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The map label for this gene is ybfF [C]

Identifier: 52841636

GI number: 52841636

Start: 1551307

End: 1552482

Strand: Direct

Name: ybfF [C]

Synonym: lpg1406

Alternate gene names: 52841636

Gene position: 1551307-1552482 (Clockwise)

Preceding gene: 52841634

Following gene: 52841638

Centisome position: 45.66

GC content: 35.88

Gene sequence:

>1176_bases
CTGATCAGTATGCCCAAAGAAAAAGTCGTTATTATTATCCCTACCTATAATGAAGAAGATAATATTTCTAATACGATTGA
TTTGATTCTTAAGGAGACATACTCACTCGCAGATTATCAGGTTGACATTCTTGTATTTGATAGTCACTCTACAGATTCTA
CAGCCCATATAGTTCGAGAGCTAACTTATACCTCTCAACGTATTCATTTTGCACAAGAACCACAGAAAACTGGACTTGGT
TCCGCTTACCTGCAAGCTATGAGAATTGCAATAGATGAGTTAAATGCAGATGTTGTATTTGAGTTTGATGCAGATGGTTC
TCATCAACCTTGTTATATTGCTCCAATGTTAGAGCTACTTAAACAGCATGATGTAGTTGTGGGGAGCCGATATATTTCAG
GGGGAAGGATTCCCTCAAACTGGGCATTCCATCGTAAATTATTATCTGTGGGAGGTAATTGGGTTGCTCGTATGTTATTA
ACTGGAAAATATAAAGATCTTACTTCTGGCTTAAGGGCAATACGTACCAATCTGTTAAAGAAACTATTGCCTTCAAACTT
CCTATCCAATAATTACGCATATAAACTTGAGTTATATTGGCTTTTACACAAGGCAAAAGCCAGGATCGTTGAATTTCCTA
TTCAATTTATTGATAGAGAAAAAGGGAAAAGTAAATTACCTAAGAACAGTATGATTGACACCTTGCGTGTTCTTTTTACC
CTTCGCTTCAGAGAATTACGCCAGTACCTAACTATGTGTTGTGTGGGCTCTATCGGTGCATTGATTCAATTCAGCTTATA
CAATTGGTTGCGCAGTTCGAACCATTCCGCTCTGGTATCCAGCCAGGTTGCTATCAGTGCTGCTATTATATCCAATTTTA
TTTTTCACCATTCCATTACATTCAAACAAAAAACTGACTTCCGGATAACTAAAACAACATTTAGCCGTTTTACACAATTT
ATTATTTATTCCACATTTATGGTTTATTTTCAAAGCCTATGGGTTCATATTTTTGTCCATTCCTTTGGACAAGGTGTTTT
GAAAGAAAATATCATTGTAGCCTCAGGCTTGGGTATTGGATCTATTATCAATTACCTGTTTTATTCAAATATTATTTGGT
CATCAAAAGGCACTCATTCCCTCAATTCAAACTCTTCTAAAGAAACTCAAATTTGA

Upstream 100 bases:

>100_bases
AGAATAAATCTTTACAATAGTAACTGCCACTTAAAGTTTGTTTACGGCAAGCCCACCATTTGATAAGATTTGCTTACTTC
TATAATCTGCTTCTTATGAT

Downstream 100 bases:

>100_bases
AAGCAAAAGAAATTGGGGGCATAAGTCCTGTTTCATTTAAGTATCCAGCTTATTACTGCACCAATAGGCGTAAATGATTG
GCTTACCTTTTTCATCAAAA

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MISMPKEKVVIIIPTYNEEDNISNTIDLILKETYSLADYQVDILVFDSHSTDSTAHIVRELTYTSQRIHFAQEPQKTGLG
SAYLQAMRIAIDELNADVVFEFDADGSHQPCYIAPMLELLKQHDVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLL
TGKYKDLTSGLRAIRTNLLKKLLPSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFT
LRFRELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAISAAIISNFIFHHSITFKQKTDFRITKTTFSRFTQF
IIYSTFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSIINYLFYSNIIWSSKGTHSLNSNSSKETQI

Sequences:

>Translated_391_residues
MISMPKEKVVIIIPTYNEEDNISNTIDLILKETYSLADYQVDILVFDSHSTDSTAHIVRELTYTSQRIHFAQEPQKTGLG
SAYLQAMRIAIDELNADVVFEFDADGSHQPCYIAPMLELLKQHDVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLL
TGKYKDLTSGLRAIRTNLLKKLLPSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFT
LRFRELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAISAAIISNFIFHHSITFKQKTDFRITKTTFSRFTQF
IIYSTFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSIINYLFYSNIIWSSKGTHSLNSNSSKETQI
>Mature_391_residues
MISMPKEKVVIIIPTYNEEDNISNTIDLILKETYSLADYQVDILVFDSHSTDSTAHIVRELTYTSQRIHFAQEPQKTGLG
SAYLQAMRIAIDELNADVVFEFDADGSHQPCYIAPMLELLKQHDVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLL
TGKYKDLTSGLRAIRTNLLKKLLPSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFT
LRFRELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAISAAIISNFIFHHSITFKQKTDFRITKTTFSRFTQF
IIYSTFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIGSIINYLFYSNIIWSSKGTHSLNSNSSKETQI

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=245, Percent_Identity=31.8367346938775, Blast_Score=122, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI71999402, Length=245, Percent_Identity=34.6938775510204, Blast_Score=126, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6325441, Length=231, Percent_Identity=25.1082251082251, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24585265, Length=238, Percent_Identity=32.3529411764706, Blast_Score=119, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 44657; Mature: 44657

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISMPKEKVVIIIPTYNEEDNISNTIDLILKETYSLADYQVDILVFDSHSTDSTAHIVRE
CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHH
LTYTSQRIHFAQEPQKTGLGSAYLQAMRIAIDELNADVVFEFDADGSHQPCYIAPMLELL
HHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHH
KQHDVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGKYKDLTSGLRAIRTNLLK
HHCCEEEECEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KLLPSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFT
HHHCHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LRFRELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAISAAIISNFIFHHSIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEE
FKQKTDFRITKTTFSRFTQFIIYSTFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIG
EEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCHH
SIINYLFYSNIIWSSKGTHSLNSNSSKETQI
HHHHHHHHHHHEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MISMPKEKVVIIIPTYNEEDNISNTIDLILKETYSLADYQVDILVFDSHSTDSTAHIVRE
CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHH
LTYTSQRIHFAQEPQKTGLGSAYLQAMRIAIDELNADVVFEFDADGSHQPCYIAPMLELL
HHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEHHHHHHHH
KQHDVVVGSRYISGGRIPSNWAFHRKLLSVGGNWVARMLLTGKYKDLTSGLRAIRTNLLK
HHCCEEEECEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KLLPSNFLSNNYAYKLELYWLLHKAKARIVEFPIQFIDREKGKSKLPKNSMIDTLRVLFT
HHHCHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LRFRELRQYLTMCCVGSIGALIQFSLYNWLRSSNHSALVSSQVAISAAIISNFIFHHSIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEE
FKQKTDFRITKTTFSRFTQFIIYSTFMVYFQSLWVHIFVHSFGQGVLKENIIVASGLGIG
EEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCHH
SIINYLFYSNIIWSSKGTHSLNSNSSKETQI
HHHHHHHHHHHEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]