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The map label for this gene is 52842063

Identifier: 52842063

GI number: 52842063

Start: 2056349

End: 2057767

Strand: Direct

Name: 52842063

Synonym: lpg1836

Alternate gene names: NA

Gene position: 2056349-2057767 (Clockwise)

Preceding gene: 52842062

Following gene: 52842070

Centisome position: 60.52

GC content: 39.25

Gene sequence:

>1419_bases
ATGGCTTTTTATAATTCTATCCCTTTAATTGGTAAACATTTAAAATCAGAGAGCCGTGCAAAAAAATACACTTCTGAAGA
ATTTAAAAGGCTAGAGAGAGAATACAGAGATCATATCGGTTTGCCAGAAAACTCAAGCTTTAGTTCTGACGCATTCGATA
AGCTTGTCAGCTCCAGAGTAGATGATTTCCGGGCTTTTCCGAAAACCAACTTACCCGGGGGATTGCTGTTTCATGATAAA
CTGAAGGAAGCCAATACTACCGAAGGGGATAATATCCGGGATGTCTTAAGTAAAACAGTCCTGGCACCAACTGAAAAATT
TAAAACAGCACAAAAAAATTTTACAGAATCAACTTCAACATTTAAAGAGCTAACCAAATTAATTCCAAGCAAATTCCGAG
CCCAGGATCTTGTTGGCACCATGAAGGAACTGACTGATGATGCTCGTAAAGCCATAATAGAACAGCAAGCGCATGAAATC
CAAATGTTGAAAGAAAAATTGGATCCCCAGAAAGAAGGACAAGCTGGTAATTACGTATCCGATTTTAAAAAAGCACTGGG
TCTTAAGGATAATGACGAAGTTAAGAAAGTTACAGAAGGCTTGATTAAGGAATTGGAAGAAACCCATAAAAAACAACTGG
GTGAATTCGATAAATCCACAAGCGACTCGTTAAACCAACTACATAAAGCCTCTGCGAGTGAATCATCAGAGTATCTGTTT
CTTGCCAATCTGTATGAAAACAATAAGGAAATGCGTCAAACGCTTGAAAAGTTATATGCCAAAGAACGCCAAAGAAAAGG
GCTTCCTCCTGAATCTACAACAGTTCAAGTAGGTATATCAGAAAACAAAATTGATCTCAATGGAATCAAACTCAAAGATA
TTCCTGTCATTAAAAGTATTACAGGGAGAGAGATTCATCAACAACCGGATGGCAGTTTTGCAATCCAGATGCCGATGATA
AACCCATTCTACTATCAGGATCCAAGGCAAAATGTCAAAACAGACATGATGCTCATTGCTCAAGCTATAAAAGCTTCAGG
TTATGACTCTATTGAAATGAATTGTAATTTTCCAAATAGTGAAAAGGTAGCGATGGAAAGGGGCAGGCAAGCTTTTGCCG
CCTGTATTGAAGCGGGATTTCCTGTTGACAAGATCACCATTAATGTTAACGGCAAACCTATGAAGGCGGACGAATTGTTT
AAAGAACATCCGAAAACATATCAGGATATTATGTCAAGAGCCTCAAAAATCTCGAAAGATTACGAGGACATCAAAGCGCC
CAAAACATCAACTGCCCCAGTGAACACTGTAGTTGTCAAACAGGAAATCGCCGCATTACGCACCAAACAGCAGCAAGAAG
AACGAGCTCAAACACAACCTGTTGATGAACAACGACATGGCGTGACCCCCAATAATTGA

Upstream 100 bases:

>100_bases
GATGCAATACCAGCCTGGTAATTATTAATAAATTAGCTTAATTTTTACTTAATAAAAAACTGTTATACTTTATCTAGATA
ACCTTATTGAGGTATTTGAT

Downstream 100 bases:

>100_bases
CTTATAAGTTGAATTTGGATTAAACAATCCAAATTCAACAAATTCATTATCCTCCCCGAAATTTGCTCAAAAAATTTCAC
TACCTCAAACCATCAATTTC

Product: coiled coil domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MAFYNSIPLIGKHLKSESRAKKYTSEEFKRLEREYRDHIGLPENSSFSSDAFDKLVSSRVDDFRAFPKTNLPGGLLFHDK
LKEANTTEGDNIRDVLSKTVLAPTEKFKTAQKNFTESTSTFKELTKLIPSKFRAQDLVGTMKELTDDARKAIIEQQAHEI
QMLKEKLDPQKEGQAGNYVSDFKKALGLKDNDEVKKVTEGLIKELEETHKKQLGEFDKSTSDSLNQLHKASASESSEYLF
LANLYENNKEMRQTLEKLYAKERQRKGLPPESTTVQVGISENKIDLNGIKLKDIPVIKSITGREIHQQPDGSFAIQMPMI
NPFYYQDPRQNVKTDMMLIAQAIKASGYDSIEMNCNFPNSEKVAMERGRQAFAACIEAGFPVDKITINVNGKPMKADELF
KEHPKTYQDIMSRASKISKDYEDIKAPKTSTAPVNTVVVKQEIAALRTKQQQEERAQTQPVDEQRHGVTPNN

