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The map label for this gene is fliP

Identifier: 52842016

GI number: 52842016

Start: 1996806

End: 1997555

Strand: Reverse

Name: fliP

Synonym: lpg1789

Alternate gene names: 52842016

Gene position: 1997555-1996806 (Counterclockwise)

Preceding gene: 52842017

Following gene: 52842015

Centisome position: 58.79

GC content: 34.53

Gene sequence:

>750_bases
ATGAAAATTAAAAGTTGGTTACTGATTTTGATATTATTTCTTTTATTACCTGTTGCAGGTCACACAGACCCTTTATCCTT
TCCCGTTGTTACAATGCAACCTGGAACTGATGGTTCGCAATCTTATAGTATCAATCTGCAAATTTTAATTTTTATGACTT
TATTGACCGTATTGCCAGGATTGCTGATGGCAATGACGTCATTTACAAGGATAATTATTGTTCTGTCAATTTTACGGCAG
GCAATAGGGATGGCTCAGACGCCTACCAATCAAATATTAATCGGCATTGCTCTATTTATGACTTATTTTGTTATGTCACC
TGTATTCAACAAAATTAATGAAACAGCAATACAGCCCTATATGAATGAAAGGATTGATTTTTCTCTGGCATTATCCAATG
CACAAAAGCCGCTTCGTCAGTTTATGCTAAATCAAACGAGAAAAAATGATTTATCTTTATTTGAAAAATTTGCTCACAAT
GTACCAAAAAGTTTAGATGAGATTCCTATGAGTGTTCTCATTCCGGCTTTCATTACTAGCGAGTTAAAAACCGCATTTCA
GATAGGCTTTATTCTATTTTTACCTTTTTTAATTATTGATCTTGTTGTGTCCAGTGTTTTGATGGCTATGGGGATGATGA
TGCTTTCACCCTTGATTATTTCATTACCTTTTAAAATCATGTTGTTTGTGATGGTTGATGGATGGACTTTGGTTTTGGGT
TCACTTGCTTCAAGTTTTGCTCTTGCCTAG

Upstream 100 bases:

>100_bases
TCTAATATGTGATTTTGGCAATCAACTTCCTGAAGGGTTTGATGCTGATCAAAAATCGTCTTTTGCCGATGTGCTGAAAT
CAGCAATAGGAAAATCATAA

Downstream 100 bases:

>100_bases
GAGGCTATATGACCCCTGAATCAGTCGTTTCGTTGTTTAGTGATAGTGTTTATATCATTTTGCTATTACTGGCAGTGTTG
ATATTACCGGGATTAATTGT

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKIKSWLLILILFLLLPVAGHTDPLSFPVVTMQPGTDGSQSYSINLQILIFMTLLTVLPGLLMAMTSFTRIIIVLSILRQ
AIGMAQTPTNQILIGIALFMTYFVMSPVFNKINETAIQPYMNERIDFSLALSNAQKPLRQFMLNQTRKNDLSLFEKFAHN
VPKSLDEIPMSVLIPAFITSELKTAFQIGFILFLPFLIIDLVVSSVLMAMGMMMLSPLIISLPFKIMLFVMVDGWTLVLG
SLASSFALA

Sequences:

>Translated_249_residues
MKIKSWLLILILFLLLPVAGHTDPLSFPVVTMQPGTDGSQSYSINLQILIFMTLLTVLPGLLMAMTSFTRIIIVLSILRQ
AIGMAQTPTNQILIGIALFMTYFVMSPVFNKINETAIQPYMNERIDFSLALSNAQKPLRQFMLNQTRKNDLSLFEKFAHN
VPKSLDEIPMSVLIPAFITSELKTAFQIGFILFLPFLIIDLVVSSVLMAMGMMMLSPLIISLPFKIMLFVMVDGWTLVLG
SLASSFALA
>Mature_249_residues
MKIKSWLLILILFLLLPVAGHTDPLSFPVVTMQPGTDGSQSYSINLQILIFMTLLTVLPGLLMAMTSFTRIIIVLSILRQ
AIGMAQTPTNQILIGIALFMTYFVMSPVFNKINETAIQPYMNERIDFSLALSNAQKPLRQFMLNQTRKNDLSLFEKFAHN
VPKSLDEIPMSVLIPAFITSELKTAFQIGFILFLPFLIIDLVVSSVLMAMGMMMLSPLIISLPFKIMLFVMVDGWTLVLG
SLASSFALA

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=227, Percent_Identity=55.9471365638767, Blast_Score=257, Evalue=6e-70,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27755; Mature: 27755

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCC
>Mature Secondary Structure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HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]