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The map label for this gene is oruR

Identifier: 52842237

GI number: 52842237

Start: 2259750

End: 2260763

Strand: Reverse

Name: oruR

Synonym: lpg2020

Alternate gene names: 52842237

Gene position: 2260763-2259750 (Counterclockwise)

Preceding gene: 52842238

Following gene: 52842236

Centisome position: 66.54

GC content: 34.12

Gene sequence:

>1014_bases
CTGTTGATGGATCTGGTTATAGCGGCAAATTATCTTTCTACTCTGGAAAAATGTCTTGAACAATTTGGGATTAACCATTT
TTTAGAAAAAATTGGCTTTGATCTGATAAGAGTACATGATCCTGATGCCTACTTAACTCAGGATGAATTTAACCAGGTTA
TTTTGGAAGCTTATAAATTAAGCAATTGTCCGGAATTGGGTTTGGTTTTTGGTCAAAACTTATCTATAGTCAATCACGGT
TTTCTTGGGTATGCAGCAATGAGCAGTCCTACATTTGGAACTGCTATACAAACTGTGCTCAGTTACCTTAATACACGAAC
CAATTTGTTGTCTCTGGAGTTACGCCAGTTTAATACTGAAAACAGTGCTTATATCAAGTTATTACCACACACAAAAGAAA
TGGTTTTATCACGTTTTATAACTGAATTGGCAATTACTCATCTTATTAAAATGAGAAATTTTTTGATTAGTTGTAATGAC
CCATTGCTCAAGATTGAGTTAAATTACGATGAACCTCCTTATGCAAAATATTATCAAACAATTTTTCAGACTAAAATTAT
TTTTAATACAGAGGCTACTCGCGTTTGGTTTAAAGCGGAGGAACTGAATTATCCCATCCATTTTGCTGACGATGTCAGTT
ATCAACTGGCAAAAAGGCAATTGCAAGAACTTGAAAAAAAAATGTCATTAAAAGAGGATATGGCAAGCAAGATTAAATCT
ATTTTAATCAATCAGAATTTAAATCACGTCAGCATGGATGAGATAGCCAGTCGATTATGTATGACTTCTCGTACTCTAAG
ACGTCATTTGCAGAGATTGGATGTGACTTACCAAGAGTTGCTTGATGAGGTAAGAGAACAAAAAGCAAAGACATTTTTGC
TCAATAATAATATTTCCATGACCGAGATCTGTTTTTTATTGGGTTTTCAAGATACATCCAATTTTTCAAAAGCATTCAAA
CGATGGACAGGAATCACTCCCACAGAATATAGGGAAAAACATGAAGTCCAATGA

Upstream 100 bases:

>100_bases
TTTAGTCAAGATAACTAAATCTTGAATTTTTATACATTATTGGATCTTATACTCTAATATAGATTAGAATTAATTCACTT
ATCACTTAAAAAAGAAAAGC

Downstream 100 bases:

>100_bases
TTGCTCGATTTTAATTTAATCTCATGGCTTATTGATTCTTGAGTTGATATTTATTCTCCTGCATACTGAGGTGGTTTTAT
TTTTAAAAATTGGTCAAGGC

Product: transcriptional regulator OruR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MLMDLVIAANYLSTLEKCLEQFGINHFLEKIGFDLIRVHDPDAYLTQDEFNQVILEAYKLSNCPELGLVFGQNLSIVNHG
FLGYAAMSSPTFGTAIQTVLSYLNTRTNLLSLELRQFNTENSAYIKLLPHTKEMVLSRFITELAITHLIKMRNFLISCND
PLLKIELNYDEPPYAKYYQTIFQTKIIFNTEATRVWFKAEELNYPIHFADDVSYQLAKRQLQELEKKMSLKEDMASKIKS
ILINQNLNHVSMDEIASRLCMTSRTLRRHLQRLDVTYQELLDEVREQKAKTFLLNNNISMTEICFLLGFQDTSNFSKAFK
RWTGITPTEYREKHEVQ

Sequences:

>Translated_337_residues
MLMDLVIAANYLSTLEKCLEQFGINHFLEKIGFDLIRVHDPDAYLTQDEFNQVILEAYKLSNCPELGLVFGQNLSIVNHG
FLGYAAMSSPTFGTAIQTVLSYLNTRTNLLSLELRQFNTENSAYIKLLPHTKEMVLSRFITELAITHLIKMRNFLISCND
PLLKIELNYDEPPYAKYYQTIFQTKIIFNTEATRVWFKAEELNYPIHFADDVSYQLAKRQLQELEKKMSLKEDMASKIKS
ILINQNLNHVSMDEIASRLCMTSRTLRRHLQRLDVTYQELLDEVREQKAKTFLLNNNISMTEICFLLGFQDTSNFSKAFK
RWTGITPTEYREKHEVQ
>Mature_337_residues
MLMDLVIAANYLSTLEKCLEQFGINHFLEKIGFDLIRVHDPDAYLTQDEFNQVILEAYKLSNCPELGLVFGQNLSIVNHG
FLGYAAMSSPTFGTAIQTVLSYLNTRTNLLSLELRQFNTENSAYIKLLPHTKEMVLSRFITELAITHLIKMRNFLISCND
PLLKIELNYDEPPYAKYYQTIFQTKIIFNTEATRVWFKAEELNYPIHFADDVSYQLAKRQLQELEKKMSLKEDMASKIKS
ILINQNLNHVSMDEIASRLCMTSRTLRRHLQRLDVTYQELLDEVREQKAKTFLLNNNISMTEICFLLGFQDTSNFSKAFK
RWTGITPTEYREKHEVQ

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39270; Mature: 39270

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMDLVIAANYLSTLEKCLEQFGINHFLEKIGFDLIRVHDPDAYLTQDEFNQVILEAYKL
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
SNCPELGLVFGQNLSIVNHGFLGYAAMSSPTFGTAIQTVLSYLNTRTNLLSLELRQFNTE
CCCCCHHHHCCCCCCEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
NSAYIKLLPHTKEMVLSRFITELAITHLIKMRNFLISCNDPLLKIELNYDEPPYAKYYQT
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCHHHHHHH
IFQTKIIFNTEATRVWFKAEELNYPIHFADDVSYQLAKRQLQELEKKMSLKEDMASKIKS
HHHHHHEEECCCCEEEEEHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILINQNLNHVSMDEIASRLCMTSRTLRRHLQRLDVTYQELLDEVREQKAKTFLLNNNISM
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCH
TEICFLLGFQDTSNFSKAFKRWTGITPTEYREKHEVQ
HHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHCCCC
>Mature Secondary Structure
MLMDLVIAANYLSTLEKCLEQFGINHFLEKIGFDLIRVHDPDAYLTQDEFNQVILEAYKL
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
SNCPELGLVFGQNLSIVNHGFLGYAAMSSPTFGTAIQTVLSYLNTRTNLLSLELRQFNTE
CCCCCHHHHCCCCCCEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
NSAYIKLLPHTKEMVLSRFITELAITHLIKMRNFLISCNDPLLKIELNYDEPPYAKYYQT
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCHHHHHHH
IFQTKIIFNTEATRVWFKAEELNYPIHFADDVSYQLAKRQLQELEKKMSLKEDMASKIKS
HHHHHHEEECCCCEEEEEHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILINQNLNHVSMDEIASRLCMTSRTLRRHLQRLDVTYQELLDEVREQKAKTFLLNNNISM
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCH
TEICFLLGFQDTSNFSKAFKRWTGITPTEYREKHEVQ
HHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]