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The map label for this gene is metQ [H]

Identifier: 52842062

GI number: 52842062

Start: 2055478

End: 2056269

Strand: Direct

Name: metQ [H]

Synonym: lpg1835

Alternate gene names: 52842062

Gene position: 2055478-2056269 (Clockwise)

Preceding gene: 52842061

Following gene: 52842063

Centisome position: 60.5

GC content: 38.76

Gene sequence:

>792_bases
TTGGGAGGTTCAATGAGAATTTTAAGTTGTTTGGTTTTAATCATTAGCCTGGTAGCTTGCAGTAGTAAGCCAGCTCCCAA
TACCTTGGTCATCGGCACAATTGCTGGCCCTGAAACAGAACTTATTGAAACAGCAAAACAAGTTGCTGAAAAAGAGTATG
GGCTCAACATAAAAATTGTTGAATTTAATGATTATAATTTGCCCAATGAAGCACTGCAAGATGGCAGTCTAGATGCTAAT
GTTTACCAACATTTACCTTATTTAAAAGCTGCTATACTGTCCCATGGTTATGATTTGCAGGCAATCGGCAGAACCTTCGT
TTATCCAATGGGTATTTATTCGAAGAAATATAAAACACTCAGTGAATTACCTGAGAATGGAATAATTGCAGTCCCTAATG
ACCCTAGTAATGAGATGCGCGCCTTCTTGTTATTGGAGAAAGCTCATTTAATTACTCTTAAAAATACAACGAATAGCGGT
ATTCAAGATATCGAAAGTAACCCCAAACAATTCAAATTCAAAGAGATAGACGCCGCTCAATTACCAAGAGTGCTCCCTGA
TGTTGATGCCGCAGTAATTAACACGACGTTTGCCTTGCCTGCCGGATTAAGCCCATCAAAAGATGCTTTATTTACTGAAG
GCAAAGATTCACCTTATGCCAATATCATTGTGATACGCCGTGACACTGAAAAAAGGCCACAGCTTGAATTGTTTGTGAAG
GCGTTGAATTCAGAAGAAGTAAAAGAGAAAGCAAAAAAACTGTTTGGAGAAGATGCAATACCAGCCTGGTAA

Upstream 100 bases:

>100_bases
TGCTGGCATTATGATAGCTACTGTGATTGTATTAATTATTTTGGTCCAACTGATACAAATGGTTGGAGACTACTTGGCCA
AACGTTGTACACATTATTAA

Downstream 100 bases:

>100_bases
TTATTAATAAATTAGCTTAATTTTTACTTAATAAAAAACTGTTATACTTTATCTAGATAACCTTATTGAGGTATTTGATA
TGGCTTTTTATAATTCTATC

Product: 29 kDa immunogenic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MGGSMRILSCLVLIISLVACSSKPAPNTLVIGTIAGPETELIETAKQVAEKEYGLNIKIVEFNDYNLPNEALQDGSLDAN
VYQHLPYLKAAILSHGYDLQAIGRTFVYPMGIYSKKYKTLSELPENGIIAVPNDPSNEMRAFLLLEKAHLITLKNTTNSG
IQDIESNPKQFKFKEIDAAQLPRVLPDVDAAVINTTFALPAGLSPSKDALFTEGKDSPYANIIVIRRDTEKRPQLELFVK
ALNSEEVKEKAKKLFGEDAIPAW

Sequences:

>Translated_263_residues
MGGSMRILSCLVLIISLVACSSKPAPNTLVIGTIAGPETELIETAKQVAEKEYGLNIKIVEFNDYNLPNEALQDGSLDAN
VYQHLPYLKAAILSHGYDLQAIGRTFVYPMGIYSKKYKTLSELPENGIIAVPNDPSNEMRAFLLLEKAHLITLKNTTNSG
IQDIESNPKQFKFKEIDAAQLPRVLPDVDAAVINTTFALPAGLSPSKDALFTEGKDSPYANIIVIRRDTEKRPQLELFVK
ALNSEEVKEKAKKLFGEDAIPAW
>Mature_262_residues
GGSMRILSCLVLIISLVACSSKPAPNTLVIGTIAGPETELIETAKQVAEKEYGLNIKIVEFNDYNLPNEALQDGSLDANV
YQHLPYLKAAILSHGYDLQAIGRTFVYPMGIYSKKYKTLSELPENGIIAVPNDPSNEMRAFLLLEKAHLITLKNTTNSGI
QDIESNPKQFKFKEIDAAQLPRVLPDVDAAVINTTFALPAGLSPSKDALFTEGKDSPYANIIVIRRDTEKRPQLELFVKA
LNSEEVKEKAKKLFGEDAIPAW

Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=261, Percent_Identity=45.5938697318008, Blast_Score=231, Evalue=3e-62,
Organism=Escherichia coli, GI1790093, Length=237, Percent_Identity=45.1476793248945, Blast_Score=214, Evalue=6e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 28947; Mature: 28815

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGSMRILSCLVLIISLVACSSKPAPNTLVIGTIAGPETELIETAKQVAEKEYGLNIKIV
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEE
EFNDYNLPNEALQDGSLDANVYQHLPYLKAAILSHGYDLQAIGRTFVYPMGIYSKKYKTL
EECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCHHHHHHHHH
SELPENGIIAVPNDPSNEMRAFLLLEKAHLITLKNTTNSGIQDIESNPKQFKFKEIDAAQ
HHCCCCCEEECCCCCHHHHHHHHEEEEEEEEEEECCCCCCHHHHHCCCCCEEEEECCHHH
LPRVLPDVDAAVINTTFALPAGLSPSKDALFTEGKDSPYANIIVIRRDTEKRPQLELFVK
CCHHCCCCCHHHHHHHEECCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHH
ALNSEEVKEKAKKLFGEDAIPAW
HHCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GGSMRILSCLVLIISLVACSSKPAPNTLVIGTIAGPETELIETAKQVAEKEYGLNIKIV
CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEE
EFNDYNLPNEALQDGSLDANVYQHLPYLKAAILSHGYDLQAIGRTFVYPMGIYSKKYKTL
EECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCHHHHHHHHH
SELPENGIIAVPNDPSNEMRAFLLLEKAHLITLKNTTNSGIQDIESNPKQFKFKEIDAAQ
HHCCCCCEEECCCCCHHHHHHHHEEEEEEEEEEECCCCCCHHHHHCCCCCEEEEECCHHH
LPRVLPDVDAAVINTTFALPAGLSPSKDALFTEGKDSPYANIIVIRRDTEKRPQLELFVK
CCHHCCCCCHHHHHHHEECCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHH
ALNSEEVKEKAKKLFGEDAIPAW
HHCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]