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The map label for this gene is 52841545

Identifier: 52841545

GI number: 52841545

Start: 1444970

End: 1445260

Strand: Reverse

Name: 52841545

Synonym: lpg1314

Alternate gene names: NA

Gene position: 1445260-1444970 (Counterclockwise)

Preceding gene: 52841546

Following gene: 52841544

Centisome position: 42.54

GC content: 41.58

Gene sequence:

>291_bases
ATGAGGTCATTTTACGTCTATATCATGGCGAGCAAGCGTAATGGGACATTATACGTCGGTTCAACGGTTGATTTGATTAA
ACGCGTTTGGCAGCACAAGCAGAAAGTGGTTCCGGCGTTTACTGCTACTTACAATGTGCATATTCTAGTTTATTACGAAA
TCCATCAGAGCTACATCGAGGCTGCACGGCGTGAAAAACGTTTCAAAAACTGGCCTCGACAATGGAAAATAAACACCATT
GAACAGTTAAATTCAGAATGGCGTGATCTATACGAAGATATTTGCCGCTAA

Upstream 100 bases:

>100_bases
CTCCATGATTGCAATCGCTTGCTCTTGTATGTGGCTGCCTATGTAATCACACCATCCAGTGTTATCATTCCTGTGAGTCC
AATATCAACAAGGAAGCAGG

Downstream 100 bases:

>100_bases
TCAGATCGTCTGGATGCCGCGGACAAGCCGCGTCACGTAGGCTGGAGGAGTGAATTGTCAACAGACCCTAGTAATTACCA
GTGACCTTATACAAAATATG

Product: hypothetical protein

Products: NA

Alternate protein names: Excinuclease ABC C Subunit Domain Protein; Endonuclease; Endo/Excinuclease Amino Terminal Domain-Containing Protein; Excinuclease ABC Subunit C Domain-Containing Protein; Excinuclease ABC C Subunit; Excinuclease ABC C Subunit Domain-Containing Protein; Excinuclease ABC C Subunit-Like Protein; Endo/Excinuclease Amino Terminal Domain Protein; GIY-YIG Catalytic Domain-Containing Protein; Endonuclease Containing A URI Domain; Endonuclease Protein; Crossover Junction Endodeoxyribonuclease RuvC; Excinuclease ABC; GIY-YIG Endonuclease Domain-Containing Protein; Endo/Excinuclease; Excinuclease ABCsubunit C Domain-Containing Protein; Excinuclease ABC C Subunit N-Terminal; GIY-YIG Catalytic Domain Protein

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MRSFYVYIMASKRNGTLYVGSTVDLIKRVWQHKQKVVPAFTATYNVHILVYYEIHQSYIEAARREKRFKNWPRQWKINTI
EQLNSEWRDLYEDICR

Sequences:

>Translated_96_residues
MRSFYVYIMASKRNGTLYVGSTVDLIKRVWQHKQKVVPAFTATYNVHILVYYEIHQSYIEAARREKRFKNWPRQWKINTI
EQLNSEWRDLYEDICR
>Mature_96_residues
MRSFYVYIMASKRNGTLYVGSTVDLIKRVWQHKQKVVPAFTATYNVHILVYYEIHQSYIEAARREKRFKNWPRQWKINTI
EQLNSEWRDLYEDICR

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11790; Mature: 11790

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50164 UVRC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFYVYIMASKRNGTLYVGSTVDLIKRVWQHKQKVVPAFTATYNVHILVYYEIHQSYIE
CCEEEEEEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEHHHHHHHH
AARREKRFKNWPRQWKINTIEQLNSEWRDLYEDICR
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSFYVYIMASKRNGTLYVGSTVDLIKRVWQHKQKVVPAFTATYNVHILVYYEIHQSYIE
CCEEEEEEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEHHHHHHHH
AARREKRFKNWPRQWKINTIEQLNSEWRDLYEDICR
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA