Click here to switch to the map view.

The map label for this gene is lolA

Identifier: 52841992

GI number: 52841992

Start: 1970952

End: 1971566

Strand: Reverse

Name: lolA

Synonym: lpg1765

Alternate gene names: 52841992

Gene position: 1971566-1970952 (Counterclockwise)

Preceding gene: 52841993

Following gene: 52841991

Centisome position: 58.03

GC content: 35.93

Gene sequence:

>615_bases
CTGAATATGAATAAATTGTTTCTCATTTTGTTGCTCATTTTTTCGCATGAAGTGTTTAGTCAAACTTCTGCCGAAGTACT
GCAGAGTAAATTAAATGCTATACAAACCATGACTGCAAATTTTAGTCAAATTGTAAAGGCAAAGAATCGTGAAGTGTCAC
GATCTTCAGGTTCCATGGCATTGCAACGTCCTGGACGATTTCGCTGGCAAACAAAAGATCCATTGGAACAATTAATTGTT
GCTGACGGCCAAAAAATGTGGATTTATGATGTGGACCTTGAACAAGTCACAGTCAAAAATCAGGAAAAGGGACTAGGTGG
TACTGCTGCATTGTTTTTGAGCGGCTATGATGAAACTCTTACTCATGATTTCGATGTCAGTGAAAAACAAAAAGGGAAAT
TGACCGTTTTTGATTTGAAATCCAAATCTGCAAAAGAAAATTTTCAAAGAATTAAGTTAATTTTTAGTCAAAGTACTTTG
ATTGGTCTGGAGTTATATGATCAGCTAGGCCAAATTACTGATGTTAAATTAGTGCAGATTAAGTCAAATCCTAAGTTACC
TGCCAAATTGTTCCAATTCAAGCCCCCTAAAGGTGTGGATGTGGTAAAACAATAA

Upstream 100 bases:

>100_bases
ATCGCGCTGCCAGAATGATAGAGGAAATGGAGAGGACAGGAATAGTCGGTCCATTGGATGGTGGTTATCGTGACGTATTA
GTAACATCAGTGACTGAGGA

Downstream 100 bases:

>100_bases
TTTTAATGTTGATTTATGAGCCTATTCAATAAAGAACCTGATCCACCATTGGCTGAAAGTTTAAGGCCTCAGCATATCGA
TGAGGTCATAGGTCAAAGTC

Product: outer membrane lipoprotein carrier protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MNMNKLFLILLLIFSHEVFSQTSAEVLQSKLNAIQTMTANFSQIVKAKNREVSRSSGSMALQRPGRFRWQTKDPLEQLIV
ADGQKMWIYDVDLEQVTVKNQEKGLGGTAALFLSGYDETLTHDFDVSEKQKGKLTVFDLKSKSAKENFQRIKLIFSQSTL
IGLELYDQLGQITDVKLVQIKSNPKLPAKLFQFKPPKGVDVVKQ

Sequences:

>Translated_204_residues
MNMNKLFLILLLIFSHEVFSQTSAEVLQSKLNAIQTMTANFSQIVKAKNREVSRSSGSMALQRPGRFRWQTKDPLEQLIV
ADGQKMWIYDVDLEQVTVKNQEKGLGGTAALFLSGYDETLTHDFDVSEKQKGKLTVFDLKSKSAKENFQRIKLIFSQSTL
IGLELYDQLGQITDVKLVQIKSNPKLPAKLFQFKPPKGVDVVKQ
>Mature_204_residues
MNMNKLFLILLLIFSHEVFSQTSAEVLQSKLNAIQTMTANFSQIVKAKNREVSRSSGSMALQRPGRFRWQTKDPLEQLIV
ADGQKMWIYDVDLEQVTVKNQEKGLGGTAALFLSGYDETLTHDFDVSEKQKGKLTVFDLKSKSAKENFQRIKLIFSQSTL
IGLELYDQLGQITDVKLVQIKSNPKLPAKLFQFKPPKGVDVVKQ

Specific function: Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the l

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolA family [H]

Homologues:

Organism=Escherichia coli, GI145693108, Length=207, Percent_Identity=24.1545893719807, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004564
- InterPro:   IPR018323 [H]

Pfam domain/function: PF03548 LolA [H]

EC number: NA

Molecular weight: Translated: 23097; Mature: 23097

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMNKLFLILLLIFSHEVFSQTSAEVLQSKLNAIQTMTANFSQIVKAKNREVSRSSGSMA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
LQRPGRFRWQTKDPLEQLIVADGQKMWIYDVDLEQVTVKNQEKGLGGTAALFLSGYDETL
ECCCCCCCCCCCCHHHHHHHCCCCEEEEEECCHHHEEECCCCCCCCCEEEEEEECCCHHH
THDFDVSEKQKGKLTVFDLKSKSAKENFQRIKLIFSQSTLIGLELYDQLGQITDVKLVQI
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCEEEEEE
KSNPKLPAKLFQFKPPKGVDVVKQ
ECCCCCCHHHHCCCCCCCCHHCCC
>Mature Secondary Structure
MNMNKLFLILLLIFSHEVFSQTSAEVLQSKLNAIQTMTANFSQIVKAKNREVSRSSGSMA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
LQRPGRFRWQTKDPLEQLIVADGQKMWIYDVDLEQVTVKNQEKGLGGTAALFLSGYDETL
ECCCCCCCCCCCCHHHHHHHCCCCEEEEEECCHHHEEECCCCCCCCCEEEEEEECCCHHH
THDFDVSEKQKGKLTVFDLKSKSAKENFQRIKLIFSQSTLIGLELYDQLGQITDVKLVQI
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCEEEEEE
KSNPKLPAKLFQFKPPKGVDVVKQ
ECCCCCCHHHHCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA