| Definition | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome. |
|---|---|
| Accession | NC_002942 |
| Length | 3,397,754 |
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The map label for this gene is ytfN [H]
Identifier: 52842034
GI number: 52842034
Start: 2018348
End: 2020888
Strand: Direct
Name: ytfN [H]
Synonym: lpg1807
Alternate gene names: 52842034
Gene position: 2018348-2020888 (Clockwise)
Preceding gene: 52842033
Following gene: 52842035
Centisome position: 59.4
GC content: 35.18
Gene sequence:
>2541_bases ATGATGATATTAAAATTTATAAAAAAAGGATTTTACTACTGCTTAATAACAGCAATATGTCTGGTTAGTTTGATTATCTT TTTGATTTCAACTACCCCGGGGCTATATGCAGTAATTAAATTAACTCATTTATATCTTCCTGGCACTCTTAAAATACACC ATCTTAAAGGACAATTACTTGACCAATTTTCTATTGGTGAAATGGAATATCAACATCAAGACACTAAAATAAAAATTTTT AACCTGGCGGTTAACTGGCGTTTCAGCTCATTGCTTCGCAAAAAATTGCCTATTGATAGCATGAGTGCTGAAAAGATTGA AATAAATCAAAAGACGCCCATACTGATACTAAAAAATATCAAATTAAGCGGTTATTTAAATCAACAATTAATTAAACTGA ATACACTGCAATTTAATTATTGGAATCAATTGATTACCAGCCAATTAGAAGTTAGCAACTCATTTCCTCATGCATTTTCA GGAAAAATTCGTTTAAACCCACATTCTACAAATAAGAATATATTCTCAGGAGGGGTAGACATTGGCGGTAATCGGAATCA AACTCAATGGGGAGGAGAATTTGAAGGTCCTGGAAAAATAACAATTAACGGCAGTCTTCAACAGTTAAAACAAATAAAAC AAATCATAAAATGGCGTGACTTACATTGGCAAGACAATAAAAATCACAATTTAAAAAGCTCGCAAGGAAGAATTGAGGTA TCGGGAACAATTCCAAATTTAGCTATCGACTTAAAATCCAAACTTGGCATAGATCAATTAAAAAATTGGCAAATGAACGC TTCGATTAAGGGCAAGCTGCCTTGGCAATGGAGTGTCAATGCTACGTTCTCTCAACCATTAGATTTCTCATCAAAACTTG ATGGTTTATATACAAAATTTGCTTTGAAAATGGAAACTCAAAGTGACCATCATGCCAACTTTCTGATCACGATTGCTCCA GGCCATTATCAAATGACAGAAAACAATCTGATGCCGTTAATTCAGTTTACTGGCGGCAATATTAAAGGCTCTCTTTCCCC AAAACAATTCAGTGGACAAGGAGTTCTCTTTCTAGATGCATATAAAAAAGTCAATTTCAATTTTAAATTCCCGGAGTTTA ATGTCTACCAAGATATAGCGCAGCAAACAATCGATGCGAAACTATCCATTCTTTTTAACTCCCTGGATTTTTTGCAAAAT GTCAGTCCTTATTTCATGAATCCCAAAGGACAACTTCTTGCCTCCATTCATGCAAAGGGAACTTTAAATAAACCAAGAAT TGAAAGTAAACTCACTTTAAACAAAGGCTCAGTGAACATCCCTACTTTAGGCCTCAATATAACTGATATGGGATTAGCTG TTTTTAGCAAAAAAGATGGATGGGAAGCAACTGGCTCCATTCATTCATCTGAAAAAAAACTAACCCTAAAAGGACAAGGT AGTTTCAATAAGGAACTTGGTGGAACTGTTTCAATAGAAGGTTCTAATTTTCCGGTTGCAAACACTAAGGAATTTCAGGT TAATATATCTCCACAGTTAAATGTGCGCTTTACTCCATCACTATGTCAAATCACTGGAACCATCCAAATTCCTAATGCCC ATATAAAACCACAAACGTTTACCAATAGTCTTGTGGCTACAGATGATATTGTATTTACGAGTAAGAATACTCAACCGATT ACCCCACTCTTTAATACCAACATGTCGGTACGAGTTGAAATGGGAGAAGAAGTTGAACTGACCTTTAAGGGATTGCATGC TTATTTGGCGGGTATAGTTACAATCAATCAATTATCGCAAGGACCCATAACGGCAAATGGTGAGTTAGCTGTCAAAAAAG GAGAATATAAAGCCTATGGCCAGGATTTATCTATTGAACAAGGACAATTAATTTTTACAGGCGGTAGAATTGATAACCCA GAAATTAATCTAAGAGCATCGAAGAATATATCCAATTCATTTGGTAGTGTATCAGGATCCTCTGAGCTGTTTAATTTTAA TAATTATAATAACCTCAATGTTGGCAACAATTTTAATGTTGGGGTCGAAGTAGCTGGACGATTACAATCGCCTAAAATTC AATTATTCTCTAACCCTCCAACACTTTCTCAAGCAGATATCCTATCTTTTCTTGTAATTGGCCGCCCAGCCAATCAAGCA GATAAGGCAAAAGGCCAATTACTTTTAACAGCTATTTCCTCGATGAACTTAGGAACAGGAACTAATGGAACCCAACTGCT GGAGCAATTAAAACAAAAATTAGGATTCGATTTTAACGTACAAACGACAACCAATTTTAATCAGCAAACCAATAAAATCA GTGAATCAACCGGCGTTGTGGTTGGAAAATCTCTTTCGGATCGAATTTATTTAAGTTATAACGTCGGTTTATCTCAAACC GATCCTAACGTATTAACCTTAAAATACATACTAAATAAATTTTTAAGCATTCAGGTAAGCAGCAGTGATTCAGGTAATGG CGTCGATGTCCTGTATACTAAAAGCTCGTCATCGCCGAAAAAAACAAAGCCTGACAAATAA
Upstream 100 bases:
>100_bases CTATTGGGCCAATTAAAGTTGGATTAGCCCAATCAGTCGATAATAAGATGGAGAGAATAGGACACAATCCAAGATTGGTT ATCAGTATGGGACCAGACTT
Downstream 100 bases:
>100_bases AACATTAATCCATATTGTCTAAGGATGTAATAAATGAATGAATATAATTTGCCTTTGAGGTTATCTCGTTTAAGAAAAAA TGCTATGTCGAGAGCATTAG
Product: periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 846; Mature: 846
Protein sequence:
>846_residues MMILKFIKKGFYYCLITAICLVSLIIFLISTTPGLYAVIKLTHLYLPGTLKIHHLKGQLLDQFSIGEMEYQHQDTKIKIF NLAVNWRFSSLLRKKLPIDSMSAEKIEINQKTPILILKNIKLSGYLNQQLIKLNTLQFNYWNQLITSQLEVSNSFPHAFS GKIRLNPHSTNKNIFSGGVDIGGNRNQTQWGGEFEGPGKITINGSLQQLKQIKQIIKWRDLHWQDNKNHNLKSSQGRIEV SGTIPNLAIDLKSKLGIDQLKNWQMNASIKGKLPWQWSVNATFSQPLDFSSKLDGLYTKFALKMETQSDHHANFLITIAP GHYQMTENNLMPLIQFTGGNIKGSLSPKQFSGQGVLFLDAYKKVNFNFKFPEFNVYQDIAQQTIDAKLSILFNSLDFLQN VSPYFMNPKGQLLASIHAKGTLNKPRIESKLTLNKGSVNIPTLGLNITDMGLAVFSKKDGWEATGSIHSSEKKLTLKGQG SFNKELGGTVSIEGSNFPVANTKEFQVNISPQLNVRFTPSLCQITGTIQIPNAHIKPQTFTNSLVATDDIVFTSKNTQPI TPLFNTNMSVRVEMGEEVELTFKGLHAYLAGIVTINQLSQGPITANGELAVKKGEYKAYGQDLSIEQGQLIFTGGRIDNP EINLRASKNISNSFGSVSGSSELFNFNNYNNLNVGNNFNVGVEVAGRLQSPKIQLFSNPPTLSQADILSFLVIGRPANQA DKAKGQLLLTAISSMNLGTGTNGTQLLEQLKQKLGFDFNVQTTTNFNQQTNKISESTGVVVGKSLSDRIYLSYNVGLSQT DPNVLTLKYILNKFLSIQVSSSDSGNGVDVLYTKSSSSPKKTKPDK
Sequences:
>Translated_846_residues MMILKFIKKGFYYCLITAICLVSLIIFLISTTPGLYAVIKLTHLYLPGTLKIHHLKGQLLDQFSIGEMEYQHQDTKIKIF NLAVNWRFSSLLRKKLPIDSMSAEKIEINQKTPILILKNIKLSGYLNQQLIKLNTLQFNYWNQLITSQLEVSNSFPHAFS GKIRLNPHSTNKNIFSGGVDIGGNRNQTQWGGEFEGPGKITINGSLQQLKQIKQIIKWRDLHWQDNKNHNLKSSQGRIEV SGTIPNLAIDLKSKLGIDQLKNWQMNASIKGKLPWQWSVNATFSQPLDFSSKLDGLYTKFALKMETQSDHHANFLITIAP GHYQMTENNLMPLIQFTGGNIKGSLSPKQFSGQGVLFLDAYKKVNFNFKFPEFNVYQDIAQQTIDAKLSILFNSLDFLQN VSPYFMNPKGQLLASIHAKGTLNKPRIESKLTLNKGSVNIPTLGLNITDMGLAVFSKKDGWEATGSIHSSEKKLTLKGQG SFNKELGGTVSIEGSNFPVANTKEFQVNISPQLNVRFTPSLCQITGTIQIPNAHIKPQTFTNSLVATDDIVFTSKNTQPI TPLFNTNMSVRVEMGEEVELTFKGLHAYLAGIVTINQLSQGPITANGELAVKKGEYKAYGQDLSIEQGQLIFTGGRIDNP EINLRASKNISNSFGSVSGSSELFNFNNYNNLNVGNNFNVGVEVAGRLQSPKIQLFSNPPTLSQADILSFLVIGRPANQA DKAKGQLLLTAISSMNLGTGTNGTQLLEQLKQKLGFDFNVQTTTNFNQQTNKISESTGVVVGKSLSDRIYLSYNVGLSQT DPNVLTLKYILNKFLSIQVSSSDSGNGVDVLYTKSSSSPKKTKPDK >Mature_846_residues MMILKFIKKGFYYCLITAICLVSLIIFLISTTPGLYAVIKLTHLYLPGTLKIHHLKGQLLDQFSIGEMEYQHQDTKIKIF NLAVNWRFSSLLRKKLPIDSMSAEKIEINQKTPILILKNIKLSGYLNQQLIKLNTLQFNYWNQLITSQLEVSNSFPHAFS GKIRLNPHSTNKNIFSGGVDIGGNRNQTQWGGEFEGPGKITINGSLQQLKQIKQIIKWRDLHWQDNKNHNLKSSQGRIEV SGTIPNLAIDLKSKLGIDQLKNWQMNASIKGKLPWQWSVNATFSQPLDFSSKLDGLYTKFALKMETQSDHHANFLITIAP GHYQMTENNLMPLIQFTGGNIKGSLSPKQFSGQGVLFLDAYKKVNFNFKFPEFNVYQDIAQQTIDAKLSILFNSLDFLQN VSPYFMNPKGQLLASIHAKGTLNKPRIESKLTLNKGSVNIPTLGLNITDMGLAVFSKKDGWEATGSIHSSEKKLTLKGQG SFNKELGGTVSIEGSNFPVANTKEFQVNISPQLNVRFTPSLCQITGTIQIPNAHIKPQTFTNSLVATDDIVFTSKNTQPI TPLFNTNMSVRVEMGEEVELTFKGLHAYLAGIVTINQLSQGPITANGELAVKKGEYKAYGQDLSIEQGQLIFTGGRIDNP EINLRASKNISNSFGSVSGSSELFNFNNYNNLNVGNNFNVGVEVAGRLQSPKIQLFSNPPTLSQADILSFLVIGRPANQA DKAKGQLLLTAISSMNLGTGTNGTQLLEQLKQKLGFDFNVQTTTNFNQQTNKISESTGVVVGKSLSDRIYLSYNVGLSQT DPNVLTLKYILNKFLSIQVSSSDSGNGVDVLYTKSSSSPKKTKPDK
Specific function: Unknown
COG id: COG2911
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0696 [H]
Homologues:
Organism=Escherichia coli, GI1790667, Length=380, Percent_Identity=27.6315789473684, Blast_Score=109, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007452 [H]
Pfam domain/function: PF04357 DUF490 [H]
EC number: NA
Molecular weight: Translated: 93758; Mature: 93758
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMILKFIKKGFYYCLITAICLVSLIIFLISTTPGLYAVIKLTHLYLPGTLKIHHLKGQLL CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEEECCHHH DQFSIGEMEYQHQDTKIKIFNLAVNWRFSSLLRKKLPIDSMSAEKIEINQKTPILILKNI CCCCCCCEEEECCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEE KLSGYLNQQLIKLNTLQFNYWNQLITSQLEVSNSFPHAFSGKIRLNPHSTNKNIFSGGVD EEECCCCCEEEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEECCEE IGGNRNQTQWGGEFEGPGKITINGSLQQLKQIKQIIKWRDLHWQDNKNHNLKSSQGRIEV CCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE SGTIPNLAIDLKSKLGIDQLKNWQMNASIKGKLPWQWSVNATFSQPLDFSSKLDGLYTKF ECCCCCEEEEEHHHCCHHHHCCEEECCEEECCCCEEEEECCCCCCCCCCHHHHCCEEEEE ALKMETQSDHHANFLITIAPGHYQMTENNLMPLIQFTGGNIKGSLSPKQFSGQGVLFLDA EEEEECCCCCCCEEEEEECCCCEEECCCCCEEEEEEECCCEEECCCCCCCCCCEEEEEEE YKKVNFNFKFPEFNVYQDIAQQTIDAKLSILFNSLDFLQNVSPYFMNPKGQLLASIHAKG EEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCC TLNKPRIESKLTLNKGSVNIPTLGLNITDMGLAVFSKKDGWEATGSIHSSEKKLTLKGQG CCCCCCCCCEEEECCCCEECCEEECEEECCCEEEEECCCCCCCCCCEECCCCEEEEECCC SFNKELGGTVSIEGSNFPVANTKEFQVNISPQLNVRFTPSLCQITGTIQIPNAHIKPQTF