Click here to switch to the map view.

The map label for this gene is 52842398

Identifier: 52842398

GI number: 52842398

Start: 2458829

End: 2459137

Strand: Reverse

Name: 52842398

Synonym: lpg2185

Alternate gene names: NA

Gene position: 2459137-2458829 (Counterclockwise)

Preceding gene: 52842400

Following gene: 52842397

Centisome position: 72.38

GC content: 34.3

Gene sequence:

>309_bases
ATGCTCCTGAAAGTGCCTGGCTACGCACAAAAATTATTTGTCTGGCAAAGAGTTATAATAAAAACAACCATAACAGAGAG
AGAATTTGAGTATAAACAAATTAACCTGGAAGGTCTATTTACCTTAAGTATAGCCAGAATTCAGCAAGATTTTGTATGGG
AATACCATATCCGCTCCCTGATAGTCATACTCTTATACATAAGTATTAATCCATGTAAAATTCATATTTTTTATATGGAA
CTTAGATGGCTAGTTGTGAATGGATTATTAATGAATCCAAGGAAGCGAACTTCGGTGATAAGCGGTTAG

Upstream 100 bases:

>100_bases
GAATCAATCCCAGGAAATTGACAATTCATCCCAATGATGGCAATGGGTTCATTCAAAAGGTTTTTGGTTTTGTTTTTCAT
AGTTACGTTTACCACTTACA

Downstream 100 bases:

>100_bases
ATAAGCGTTATGGAGATATCTTAAGCGGGTTACTTAGCTCACCAAATGCAAGCATTCCAACTACATTTCAAAGTTGGAAT
GAAACACTGGCAGCCTACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MLLKVPGYAQKLFVWQRVIIKTTITEREFEYKQINLEGLFTLSIARIQQDFVWEYHIRSLIVILLYISINPCKIHIFYME
LRWLVVNGLLMNPRKRTSVISG

Sequences:

>Translated_102_residues
MLLKVPGYAQKLFVWQRVIIKTTITEREFEYKQINLEGLFTLSIARIQQDFVWEYHIRSLIVILLYISINPCKIHIFYME
LRWLVVNGLLMNPRKRTSVISG
>Mature_102_residues
MLLKVPGYAQKLFVWQRVIIKTTITEREFEYKQINLEGLFTLSIARIQQDFVWEYHIRSLIVILLYISINPCKIHIFYME
LRWLVVNGLLMNPRKRTSVISG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12200; Mature: 12200

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKVPGYAQKLFVWQRVIIKTTITEREFEYKQINLEGLFTLSIARIQQDFVWEYHIRSL
CEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHH
IVILLYISINPCKIHIFYMELRWLVVNGLLMNPRKRTSVISG
HHHHHHEECCCEEEEEEEHEEEEHHHCCEEECCCCCCCCCCC
>Mature Secondary Structure
MLLKVPGYAQKLFVWQRVIIKTTITEREFEYKQINLEGLFTLSIARIQQDFVWEYHIRSL
CEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHH
IVILLYISINPCKIHIFYMELRWLVVNGLLMNPRKRTSVISG
HHHHHHEECCCEEEEEEEHEEEEHHHCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA