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The map label for this gene is nolF [H]

Identifier: 52842349

GI number: 52842349

Start: 2381596

End: 2382564

Strand: Reverse

Name: nolF [H]

Synonym: lpg2135

Alternate gene names: 52842349

Gene position: 2382564-2381596 (Counterclockwise)

Preceding gene: 52842350

Following gene: 52842348

Centisome position: 70.12

GC content: 43.86

Gene sequence:

>969_bases
ATGAGATTGCAGCTTAAAATTAGAATGATGATCATGACTGTTTTTTTTCTTGGCTTGCTTTCCCCCATCCAAGTGAGTTT
TGCACACGGAGGAAACATAGAAGTAAGTGAAGGAGGCACCAAGGGGCCGGTTCATTTGACTCCGGAACAAGCCAGGATGC
TTGATATCAAAGTTGTCCAGGCAACCCATCGTCCTATGGCACAATTGCTGGGTTTAAATGGTCAAATTCAATTATTACCT
GATGCTCAAGCTGATGTCAGCATTCGTATTAGTGGCAGTGTGACAGCGATTGATGTGAATTTGGGGGACAGTGTCAAGAC
AGGACAGCGCTTGGCTACAGTGCAATCACGATTGGTGGGAAATCCTCCACCGAGCGTTGCTGTCAATGCCCCAATTGCTG
GTATCATTGATGCAAGGAACATCAATTTAGGTCAGGCTGTCGAGCCAAACACCGTTCTTTTTCATATCAGTAATCGCGAT
AAATTATTAGTCATAGCTCAAGTGTATGAAGAAGATTTAGGTAAAGTGAAGGTAGGGCAAGAAGTGAATGTTCATGTCTT
AAGTTATCCCAAACAGACATTCCCGGGGCAAGTCACTTTAATTGAACCCAATCTTGATCCATTGACCCGTACAGTTAATG
TACGAATTACTTTGGATAACAAGGAGGGGCTACTGAAACCCGGAATGTTTGTGCGGGCTAATGTGATTTTAAGTCATAAT
AAGGCAGCACTCGTTGTGCCGAATGCCGCTCTTTTACAAGCAGATAACGAGCAATTTGTTTTTGTGCAAAATGGAGGCAC
TTACAAACGAGTCGATGTTAAAGTAGGCGCTGTGGAGGATGACTACTCAGAAATTATTGATGGTCTAGTTCCTGGCGATC
TCGTTGTTACTCAGGGAAATCGCGAGCTTTATACACTTTGGTTGAGTGGAGGCCGCAAACTGCAATCAGGGCAAGAGGAG
CATCATTAA

Upstream 100 bases:

>100_bases
AATTTTTACAAGTCTATGTGGCCTTGTGTACAGCTATTGGTCCTGGAAAAACAGATGGGTTTTGCTCTTATTTAGAGTAT
CAAAGCAACGGTGATAGCAA

Downstream 100 bases:

>100_bases
ATGTTTACTCGCCTTATTGCCTGGTCTTTGCATAATCGTCTCTTGATTTTGGCATTAACGATTATTCTTTGTTTGCTGGG
TGGTTATACTCTAAAGCAAA

Product: chemiosmotic efflux system protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MRLQLKIRMMIMTVFFLGLLSPIQVSFAHGGNIEVSEGGTKGPVHLTPEQARMLDIKVVQATHRPMAQLLGLNGQIQLLP
DAQADVSIRISGSVTAIDVNLGDSVKTGQRLATVQSRLVGNPPPSVAVNAPIAGIIDARNINLGQAVEPNTVLFHISNRD
KLLVIAQVYEEDLGKVKVGQEVNVHVLSYPKQTFPGQVTLIEPNLDPLTRTVNVRITLDNKEGLLKPGMFVRANVILSHN
KAALVVPNAALLQADNEQFVFVQNGGTYKRVDVKVGAVEDDYSEIIDGLVPGDLVVTQGNRELYTLWLSGGRKLQSGQEE
HH

Sequences:

>Translated_322_residues
MRLQLKIRMMIMTVFFLGLLSPIQVSFAHGGNIEVSEGGTKGPVHLTPEQARMLDIKVVQATHRPMAQLLGLNGQIQLLP
DAQADVSIRISGSVTAIDVNLGDSVKTGQRLATVQSRLVGNPPPSVAVNAPIAGIIDARNINLGQAVEPNTVLFHISNRD
KLLVIAQVYEEDLGKVKVGQEVNVHVLSYPKQTFPGQVTLIEPNLDPLTRTVNVRITLDNKEGLLKPGMFVRANVILSHN
KAALVVPNAALLQADNEQFVFVQNGGTYKRVDVKVGAVEDDYSEIIDGLVPGDLVVTQGNRELYTLWLSGGRKLQSGQEE
HH
>Mature_322_residues
MRLQLKIRMMIMTVFFLGLLSPIQVSFAHGGNIEVSEGGTKGPVHLTPEQARMLDIKVVQATHRPMAQLLGLNGQIQLLP
DAQADVSIRISGSVTAIDVNLGDSVKTGQRLATVQSRLVGNPPPSVAVNAPIAGIIDARNINLGQAVEPNTVLFHISNRD
KLLVIAQVYEEDLGKVKVGQEVNVHVLSYPKQTFPGQVTLIEPNLDPLTRTVNVRITLDNKEGLLKPGMFVRANVILSHN
KAALVVPNAALLQADNEQFVFVQNGGTYKRVDVKVGAVEDDYSEIIDGLVPGDLVVTQGNRELYTLWLSGGRKLQSGQEE
HH

Specific function: Involved in the production of Medicago-specific nodulation signal molecule [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1786787, Length=176, Percent_Identity=29.5454545454545, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 34969; Mature: 34969

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLQLKIRMMIMTVFFLGLLSPIQVSFAHGGNIEVSEGGTKGPVHLTPEQARMLDIKVVQ
CEEEEEHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCEEECCCHHEEEEEEEEE
ATHRPMAQLLGLNGQIQLLPDAQADVSIRISGSVTAIDVNLGDSVKTGQRLATVQSRLVG
CCCCCHHHHHCCCCEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHCC
NPPPSVAVNAPIAGIIDARNINLGQAVEPNTVLFHISNRDKLLVIAQVYEEDLGKVKVGQ
CCCCCEEECCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEHHHHCCCCEEECC
EVNVHVLSYPKQTFPGQVTLIEPNLDPLTRTVNVRITLDNKEGLLKPGMFVRANVILSHN
EEEEEEEECCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEECC
KAALVVPNAALLQADNEQFVFVQNGGTYKRVDVKVGAVEDDYSEIIDGLVPGDLVVTQGN
CEEEEECCHHEEECCCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHCCCCCCEEEECCC
RELYTLWLSGGRKLQSGQEEHH
CEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRLQLKIRMMIMTVFFLGLLSPIQVSFAHGGNIEVSEGGTKGPVHLTPEQARMLDIKVVQ
CEEEEEHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCEEECCCHHEEEEEEEEE
ATHRPMAQLLGLNGQIQLLPDAQADVSIRISGSVTAIDVNLGDSVKTGQRLATVQSRLVG
CCCCCHHHHHCCCCEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHCC
NPPPSVAVNAPIAGIIDARNINLGQAVEPNTVLFHISNRDKLLVIAQVYEEDLGKVKVGQ
CCCCCEEECCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEHHHHCCCCEEECC
EVNVHVLSYPKQTFPGQVTLIEPNLDPLTRTVNVRITLDNKEGLLKPGMFVRANVILSHN
EEEEEEEECCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEECC
KAALVVPNAALLQADNEQFVFVQNGGTYKRVDVKVGAVEDDYSEIIDGLVPGDLVVTQGN
CEEEEECCHHEEECCCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHCCCCCCEEEECCC
RELYTLWLSGGRKLQSGQEEHH
CEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1909418; 11481432 [H]