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The map label for this gene is fliO

Identifier: 52842017

GI number: 52842017

Start: 1997556

End: 1997966

Strand: Reverse

Name: fliO

Synonym: lpg1790

Alternate gene names: NA

Gene position: 1997966-1997556 (Counterclockwise)

Preceding gene: 52842018

Following gene: 52842016

Centisome position: 58.8

GC content: 35.04

Gene sequence:

>411_bases
ATGAAAAGCAAAGTACTCCATCTTGCATTTTTGAGTCTTTCGCTAATCAGTTCGGTCGGTTGGTCATCTACTTTAAGCCC
AAACACGATCAGCTATGGCGAACTGATAAGAATCATTTCGGGACTCTTATTTGTATTATTCATTATTATTTTTTTATCTT
GGATAGTGAAGCGTATGCATAGAGTAAACTTTACTTCATCTAAAGGATTCCAAACTGTTGCAAGTATGATTTTAGGTCCA
AAGGAAAAGGTTGTATTGCTGAAAATTGGGGACAGATATTTATTAATAGGTGTAGGGTCATATTCCATTAATCTAATATG
TGATTTTGGCAATCAACTTCCTGAAGGGTTTGATGCTGATCAAAAATCGTCTTTTGCCGATGTGCTGAAATCAGCAATAG
GAAAATCATAA

Upstream 100 bases:

>100_bases
GTACTTTGGTCGCACATGGTGAAGTCGTTGTAGTTAACGATAAATTTGGTGTCAGATTAACTGATATCGTTAGCAAGGCT
GAACGAATAAAACGTCTCAA

Downstream 100 bases:

>100_bases
ATGAAAATTAAAAGTTGGTTACTGATTTTGATATTATTTCTTTTATTACCTGTTGCAGGTCACACAGACCCTTTATCCTT
TCCCGTTGTTACAATGCAAC

Product: flagellar assembly protein FliO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKSKVLHLAFLSLSLISSVGWSSTLSPNTISYGELIRIISGLLFVLFIIIFLSWIVKRMHRVNFTSSKGFQTVASMILGP
KEKVVLLKIGDRYLLIGVGSYSINLICDFGNQLPEGFDADQKSSFADVLKSAIGKS

Sequences:

>Translated_136_residues
MKSKVLHLAFLSLSLISSVGWSSTLSPNTISYGELIRIISGLLFVLFIIIFLSWIVKRMHRVNFTSSKGFQTVASMILGP
KEKVVLLKIGDRYLLIGVGSYSINLICDFGNQLPEGFDADQKSSFADVLKSAIGKS
>Mature_136_residues
MKSKVLHLAFLSLSLISSVGWSSTLSPNTISYGELIRIISGLLFVLFIIIFLSWIVKRMHRVNFTSSKGFQTVASMILGP
KEKVVLLKIGDRYLLIGVGSYSINLICDFGNQLPEGFDADQKSSFADVLKSAIGKS

Specific function: Unknown

COG id: COG3190

COG function: function code N; Flagellar biogenesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14945; Mature: 14945

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKVLHLAFLSLSLISSVGWSSTLSPNTISYGELIRIISGLLFVLFIIIFLSWIVKRMH
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVNFTSSKGFQTVASMILGPKEKVVLLKIGDRYLLIGVGSYSINLICDFGNQLPEGFDAD
HCCCCCCCHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCEEEEEEECCCCCCCCCCCC
QKSSFADVLKSAIGKS
CHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSKVLHLAFLSLSLISSVGWSSTLSPNTISYGELIRIISGLLFVLFIIIFLSWIVKRMH
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVNFTSSKGFQTVASMILGPKEKVVLLKIGDRYLLIGVGSYSINLICDFGNQLPEGFDAD
HCCCCCCCHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCEEEEEEECCCCCCCCCCCC
QKSSFADVLKSAIGKS
CHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA