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The map label for this gene is 52841845

Identifier: 52841845

GI number: 52841845

Start: 1785236

End: 1786108

Strand: Direct

Name: 52841845

Synonym: lpg1617

Alternate gene names: NA

Gene position: 1785236-1786108 (Clockwise)

Preceding gene: 52841836

Following gene: 52841852

Centisome position: 52.54

GC content: 35.17

Gene sequence:

>873_bases
ATGGATAAGAACCTAAAATTAATGTTTCTACTGGTTTATGTAATTAGCCTTGTATTACTTTCAGCATGTTGTTTTGGGGC
ACCCAATTCAATAGAAAAACAACTTAAAATAATTATTGCAAATAAGGCATATACGCTGTCAGATCTTAAAAAACAGTTTA
AAACCATACGTGTTAGCATCCCCTTTAATCCTGCTTATAATAATGTGAAAAAAGTATATTATGCTTTTGATATGAATCAG
ATTTTAACAAAATTGTTGGCAGTAGATTTACAAAAGAACAATGTAGACCAGGTATTATTAGCTCAAACAGCAGATAACTA
TATGTCTCAAACCCCCCTGTTGTATTTTACGACAAAAGGTCAAGCCTATCTTGCTTATCAAGAAGCGCCCGAAACAATTT
CTGACAAGGACATCACCAAAGATGGTCGCTGGAGTTATATTAATCAACACGGTAAAAAAGATAATCCCGGCCCTTTCTAT
ATTGTATGGGATAATACAAGCACCTACCCTGCCGGTTGGCCATACCAGGTTATTTCGATTCAAATAGTGAATAAAAAAGA
CCTTGCTTTTTCTCGTTTCTTAAATCCTTTGCATGAATCAGAGTCTATAAAAAATGGTCATCATATTTTTAATAATATGT
GCTCCACTTGCCACTCTATATTTTACAAGGGTGCTCAAGGACGCGCACCAGACTTAGGCAAAGTGACGAGCTACTTAACA
CCTTCTGATATCAGTAAGCTTGTAAAGCATGGACGAGGATACATGCCACCGATAGGCAAAAACCTCTCTACGGAAGAAAT
TAATGATCTCATTAAATTTTTAATCTGGGTTAACAGACAATCATCCAAACTAAAATGCGAAATTAATGACTAA

Upstream 100 bases:

>100_bases
AACCGGGAAATATCACTTGGAAGTGCTTCTATTATAAACCATAATAACTAGTGTCAGGATAGAAAAAATCTGAATTGTTT
TCAAAAAACAAGAAGGACTT

Downstream 100 bases:

>100_bases
GGATATAATTTAGGACTTTGTAGCTACCGATGACAAGCAGCAGCAACTCCTGGAATGTGTGTGACTATAGTTGGCAGATT
TGGGTAATCGGAACAGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MDKNLKLMFLLVYVISLVLLSACCFGAPNSIEKQLKIIIANKAYTLSDLKKQFKTIRVSIPFNPAYNNVKKVYYAFDMNQ
ILTKLLAVDLQKNNVDQVLLAQTADNYMSQTPLLYFTTKGQAYLAYQEAPETISDKDITKDGRWSYINQHGKKDNPGPFY
IVWDNTSTYPAGWPYQVISIQIVNKKDLAFSRFLNPLHESESIKNGHHIFNNMCSTCHSIFYKGAQGRAPDLGKVTSYLT
PSDISKLVKHGRGYMPPIGKNLSTEEINDLIKFLIWVNRQSSKLKCEIND

Sequences:

>Translated_290_residues
MDKNLKLMFLLVYVISLVLLSACCFGAPNSIEKQLKIIIANKAYTLSDLKKQFKTIRVSIPFNPAYNNVKKVYYAFDMNQ
ILTKLLAVDLQKNNVDQVLLAQTADNYMSQTPLLYFTTKGQAYLAYQEAPETISDKDITKDGRWSYINQHGKKDNPGPFY
IVWDNTSTYPAGWPYQVISIQIVNKKDLAFSRFLNPLHESESIKNGHHIFNNMCSTCHSIFYKGAQGRAPDLGKVTSYLT
PSDISKLVKHGRGYMPPIGKNLSTEEINDLIKFLIWVNRQSSKLKCEIND
>Mature_290_residues
MDKNLKLMFLLVYVISLVLLSACCFGAPNSIEKQLKIIIANKAYTLSDLKKQFKTIRVSIPFNPAYNNVKKVYYAFDMNQ
ILTKLLAVDLQKNNVDQVLLAQTADNYMSQTPLLYFTTKGQAYLAYQEAPETISDKDITKDGRWSYINQHGKKDNPGPFY
IVWDNTSTYPAGWPYQVISIQIVNKKDLAFSRFLNPLHESESIKNGHHIFNNMCSTCHSIFYKGAQGRAPDLGKVTSYLT
PSDISKLVKHGRGYMPPIGKNLSTEEINDLIKFLIWVNRQSSKLKCEIND

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33039; Mature: 33039

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKNLKLMFLLVYVISLVLLSACCFGAPNSIEKQLKIIIANKAYTLSDLKKQFKTIRVSI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEECCCCCHHHHHHHHHEEEEEE
PFNPAYNNVKKVYYAFDMNQILTKLLAVDLQKNNVDQVLLAQTADNYMSQTPLLYFTTKG
CCCCCCCCHHHEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECC
QAYLAYQEAPETISDKDITKDGRWSYINQHGKKDNPGPFYIVWDNTSTYPAGWPYQVISI
CEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEE
QIVNKKDLAFSRFLNPLHESESIKNGHHIFNNMCSTCHSIFYKGAQGRAPDLGKVTSYLT
EEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCC
PSDISKLVKHGRGYMPPIGKNLSTEEINDLIKFLIWVNRQSSKLKCEIND
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure
MDKNLKLMFLLVYVISLVLLSACCFGAPNSIEKQLKIIIANKAYTLSDLKKQFKTIRVSI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEECCCCCHHHHHHHHHEEEEEE
PFNPAYNNVKKVYYAFDMNQILTKLLAVDLQKNNVDQVLLAQTADNYMSQTPLLYFTTKG
CCCCCCCCHHHEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECC
QAYLAYQEAPETISDKDITKDGRWSYINQHGKKDNPGPFYIVWDNTSTYPAGWPYQVISI
CEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEE
QIVNKKDLAFSRFLNPLHESESIKNGHHIFNNMCSTCHSIFYKGAQGRAPDLGKVTSYLT
EEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCC
PSDISKLVKHGRGYMPPIGKNLSTEEINDLIKFLIWVNRQSSKLKCEIND
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA