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The map label for this gene is yefC [C]

Identifier: 52841836

GI number: 52841836

Start: 1774858

End: 1775340

Strand: Direct

Name: yefC [C]

Synonym: lpg1608

Alternate gene names: 52841836

Gene position: 1774858-1775340 (Clockwise)

Preceding gene: 52841835

Following gene: 52841845

Centisome position: 52.24

GC content: 40.58

Gene sequence:

>483_bases
ATGAGTTTCAGTATGAAGATAAAAAATATCCCTTATTATGTCGCTACCCGTGTCGTGAAACGAATACAGTCATGGTTGGG
ATTGAATACTCTGGGTGCACGAGCAATAGTGACGAATGCAGAGGGACACGTGTTATTGGTAAAACATACCTACCAACCTC
ATTGGTATTTACCGGGAGGCGGAGTAAAAAAAGGAGAATCAACCAAGGCTGCAGTAATCCGTGAACTGCACGAAGAAGTT
GGTCTTGTTGTTGCAGAACAAGACGTGATTTTATTCGGCATTTATCACCACAAATATCTTGGAGTTAATGATTATCCAGT
AATTTATATTGTTAAAAACTTTACAAGTCATGTAACTCACTCGGGGGAAATTGAGCAGATAGGATGGTTTTCCCTTGATG
CATTACCGGAAATGGTGAGCCCGGGAACCAAACGCAGACTCGGTGAATATTTTGATAACAATCCAATATCAGAAAAGTGG
TGA

Upstream 100 bases:

>100_bases
AAAACTAATGAAATTTGAACTTAAAAGATATCCAGTGCTCGTCATGGCAAGTATTCTGTAAAGAATAGGGATAAGTTGAG
AAATATAAAATATACAATAA

Downstream 100 bases:

>100_bases
TTATTGCAGTTGTCATTGTTGGGTGGGGTGCTGAGAAAATATGGTTATGCTCAATCTCTAATTTGTCCCGTCCCTCTTAT
CACCCATTTGTAGCTTGTTA

Product: MutT/nudix family protein

Products: GDP; mannose [C]

Alternate protein names: Nudix Hydrolase; MutT/Nudix Family Protein; Hydrolase Protein; Hydrolase Protein MutT/Nudix Family; MutT/NUDIX Family Protein; NUDIX Family Hydrolase; MutT/NUDIX Family Hydrolase; Mutt/Nudix Family Protein; Hydrolase NUDIX Family

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSFSMKIKNIPYYVATRVVKRIQSWLGLNTLGARAIVTNAEGHVLLVKHTYQPHWYLPGGGVKKGESTKAAVIRELHEEV
GLVVAEQDVILFGIYHHKYLGVNDYPVIYIVKNFTSHVTHSGEIEQIGWFSLDALPEMVSPGTKRRLGEYFDNNPISEKW

Sequences:

>Translated_160_residues
MSFSMKIKNIPYYVATRVVKRIQSWLGLNTLGARAIVTNAEGHVLLVKHTYQPHWYLPGGGVKKGESTKAAVIRELHEEV
GLVVAEQDVILFGIYHHKYLGVNDYPVIYIVKNFTSHVTHSGEIEQIGWFSLDALPEMVSPGTKRRLGEYFDNNPISEKW
>Mature_159_residues
SFSMKIKNIPYYVATRVVKRIQSWLGLNTLGARAIVTNAEGHVLLVKHTYQPHWYLPGGGVKKGESTKAAVIRELHEEVG
LVVAEQDVILFGIYHHKYLGVNDYPVIYIVKNFTSHVTHSGEIEQIGWFSLDALPEMVSPGTKRRLGEYFDNNPISEKW

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18151; Mature: 18020

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSMKIKNIPYYVATRVVKRIQSWLGLNTLGARAIVTNAEGHVLLVKHTYQPHWYLPGG
CCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCEECCCC
GVKKGESTKAAVIRELHEEVGLVVAEQDVILFGIYHHKYLGVNDYPVIYIVKNFTSHVTH
CCCCCCCHHHHHHHHHHHHHCEEEECCCEEEEEEEHHEEECCCCCEEEEEEECHHHHCCC
SGEIEQIGWFSLDALPEMVSPGTKRRLGEYFDNNPISEKW
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SFSMKIKNIPYYVATRVVKRIQSWLGLNTLGARAIVTNAEGHVLLVKHTYQPHWYLPGG
CCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCEECCCC
GVKKGESTKAAVIRELHEEVGLVVAEQDVILFGIYHHKYLGVNDYPVIYIVKNFTSHVTH
CCCCCCCHHHHHHHHHHHHHCEEEECCCEEEEEEEHHEEECCCCCEEEEEEECHHHHCCC
SGEIEQIGWFSLDALPEMVSPGTKRRLGEYFDNNPISEKW
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GDP-mannose; H2O [C]

Specific reaction: GDP-mannose + H2O = GDP + mannose [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA