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The map label for this gene is ahlD [H]

Identifier: 52841857

GI number: 52841857

Start: 1799502

End: 1800338

Strand: Reverse

Name: ahlD [H]

Synonym: lpg1629

Alternate gene names: 52841857

Gene position: 1800338-1799502 (Counterclockwise)

Preceding gene: 52841858

Following gene: 52841856

Centisome position: 52.99

GC content: 37.04

Gene sequence:

>837_bases
ATGGTATTGTTCATGCATATAGAGTATCAGTTATTTGAAGCTGGCTATTGCAAACATTGCGAACGCATGACTTTAAAAAA
TGGGAAAATCAGACAGCGTGAATATCCATCCTTCTGTGCTCTTATAAAACACCCAAGTCACGGATATATTTTATTTGACA
CAGGATATTCTGACCGTTTTACCTGCTTAACCCAAAAATTTCCAGCCTCTATATATCGTCATTTAACTCCTATGACACTT
GTAAAATCCTTAAAAGAACAGTTGCTAGAAATTCATATAAAACCCGAAGATATCAATTATATTGTGATTTCGCATTTTCA
TGCTGATCACATTGGAGGATTATGCGATTTTCCTAATGCTCATTTTATATGTCATTCTGATGCGATAGACGATATTCAGC
ATACAAAGGGGTTGAAAGCGTTATTGAAAGGTTTTTTACCTGGACTGATACCTGAAGATTTCTTTGAGCGTTTATTACCA
CTTCAAAAAACAATCCAACTTGACGAGCATCTTTTACCTTTTTCTGATGGTTTTGATGTATTGGGTGACAACTCATTGAT
TGCTATTCCTTTACCGGGACACGCTAAAGGACAAATCGGCTTATATTTTAAAGCGCCTGGCGACATTTTCCTGGTTGCGG
ACAGTTGCTGGCACCAGGAAACTTTTAAAGAACTCATTTATCCGAGCGCTTTGACCTATTTGATTCATCATGACAAGCGT
GCCTATTTAAAGACAATTCAAAAATTGCACGAACTACATCAGAGAAACAAGACTATTGAAATTATTCCTTCTCACTGCCA
ACAATTGCGCTCGAGAATTGGGAACCCATTATGTTAG

Upstream 100 bases:

>100_bases
TGTTGGCTTTTGGACAAACATTAAATATTGAAGAGGCAAAAAAAGATTTAAAGTATAAGCCAATTTATAGCATTGATGAG
GGTATAATGAAATTTGCTGA

Downstream 100 bases:

>100_bases
CACGTATTCTATTTCACTATTTCAATACACTTTATCTTAATAAAACTATTACTACCCCGGCAAAATTAAAGCTTCATCAA
GCAAAACAATTTAAAAAACT

Product: Zn-dependent hydrolase GumP

Products: NA

Alternate protein names: AHL-lactonase [H]

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MVLFMHIEYQLFEAGYCKHCERMTLKNGKIRQREYPSFCALIKHPSHGYILFDTGYSDRFTCLTQKFPASIYRHLTPMTL
VKSLKEQLLEIHIKPEDINYIVISHFHADHIGGLCDFPNAHFICHSDAIDDIQHTKGLKALLKGFLPGLIPEDFFERLLP
LQKTIQLDEHLLPFSDGFDVLGDNSLIAIPLPGHAKGQIGLYFKAPGDIFLVADSCWHQETFKELIYPSALTYLIHHDKR
AYLKTIQKLHELHQRNKTIEIIPSHCQQLRSRIGNPLC

Sequences:

>Translated_278_residues
MVLFMHIEYQLFEAGYCKHCERMTLKNGKIRQREYPSFCALIKHPSHGYILFDTGYSDRFTCLTQKFPASIYRHLTPMTL
VKSLKEQLLEIHIKPEDINYIVISHFHADHIGGLCDFPNAHFICHSDAIDDIQHTKGLKALLKGFLPGLIPEDFFERLLP
LQKTIQLDEHLLPFSDGFDVLGDNSLIAIPLPGHAKGQIGLYFKAPGDIFLVADSCWHQETFKELIYPSALTYLIHHDKR
AYLKTIQKLHELHQRNKTIEIIPSHCQQLRSRIGNPLC
>Mature_278_residues
MVLFMHIEYQLFEAGYCKHCERMTLKNGKIRQREYPSFCALIKHPSHGYILFDTGYSDRFTCLTQKFPASIYRHLTPMTL
VKSLKEQLLEIHIKPEDINYIVISHFHADHIGGLCDFPNAHFICHSDAIDDIQHTKGLKALLKGFLPGLIPEDFFERLLP
LQKTIQLDEHLLPFSDGFDVLGDNSLIAIPLPGHAKGQIGLYFKAPGDIFLVADSCWHQETFKELIYPSALTYLIHHDKR
AYLKTIQKLHELHQRNKTIEIIPSHCQQLRSRIGNPLC

Specific function: Hydrolyzes the acyl homoserine lactones N-hexanoyl-L- homoserine lactone, N-3-oxohexanoyl-L-homoserine lactone, N- octonoyl-L-homoserine lactone, N-decanoyl-L-homoserine lactone and N-3-oxododecanoyl-L-homoserine lactone [H]

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: =3.1.1.81 [H]

Molecular weight: Translated: 32055; Mature: 32055

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLFMHIEYQLFEAGYCKHCERMTLKNGKIRQREYPSFCALIKHPSHGYILFDTGYSDRF
CEEEEEEEEHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCEEEEECCCCCCH
TCLTQKFPASIYRHLTPMTLVKSLKEQLLEIHIKPEDINYIVISHFHADHIGGLCDFPNA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCCEEEEEECCHHHCCCCCCCCCC
HFICHSDAIDDIQHTKGLKALLKGFLPGLIPEDFFERLLPLQKTIQLDEHLLPFSDGFDV
EEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LGDNSLIAIPLPGHAKGQIGLYFKAPGDIFLVADSCWHQETFKELIYPSALTYLIHHDKR
CCCCCEEEEECCCCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCH
AYLKTIQKLHELHQRNKTIEIIPSHCQQLRSRIGNPLC
HHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVLFMHIEYQLFEAGYCKHCERMTLKNGKIRQREYPSFCALIKHPSHGYILFDTGYSDRF
CEEEEEEEEHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCEEEEECCCCCCH
TCLTQKFPASIYRHLTPMTLVKSLKEQLLEIHIKPEDINYIVISHFHADHIGGLCDFPNA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCCEEEEEECCHHHCCCCCCCCCC
HFICHSDAIDDIQHTKGLKALLKGFLPGLIPEDFFERLLPLQKTIQLDEHLLPFSDGFDV
EEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LGDNSLIAIPLPGHAKGQIGLYFKAPGDIFLVADSCWHQETFKELIYPSALTYLIHHDKR
CCCCCEEEEECCCCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCH
AYLKTIQKLHELHQRNKTIEIIPSHCQQLRSRIGNPLC
HHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12777494 [H]