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The map label for this gene is 52841640

Identifier: 52841640

GI number: 52841640

Start: 1556214

End: 1556810

Strand: Direct

Name: 52841640

Synonym: lpg1410

Alternate gene names: NA

Gene position: 1556214-1556810 (Clockwise)

Preceding gene: 52841638

Following gene: 52841641

Centisome position: 45.8

GC content: 40.54

Gene sequence:

>597_bases
ATGAAGATTCGATTTACTTTACTTTGTTTTAGCATTTTTCTTACGGGCTGCGTCAGCAAACCGCCAGCAGATATTAATAA
TATTTGTAATATATTTAAACAATATCCGAAATGGTATGTGGACTCAAAGGATGTTGAGCGACGCTGGAAGGTTCCGGTTC
CGGTCCAAATGGCAATTATTCATCAAGAATCAAAATTTAATGCTCGAGCCAGGCCACCAAGAACCAAACTGTTATGGATA
ATTCCATGGACAAGGCCATCGACAGCTTACGGATATACTCAGGCGTTGCGTTCGACTTGGGACAATTATAAACGCACCAA
TGGATGGTTTTGGTCATCACGCGACGATTTTGGAGATGGTGTTGATTTTATAGGATGGTATGCTAACCAGGCGAATATTA
AGGCAGGTATTCCCCGAACAGATGCTTACTCACTTTATTTGGCTTATCATGAAGGGATAGGTGGTTATCAAAGGAAAACC
TATTTGAAAAAACCATGGTTGATTTCTGTAGCGCGCAAAGTGAAGGCTAAATCACAACTTTATGCAATGCAGCTCAATTC
TTGTAAAGATTCGTTGAAGTCACGTTCCTGGTGGTAA

Upstream 100 bases:

>100_bases
GATTGTATGCAGTATATTTGATACAATATTTTTTAAATTGATACCTTATATCGTAGCATTGATATTCAATACTGCAGGAT
GAGTTTTTTATCATTAAATC

Downstream 100 bases:

>100_bases
TTAAGATGGCCTAATTATGTTCTTGCCAGTGGAAATAAAGTCAGATTTGGAACATATATGATTTTGTGTGTTTATAATAA
CCGCCATAACACGAAGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulatory Protein; Lytic Transglycosylase Catalytic; Soluble Lytic Murein Transglycosylase; Glycoside Hydroylase Family; Lytic Transglycosylase; Lytic Murein Transglycosylase; Glycoside Hydrolase Family Protein; Transcriptional Regulator Protein; Transmembrane Protein; Transglycosylase SLT Domain; Conserved Secreted Protein

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKIRFTLLCFSIFLTGCVSKPPADINNICNIFKQYPKWYVDSKDVERRWKVPVPVQMAIIHQESKFNARARPPRTKLLWI
IPWTRPSTAYGYTQALRSTWDNYKRTNGWFWSSRDDFGDGVDFIGWYANQANIKAGIPRTDAYSLYLAYHEGIGGYQRKT
YLKKPWLISVARKVKAKSQLYAMQLNSCKDSLKSRSWW

Sequences:

>Translated_198_residues
MKIRFTLLCFSIFLTGCVSKPPADINNICNIFKQYPKWYVDSKDVERRWKVPVPVQMAIIHQESKFNARARPPRTKLLWI
IPWTRPSTAYGYTQALRSTWDNYKRTNGWFWSSRDDFGDGVDFIGWYANQANIKAGIPRTDAYSLYLAYHEGIGGYQRKT
YLKKPWLISVARKVKAKSQLYAMQLNSCKDSLKSRSWW
>Mature_198_residues
MKIRFTLLCFSIFLTGCVSKPPADINNICNIFKQYPKWYVDSKDVERRWKVPVPVQMAIIHQESKFNARARPPRTKLLWI
IPWTRPSTAYGYTQALRSTWDNYKRTNGWFWSSRDDFGDGVDFIGWYANQANIKAGIPRTDAYSLYLAYHEGIGGYQRKT
YLKKPWLISVARKVKAKSQLYAMQLNSCKDSLKSRSWW

Specific function: Unknown

COG id: COG4764

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23265; Mature: 23265

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRFTLLCFSIFLTGCVSKPPADINNICNIFKQYPKWYVDSKDVERRWKVPVPVQMAII
CEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEE
HQESKFNARARPPRTKLLWIIPWTRPSTAYGYTQALRSTWDNYKRTNGWFWSSRDDFGDG
ECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC
VDFIGWYANQANIKAGIPRTDAYSLYLAYHEGIGGYQRKTYLKKPWLISVARKVKAKSQL
CCEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
YAMQLNSCKDSLKSRSWW
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKIRFTLLCFSIFLTGCVSKPPADINNICNIFKQYPKWYVDSKDVERRWKVPVPVQMAII
CEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEE
HQESKFNARARPPRTKLLWIIPWTRPSTAYGYTQALRSTWDNYKRTNGWFWSSRDDFGDG
ECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC
VDFIGWYANQANIKAGIPRTDAYSLYLAYHEGIGGYQRKTYLKKPWLISVARKVKAKSQL
CCEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
YAMQLNSCKDSLKSRSWW
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA