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The map label for this gene is 52841546

Identifier: 52841546

GI number: 52841546

Start: 1445315

End: 1446064

Strand: Reverse

Name: 52841546

Synonym: lpg1315

Alternate gene names: NA

Gene position: 1446064-1445315 (Counterclockwise)

Preceding gene: 52841547

Following gene: 52841545

Centisome position: 42.56

GC content: 41.87

Gene sequence:

>750_bases
ATGCCAAGACTGATGCTTAGTGATGAGCTATGGTCAAAGCTGAAGGGAATCATGCTACAGCACAAGATTTATGACAAGCC
AAATCTGCGAATGATCGTTGAGGGAATGTTATATCACATGCGTGTTGGTTGCCCTTGGCGAGACCTACCAGCAGCATTTG
GATGCTGGAATTCAATTTATCAACAATTTAATCGTTGGTCATTCAAAGATAAATTAATGCAAATTTTTAAAGCACTTGTG
CACGCTCCCGATCTTGAATGGGAATTCATCGACGGGAGTATTGTTCGTGCTCACCAACACAGCACAGGCGCGTGTAGTAC
AGAAAGCGAAGCCATTGGTAAGTCCAGAGGAGGTAACACAACAAAAATTCATATGGCTGTTGATGCCTTTGGGTTACCTA
TTGAATTTCAACTAACCGGGGGCAAGGTACATGATGCAAAAGCCGCGCCAGAGCTAATTGAACAATTGCCCAAATCTGAT
TATGTTATTGCTGACAAAGGATATGATAGTGAAGACATTCGGGAACAAATCAGGGAAAAGGGTTCTATACCAAACATCCC
ACGGAAAAGTAACTCCAAAACCGGTAATAAGGATATTGATTGGTATTTGTACAAATATCGGCATCTGGTGGAAAACATGT
TTGCATGTCTTAAACATTTTCGCGCCATTGCCACGCGATATGACAAATTGAAACGAAATTATGCCTCCATGATTGCAATC
GCTTGCTCTTGTATGTGGCTGCCTATGTAA

Upstream 100 bases:

>100_bases
TAAAGGTAACACCGAGTTTGAATAATCAGTTAATCTATTGATAAGTAGAAGCAAACTCATAATATACTGGTTCTCACCCC
AGATATAAAATGAGTTTGCA

Downstream 100 bases:

>100_bases
TCACACCATCCAGTGTTATCATTCCTGTGAGTCCAATATCAACAAGGAAGCAGGATGAGGTCATTTTACGTCTATATCAT
GGCGAGCAAGCGTAATGGGA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MPRLMLSDELWSKLKGIMLQHKIYDKPNLRMIVEGMLYHMRVGCPWRDLPAAFGCWNSIYQQFNRWSFKDKLMQIFKALV
HAPDLEWEFIDGSIVRAHQHSTGACSTESEAIGKSRGGNTTKIHMAVDAFGLPIEFQLTGGKVHDAKAAPELIEQLPKSD
YVIADKGYDSEDIREQIREKGSIPNIPRKSNSKTGNKDIDWYLYKYRHLVENMFACLKHFRAIATRYDKLKRNYASMIAI
ACSCMWLPM

Sequences:

>Translated_249_residues
MPRLMLSDELWSKLKGIMLQHKIYDKPNLRMIVEGMLYHMRVGCPWRDLPAAFGCWNSIYQQFNRWSFKDKLMQIFKALV
HAPDLEWEFIDGSIVRAHQHSTGACSTESEAIGKSRGGNTTKIHMAVDAFGLPIEFQLTGGKVHDAKAAPELIEQLPKSD
YVIADKGYDSEDIREQIREKGSIPNIPRKSNSKTGNKDIDWYLYKYRHLVENMFACLKHFRAIATRYDKLKRNYASMIAI
ACSCMWLPM
>Mature_248_residues
PRLMLSDELWSKLKGIMLQHKIYDKPNLRMIVEGMLYHMRVGCPWRDLPAAFGCWNSIYQQFNRWSFKDKLMQIFKALVH
APDLEWEFIDGSIVRAHQHSTGACSTESEAIGKSRGGNTTKIHMAVDAFGLPIEFQLTGGKVHDAKAAPELIEQLPKSDY
VIADKGYDSEDIREQIREKGSIPNIPRKSNSKTGNKDIDWYLYKYRHLVENMFACLKHFRAIATRYDKLKRNYASMIAIA
CSCMWLPM

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 28736; Mature: 28604

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLMLSDELWSKLKGIMLQHKIYDKPNLRMIVEGMLYHMRVGCPWRDLPAAFGCWNSIY
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QQFNRWSFKDKLMQIFKALVHAPDLEWEFIDGSIVRAHQHSTGACSTESEAIGKSRGGNT
HHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCCCCCCCHHHHHHCCCCCCC
TKIHMAVDAFGLPIEFQLTGGKVHDAKAAPELIEQLPKSDYVIADKGYDSEDIREQIREK
EEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHC
GSIPNIPRKSNSKTGNKDIDWYLYKYRHLVENMFACLKHFRAIATRYDKLKRNYASMIAI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACSCMWLPM
HHHHHHCCC
>Mature Secondary Structure 
PRLMLSDELWSKLKGIMLQHKIYDKPNLRMIVEGMLYHMRVGCPWRDLPAAFGCWNSIY
CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QQFNRWSFKDKLMQIFKALVHAPDLEWEFIDGSIVRAHQHSTGACSTESEAIGKSRGGNT
HHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCCCCCCCHHHHHHCCCCCCC
TKIHMAVDAFGLPIEFQLTGGKVHDAKAAPELIEQLPKSDYVIADKGYDSEDIREQIREK
EEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHC
GSIPNIPRKSNSKTGNKDIDWYLYKYRHLVENMFACLKHFRAIATRYDKLKRNYASMIAI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACSCMWLPM
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8126444 [H]