Sequences:

>Translated_472_residues
MAFYNSIPLIGKHLKSESRAKKYTSEEFKRLEREYRDHIGLPENSSFSSDAFDKLVSSRVDDFRAFPKTNLPGGLLFHDK
LKEANTTEGDNIRDVLSKTVLAPTEKFKTAQKNFTESTSTFKELTKLIPSKFRAQDLVGTMKELTDDARKAIIEQQAHEI
QMLKEKLDPQKEGQAGNYVSDFKKALGLKDNDEVKKVTEGLIKELEETHKKQLGEFDKSTSDSLNQLHKASASESSEYLF
LANLYENNKEMRQTLEKLYAKERQRKGLPPESTTVQVGISENKIDLNGIKLKDIPVIKSITGREIHQQPDGSFAIQMPMI
NPFYYQDPRQNVKTDMMLIAQAIKASGYDSIEMNCNFPNSEKVAMERGRQAFAACIEAGFPVDKITINVNGKPMKADELF
KEHPKTYQDIMSRASKISKDYEDIKAPKTSTAPVNTVVVKQEIAALRTKQQQEERAQTQPVDEQRHGVTPNN
>Mature_471_residues
AFYNSIPLIGKHLKSESRAKKYTSEEFKRLEREYRDHIGLPENSSFSSDAFDKLVSSRVDDFRAFPKTNLPGGLLFHDKL
KEANTTEGDNIRDVLSKTVLAPTEKFKTAQKNFTESTSTFKELTKLIPSKFRAQDLVGTMKELTDDARKAIIEQQAHEIQ
MLKEKLDPQKEGQAGNYVSDFKKALGLKDNDEVKKVTEGLIKELEETHKKQLGEFDKSTSDSLNQLHKASASESSEYLFL
ANLYENNKEMRQTLEKLYAKERQRKGLPPESTTVQVGISENKIDLNGIKLKDIPVIKSITGREIHQQPDGSFAIQMPMIN
PFYYQDPRQNVKTDMMLIAQAIKASGYDSIEMNCNFPNSEKVAMERGRQAFAACIEAGFPVDKITINVNGKPMKADELFK
EHPKTYQDIMSRASKISKDYEDIKAPKTSTAPVNTVVVKQEIAALRTKQQQEERAQTQPVDEQRHGVTPNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53507; Mature: 53376

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFYNSIPLIGKHLKSESRAKKYTSEEFKRLEREYRDHIGLPENSSFSSDAFDKLVSSRV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
DDFRAFPKTNLPGGLLFHDKLKEANTTEGDNIRDVLSKTVLAPTEKFKTAQKNFTESTST
HHHHCCCCCCCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FKELTKLIPSKFRAQDLVGTMKELTDDARKAIIEQQAHEIQMLKEKLDPQKEGQAGNYVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
DFKKALGLKDNDEVKKVTEGLIKELEETHKKQLGEFDKSTSDSLNQLHKASASESSEYLF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEE
LANLYENNKEMRQTLEKLYAKERQRKGLPPESTTVQVGISENKIDLNGIKLKDIPVIKSI
EHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCEEECCCCHHHHC
TGREIHQQPDGSFAIQMPMINPFYYQDPRQNVKTDMMLIAQAIKASGYDSIEMNCNFPNS
CCCHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
EKVAMERGRQAFAACIEAGFPVDKITINVNGKPMKADELFKEHPKTYQDIMSRASKISKD
HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH
YEDIKAPKTSTAPVNTVVVKQEIAALRTKQQQEERAQTQPVDEQRHGVTPNN
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC
>Mature Secondary Structure 
AFYNSIPLIGKHLKSESRAKKYTSEEFKRLEREYRDHIGLPENSSFSSDAFDKLVSSRV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
DDFRAFPKTNLPGGLLFHDKLKEANTTEGDNIRDVLSKTVLAPTEKFKTAQKNFTESTST
HHHHCCCCCCCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FKELTKLIPSKFRAQDLVGTMKELTDDARKAIIEQQAHEIQMLKEKLDPQKEGQAGNYVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
DFKKALGLKDNDEVKKVTEGLIKELEETHKKQLGEFDKSTSDSLNQLHKASASESSEYLF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEE
LANLYENNKEMRQTLEKLYAKERQRKGLPPESTTVQVGISENKIDLNGIKLKDIPVIKSI
EHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCEEECCCCHHHHC
TGREIHQQPDGSFAIQMPMINPFYYQDPRQNVKTDMMLIAQAIKASGYDSIEMNCNFPNS
CCCHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
EKVAMERGRQAFAACIEAGFPVDKITINVNGKPMKADELFKEHPKTYQDIMSRASKISKD
HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH
YEDIKAPKTSTAPVNTVVVKQEIAALRTKQQQEERAQTQPVDEQRHGVTPNN
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA