLYLTVEVMKHPIFDVMENDIYLTLPVTPWEAALGATVVIPTLAGKIDLKIPPGSQG
GQKLRIKNRGLPGSPPGNQYVLLKIITPPAQTEEAKALYKKMAEVMPYNPRKTMGV

Sequences:

>Translated_296_residues
MDKDYYKIMGVSQDASEKDIKMAYRKLARKYHPDISKEPDAEERFKEMAEAYEVLKDPKKRSEYDQYLKYKEFNPQSDGF
TGRRTQEQPFQEFHFDSDFFETLFGHSRYQQQPMTGQNYHGKITISLEEAYHGAVKNLQVPVEQGTETKIQTLKVKIPAG
VKSGQQIRLAGQGGSGSGGGARGDLYLTVEVMKHPIFDVMENDIYLTLPVTPWEAALGATVVIPTLAGKIDLKIPPGSQG
GQKLRIKNRGLPGSPPGNQYVLLKIITPPAQTEEAKALYKKMAEVMPYNPRKTMGV
>Mature_296_residues
MDKDYYKIMGVSQDASEKDIKMAYRKLARKYHPDISKEPDAEERFKEMAEAYEVLKDPKKRSEYDQYLKYKEFNPQSDGF
TGRRTQEQPFQEFHFDSDFFETLFGHSRYQQQPMTGQNYHGKITISLEEAYHGAVKNLQVPVEQGTETKIQTLKVKIPAG
VKSGQQIRLAGQGGSGSGGGARGDLYLTVEVMKHPIFDVMENDIYLTLPVTPWEAALGATVVIPTLAGKIDLKIPPGSQG
GQKLRIKNRGLPGSPPGNQYVLLKIITPPAQTEEAKALYKKMAEVMPYNPRKTMGV

Specific function: DNA-binding protein that preferentially recognizes a curved DNA sequence. It is probably a functional analog of DnaJ; displays overlapping activities with DnaJ, but functions under different conditions, probably acting as a molecular chaperone in an adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI6631085, Length=306, Percent_Identity=32.0261437908497, Blast_Score=121, Evalue=9e-28,
Organism=Homo sapiens, GI5453690, Length=305, Percent_Identity=30.1639344262295, Blast_Score=118, Evalue=6e-27,
Organism=Homo sapiens, GI201862518, Length=346, Percent_Identity=28.9017341040462, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI201862587, Length=346, Percent_Identity=28.9017341040462, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI56549115, Length=346, Percent_Identity=28.9017341040462, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI39204547, Length=318, Percent_Identity=26.1006289308176, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI7706495, Length=332, Percent_Identity=29.8192771084337, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI205360838, Length=351, Percent_Identity=29.6296296296296, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI205360840, Length=351, Percent_Identity=29.6296296296296, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI56687498, Length=109, Percent_Identity=43.1192660550459, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI194328760, Length=134, Percent_Identity=39.5522388059701, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI194328758, Length=134, Percent_Identity=39.5522388059701, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI9558755, Length=63, Percent_Identity=60.3174603174603, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI4504511, Length=140, Percent_Identity=35, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI194306642, Length=65, Percent_Identity=55.3846153846154, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI194306640, Length=65, Percent_Identity=55.3846153846154, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI47777312, Length=107, Percent_Identity=47.6635514018692, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=59.0909090909091, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=59.0909090909091, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI72534740, Length=105, Percent_Identity=40, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI22749377, Length=65, Percent_Identity=50.7692307692308, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI5031741, Length=66, Percent_Identity=54.5454545454545, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI23503241, Length=67, Percent_Identity=56.7164179104478, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI27151736, Length=116, Percent_Identity=43.1034482758621, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI88501736, Length=116, Percent_Identity=43.1034482758621, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI21361912, Length=65, Percent_Identity=47.6923076923077, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI21553335, Length=66, Percent_Identity=53.030303030303, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI217035105, Length=70, Percent_Identity=42.8571428571429, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI24308127, Length=67, Percent_Identity=46.2686567164179, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1787235, Length=307, Percent_Identity=46.9055374592834, Blast_Score=252, Evalue=2e-68,
Organism=Escherichia coli, GI1786197, Length=347, Percent_Identity=33.4293948126801, Blast_Score=159, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17553096, Length=347, Percent_Identity=28.2420749279539, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17553098, Length=347, Percent_Identity=28.2420749279539, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17534355, Length=67, Percent_Identity=59.7014925373134, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17507263, Length=62, Percent_Identity=56.4516129032258, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI115532476, Length=65, Percent_Identity=52.3076923076923, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17538236, Length=65, Percent_Identity=52.3076923076923, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI212645553, Length=66, Percent_Identity=46.969696969697, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17554644, Length=87, Percent_Identity=44.8275862068966, Blast_Score=71, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI115532378, Length=99, Percent_Identity=38.3838383838384, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17563890, Length=65, Percent_Identity=50.7692307692308, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6324265, Length=139, Percent_Identity=38.1294964028777, Blast_Score=80, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6323870, Length=205, Percent_Identity=32.6829268292683, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6321094, Length=162, Percent_Identity=32.0987654320988, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6323119, Length=66, Percent_Identity=50, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6324321, Length=62, Percent_Identity=53.2258064516129, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6322194, Length=109, Percent_Identity=40.3669724770642, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322388, Length=84, Percent_Identity=44.047619047619, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323813, Length=63, Percent_Identity=47.6190476190476, Blast_Score=62, Evalue=8e-11,
Organism=Drosophila melanogaster, GI85726398, Length=354, Percent_Identity=29.3785310734463, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24658562, Length=343, Percent_Identity=29.1545189504373, Blast_Score=104, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24658555, Length=343, Percent_Identity=29.1545189504373, Blast_Score=104, Evalue=7e-23,
Organism=Drosophila melanogaster, GI18858081, Length=343, Percent_Identity=27.9883381924198, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI45549272, Length=68, Percent_Identity=58.8235294117647, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI45552813, Length=68, Percent_Identity=58.8235294117647, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI45552811, Length=68, Percent_Identity=58.8235294117647, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24654066, Length=109, Percent_Identity=46.7889908256881, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24654070, Length=109, Percent_Identity=46.7889908256881, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24654068, Length=109, Percent_Identity=46.7889908256881, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24654072, Length=109, Percent_Identity=46.7889908256881, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24668492, Length=67, Percent_Identity=52.2388059701493, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI20129487, Length=137, Percent_Identity=36.4963503649635, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24584014, Length=137, Percent_Identity=36.4963503649635, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI161077138, Length=66, Percent_Identity=56.0606060606061, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI19920464, Length=65, Percent_Identity=46.1538461538462, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355911, Length=103, Percent_Identity=41.747572815534, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24584630, Length=69, Percent_Identity=50.7246376811594, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI17648033, Length=69, Percent_Identity=50.7246376811594, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21358273, Length=65, Percent_Identity=50.7692307692308, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24641698, Length=65, Percent_Identity=41.5384615384615, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24641696, Length=65, Percent_Identity=41.5384615384615, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24646562, Length=62, Percent_Identity=53.2258064516129, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24646560, Length=62, Percent_Identity=53.2258064516129, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24646558, Length=62, Percent_Identity=53.2258064516129, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24646556, Length=62, Percent_Identity=53.2258064516129, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21357547, Length=62, Percent_Identity=53.2258064516129, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24643180, Length=125, Percent_Identity=31.2, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 33281; Mature: 33281

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKDYYKIMGVSQDASEKDIKMAYRKLARKYHPDISKEPDAEERFKEMAEAYEVLKDPKK
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHH
RSEYDQYLKYKEFNPQSDGFTGRRTQEQPFQEFHFDSDFFETLFGHSRYQQQPMTGQNYH
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCHHHHCCCCCCCCCC
GKITISLEEAYHGAVKNLQVPVEQGTETKIQTLKVKIPAGVKSGQQIRLAGQGGSGSGGG
CEEEEEEHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCC
ARGDLYLTVEVMKHPIFDVMENDIYLTLPVTPWEAALGATVVIPTLAGKIDLKIPPGSQG
CCCEEEEEEHHHHCCHHHHHCCCEEEEEECCCHHHHHCCEEEEEECCCEEEEEECCCCCC
GQKLRIKNRGLPGSPPGNQYVLLKIITPPAQTEEAKALYKKMAEVMPYNPRKTMGV
CCEEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDKDYYKIMGVSQDASEKDIKMAYRKLARKYHPDISKEPDAEERFKEMAEAYEVLKDPKK
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHH
RSEYDQYLKYKEFNPQSDGFTGRRTQEQPFQEFHFDSDFFETLFGHSRYQQQPMTGQNYH
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCHHHHCCCCCCCCCC
GKITISLEEAYHGAVKNLQVPVEQGTETKIQTLKVKIPAGVKSGQQIRLAGQGGSGSGGG
CEEEEEEHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCC
ARGDLYLTVEVMKHPIFDVMENDIYLTLPVTPWEAALGATVVIPTLAGKIDLKIPPGSQG
CCCEEEEEEHHHHCCHHHHHCCCEEEEEECCCHHHHHCCEEEEEECCCEEEEEECCCCCC
GQKLRIKNRGLPGSPPGNQYVLLKIITPPAQTEEAKALYKKMAEVMPYNPRKTMGV
CCEEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA