| Definition | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome. |
|---|---|
| Accession | NC_002942 |
| Length | 3,397,754 |
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The map label for this gene is cyaB [H]
Identifier: 52841745
GI number: 52841745
Start: 1676654
End: 1678285
Strand: Direct
Name: cyaB [H]
Synonym: lpg1515
Alternate gene names: 52841745
Gene position: 1676654-1678285 (Clockwise)
Preceding gene: 52841744
Following gene: 52841746
Centisome position: 49.35
GC content: 37.01
Gene sequence:
>1632_bases TTGAGTATATACTTAAATAAAATAAATAATATAAAGAATAATCATAAAAATCATATGAATACTCCGAGAAGACAATCATG GTCTCATATTGATTTGGGTGAACTAGCCAAGAATGACTCTCTGCTAGCCTGCCTGGTATTATTAACTCGATATTATCAAA ATCCGTTTTCGCCTCCATCACTTATAGCTCGTTTGCCATTGGTCAATAGTAAATTGAGTGTTGATATGTTTTCGCGTGCC GCTGCCAGAGCCTCTTTGGATTCTGAAGTCAAAACTATAAAATTAGAACAAATCACTGATTCAGATATTCCCTTAGTATT GATTAAAAAAAATGGCGAGGCTGTGCTTCTAATACTGGAGGATGATGGTAAAAAAGCAATCCTTGATCCCAAGCAACCTG ATTCCCGGATTGATTTGAACCAAATTGCCGATGAGTTAAGTGGTGAAGTCATTTTTGTTGAGCAACAATACAAACCTAGC ACCAGAGCACATGAAACTCTTTCCAAAGAGCAAAAAAACTGGTTTTGGAAAGTTGTTATTAAATCTTGGCCATTGTATTC TGAAGTTCTTGTGGCCTCCTTGCTCGTGAATATATTTGCACTCGTTGTTCCATTATTTAGCATGAATGTGTATGACCGTG TGGTTCCAAACCATGCTATTGAAACCATGTGGGTGCTTGCTAGTGGTGTAGCTTTGGTATTTCTCTTTGATATGTTGCTC AAGAGTTTACGATCCTATTTCATTGATGTGGCAAATAAACACAGTGATAAAGAGTTGTCTGCTTTAATATTTCAGCAAGT TCTCGGATTAAGTATGGCTAACAGGCCAAAATCGGTTGGTTCTTTAGCCAATACAGTACAGTCATTTGAAGTATTCAGAG ATTTTATTACTTCGACTACTATGACAGTTCTTGTTGATCTTCCTTTTGTATTTATTTTTCTTTTTGTTATTTATTTGATT GGCGGGGTGTTGTTTTGGATACCTTTTTTAGTGCTCCCTACTATTTTTATAACAGGTTTGTTGCTGCAATGGCCTTTAAT TCGACTTACAAGAAAATCCTATCAATATGGTGCTGAAAAACAAGCGACGTTGTTTGAGTCTTTAGCTACTATAGAAACTG TAAAGACAACTGGAGCAGAATCAGTCCTGCAATCACGGTGGGAAAGAATAATTAATGAATCTTCTAAAAACTCTATGCAA TTACGTTTTGTAGCCAATACAAGTATCAGTATCACTAATCTGGCCCAACAAATTGCGACTATCGCTATTATTATTGCAGG TGTTTATATGATCTCCGAAGGTGAGTTAACTACCGGTGGATTAATTGCCTGTACCATATTGACCGGAAGAGCATTGGCGC CAATGGCGCAGGTATCCACTCTATTTACACGTTACTTCCAATCAGTTAATGCTCTGGACTCATTAAACAAGATTATGCAA CTTGAGACAGATACCACAGAAGAAACTCGTTATCTCCACAGACCTTCTCTGAAAGGTGCCGTTGAATTTAAACAGGTGTC TTTTCATTACAAGGAAGATGAGACGAAGGTATTACAAAATCTTAATTTTAAAATTAATGCTGGTGAGCGCGTTGCAATTA TAGGACGAGTTGGTTCACTTTGGGAAAACTAA
Upstream 100 bases:
>100_bases AGCTTTATAAGCAAATAACAGAATCACTCAAACCCTTTAAAAAGACTAAATTTACTGCTTAATATAAAGATTAGTCTTTT TATTATTTTATTTAAGTAAT
Downstream 100 bases:
>100_bases TATTAAAGCTTTACGTTCCTAACGAAGGAACTATTTTGCTGGATGGCACCGATTATAAGCAAATTAATCCTGACGATTTA CGTCAGCAAATAGGTTATGT
Product: toxin secretion ATP binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MSIYLNKINNIKNNHKNHMNTPRRQSWSHIDLGELAKNDSLLACLVLLTRYYQNPFSPPSLIARLPLVNSKLSVDMFSRA AARASLDSEVKTIKLEQITDSDIPLVLIKKNGEAVLLILEDDGKKAILDPKQPDSRIDLNQIADELSGEVIFVEQQYKPS TRAHETLSKEQKNWFWKVVIKSWPLYSEVLVASLLVNIFALVVPLFSMNVYDRVVPNHAIETMWVLASGVALVFLFDMLL KSLRSYFIDVANKHSDKELSALIFQQVLGLSMANRPKSVGSLANTVQSFEVFRDFITSTTMTVLVDLPFVFIFLFVIYLI GGVLFWIPFLVLPTIFITGLLLQWPLIRLTRKSYQYGAEKQATLFESLATIETVKTTGAESVLQSRWERIINESSKNSMQ LRFVANTSISITNLAQQIATIAIIIAGVYMISEGELTTGGLIACTILTGRALAPMAQVSTLFTRYFQSVNALDSLNKIMQ LETDTTEETRYLHRPSLKGAVEFKQVSFHYKEDETKVLQNLNFKINAGERVAIIGRVGSLWEN
Sequences:
>Translated_543_residues MSIYLNKINNIKNNHKNHMNTPRRQSWSHIDLGELAKNDSLLACLVLLTRYYQNPFSPPSLIARLPLVNSKLSVDMFSRA AARASLDSEVKTIKLEQITDSDIPLVLIKKNGEAVLLILEDDGKKAILDPKQPDSRIDLNQIADELSGEVIFVEQQYKPS TRAHETLSKEQKNWFWKVVIKSWPLYSEVLVASLLVNIFALVVPLFSMNVYDRVVPNHAIETMWVLASGVALVFLFDMLL KSLRSYFIDVANKHSDKELSALIFQQVLGLSMANRPKSVGSLANTVQSFEVFRDFITSTTMTVLVDLPFVFIFLFVIYLI GGVLFWIPFLVLPTIFITGLLLQWPLIRLTRKSYQYGAEKQATLFESLATIETVKTTGAESVLQSRWERIINESSKNSMQ LRFVANTSISITNLAQQIATIAIIIAGVYMISEGELTTGGLIACTILTGRALAPMAQVSTLFTRYFQSVNALDSLNKIMQ LETDTTEETRYLHRPSLKGAVEFKQVSFHYKEDETKVLQNLNFKINAGERVAIIGRVGSLWEN >Mature_542_residues SIYLNKINNIKNNHKNHMNTPRRQSWSHIDLGELAKNDSLLACLVLLTRYYQNPFSPPSLIARLPLVNSKLSVDMFSRAA ARASLDSEVKTIKLEQITDSDIPLVLIKKNGEAVLLILEDDGKKAILDPKQPDSRIDLNQIADELSGEVIFVEQQYKPST RAHETLSKEQKNWFWKVVIKSWPLYSEVLVASLLVNIFALVVPLFSMNVYDRVVPNHAIETMWVLASGVALVFLFDMLLK SLRSYFIDVANKHSDKELSALIFQQVLGLSMANRPKSVGSLANTVQSFEVFRDFITSTTMTVLVDLPFVFIFLFVIYLIG GVLFWIPFLVLPTIFITGLLLQWPLIRLTRKSYQYGAEKQATLFESLATIETVKTTGAESVLQSRWERIINESSKNSMQL RFVANTSISITNLAQQIATIAIIIAGVYMISEGELTTGGLIACTILTGRALAPMAQVSTLFTRYFQSVNALDSLNKIMQL ETDTTEETRYLHRPSLKGAVEFKQVSFHYKEDETKVLQNLNFKINAGERVAIIGRVGSLWEN
Specific function: Involved in the export of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) [H]
COG id: COG2274
COG function: function code V; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 peptidase C39 domain [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324985, Length=219, Percent_Identity=26.4840182648402, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017940 - InterPro: IPR001140 - InterPro: IPR011527 - InterPro: IPR003593 - InterPro: IPR010132 - InterPro: IPR005074 [H]
Pfam domain/function: PF00664 ABC_membrane; PF00005 ABC_tran; PF03412 Peptidase_C39 [H]
EC number: NA
Molecular weight: Translated: 61222; Mature: 61091
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS50990 PEPTIDASE_C39 ; PS50929 ABC_TM1F
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIYLNKINNIKNNHKNHMNTPRRQSWSHIDLGELAKNDSLLACLVLLTRYYQNPFSPPS CEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCHH LIARLPLVNSKLSVDMFSRAAARASLDSEVKTIKLEQITDSDIPLVLIKKNGEAVLLILE HHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCEEEEECCCCEEEEEEE DDGKKAILDPKQPDSRIDLNQIADELSGEVIFVEQQYKPSTRAHETLSKEQKNWFWKVVI CCCCEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHEEEEHH KSWPLYSEVLVASLLVNIFALVVPLFSMNVYDRVVPNHAIETMWVLASGVALVFLFDMLL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH KSLRSYFIDVANKHSDKELSALIFQQVLGLSMANRPKSVGSLANTVQSFEVFRDFITSTT HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH MTVLVDLPFVFIFLFVIYLIGGVLFWIPFLVLPTIFITGLLLQWPLIRLTRKSYQYGAEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH QATLFESLATIETVKTTGAESVLQSRWERIINESSKNSMQLRFVANTSISITNLAQQIAT HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHH IAIIIAGVYMISEGELTTGGLIACTILTGRALAPMAQVSTLFTRYFQSVNALDSLNKIMQ HHHHHHHHHHEECCCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LETDTTEETRYLHRPSLKGAVEFKQVSFHYKEDETKVLQNLNFKINAGERVAIIGRVGSL CCCCCCHHHHHHCCCCCCCCHHHHHHEEECCCHHHHHHHCCCEEECCCCEEEEEECHHHH WEN CCC >Mature Secondary Structure SIYLNKINNIKNNHKNHMNTPRRQSWSHIDLGELAKNDSLLACLVLLTRYYQNPFSPPS EEEEEHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCHH LIARLPLVNSKLSVDMFSRAAARASLDSEVKTIKLEQITDSDIPLVLIKKNGEAVLLILE HHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCEEEEECCCCEEEEEEE DDGKKAILDPKQPDSRIDLNQIADELSGEVIFVEQQYKPSTRAHETLSKEQKNWFWKVVI CCCCEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHEEEEHH KSWPLYSEVLVASLLVNIFALVVPLFSMNVYDRVVPNHAIETMWVLASGVALVFLFDMLL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH KSLRSYFIDVANKHSDKELSALIFQQVLGLSMANRPKSVGSLANTVQSFEVFRDFITSTT HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH MTVLVDLPFVFIFLFVIYLIGGVLFWIPFLVLPTIFITGLLLQWPLIRLTRKSYQYGAEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH QATLFESLATIETVKTTGAESVLQSRWERIINESSKNSMQLRFVANTSISITNLAQQIAT HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHH IAIIIAGVYMISEGELTTGGLIACTILTGRALAPMAQVSTLFTRYFQSVNALDSLNKIMQ HHHHHHHHHHEECCCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LETDTTEETRYLHRPSLKGAVEFKQVSFHYKEDETKVLQNLNFKINAGERVAIIGRVGSL CCCCCCHHHHHHCCCCCCCCHHHHHHEEECCCHHHHHHHCCCEEECCCCEEEEEECHHHH WEN CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2905265; 12910271 [H]