CCCCCCCCEEEECCCCCCCCCCEEEEEEECCEEEEEECCCEEEEEEEEECCCCCCCCCCC TNSLVATDDIVFTSKNTQPITPLFNTNMSVRVEMGEEVELTFKGLHAYLAGIVTINQLSQ CCCEEEECEEEEECCCCCCCCCEECCCEEEEEECCCEEEEEHHHHHHHHHHHHEEECCCC GPITANGELAVKKGEYKAYGQDLSIEQGQLIFTGGRIDNPEINLRASKNISNSFGSVSGS CCCCCCCCEEEECCCCEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCC SELFNFNNYNNLNVGNNFNVGVEVAGRLQSPKIQLFSNPPTLSQADILSFLVIGRPANQA CCEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHEEEEECCCCCCC DKAKGQLLLTAISSMNLGTGTNGTQLLEQLKQKLGFDFNVQTTTNFNQQTNKISESTGVV HHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCEE VGKSLSDRIYLSYNVGLSQTDPNVLTLKYILNKFLSIQVSSSDSGNGVDVLYTKSSSSPK EECCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCC KTKPDK CCCCCC >Mature Secondary Structure MMILKFIKKGFYYCLITAICLVSLIIFLISTTPGLYAVIKLTHLYLPGTLKIHHLKGQLL CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEEECCHHH DQFSIGEMEYQHQDTKIKIFNLAVNWRFSSLLRKKLPIDSMSAEKIEINQKTPILILKNI CCCCCCCEEEECCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEE KLSGYLNQQLIKLNTLQFNYWNQLITSQLEVSNSFPHAFSGKIRLNPHSTNKNIFSGGVD EEECCCCCEEEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEECCEE IGGNRNQTQWGGEFEGPGKITINGSLQQLKQIKQIIKWRDLHWQDNKNHNLKSSQGRIEV CCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE SGTIPNLAIDLKSKLGIDQLKNWQMNASIKGKLPWQWSVNATFSQPLDFSSKLDGLYTKF ECCCCCEEEEEHHHCCHHHHCCEEECCEEECCCCEEEEECCCCCCCCCCHHHHCCEEEEE ALKMETQSDHHANFLITIAPGHYQMTENNLMPLIQFTGGNIKGSLSPKQFSGQGVLFLDA EEEEECCCCCCCEEEEEECCCCEEECCCCCEEEEEEECCCEEECCCCCCCCCCEEEEEEE YKKVNFNFKFPEFNVYQDIAQQTIDAKLSILFNSLDFLQNVSPYFMNPKGQLLASIHAKG EEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCC TLNKPRIESKLTLNKGSVNIPTLGLNITDMGLAVFSKKDGWEATGSIHSSEKKLTLKGQG CCCCCCCCCEEEECCCCEECCEEECEEECCCEEEEECCCCCCCCCCEECCCCEEEEECCC SFNKELGGTVSIEGSNFPVANTKEFQVNISPQLNVRFTPSLCQITGTIQIPNAHIKPQTF CCCCCCCCEEEECCCCCCCCCCEEEEEEECCEEEEEECCCEEEEEEEEECCCCCCCCCCC TNSLVATDDIVFTSKNTQPITPLFNTNMSVRVEMGEEVELTFKGLHAYLAGIVTINQLSQ CCCEEEECEEEEECCCCCCCCCEECCCEEEEEECCCEEEEEHHHHHHHHHHHHEEECCCC GPITANGELAVKKGEYKAYGQDLSIEQGQLIFTGGRIDNPEINLRASKNISNSFGSVSGS CCCCCCCCEEEECCCCEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCC SELFNFNNYNNLNVGNNFNVGVEVAGRLQSPKIQLFSNPPTLSQADILSFLVIGRPANQA CCEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHEEEEECCCCCCC DKAKGQLLLTAISSMNLGTGTNGTQLLEQLKQKLGFDFNVQTTTNFNQQTNKISESTGVV HHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCEE VGKSLSDRIYLSYNVGLSQTDPNVLTLKYILNKFLSIQVSSSDSGNGVDVLYTKSSSSPK EECCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCC KTKPDK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]