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The map label for this gene is yebC [C]

Identifier: 52841517

GI number: 52841517

Start: 1414540

End: 1415283

Strand: Direct

Name: yebC [C]

Synonym: lpg1286

Alternate gene names: 52841517

Gene position: 1414540-1415283 (Clockwise)

Preceding gene: 52841515

Following gene: 52841518

Centisome position: 41.63

GC content: 40.59

Gene sequence:

>744_bases
ATGGCTGGTCATAGTAAATGGGCTAATATCAAATTCCGTAAAGGTGTTCAGGATGCCAAAAGAGGAAAAATATTTACTAA
ATTAATTCGTGAAATTACTGTAGCTGCCCGTATGGGGGGAGGAGATGAGTCAAGTAATCCACGCTTGAGAGATGCTGTTA
AAAAGGCTCTGAATGCTAATATGAAGCGTGATACCATAGATAATGCTGTCAAGCGAGGGGTAGGGGGAGTTGATGGTGAG
GCTATGATAGCCATGCGTTATGAAGGTTACGGGCCAGGTGGTGTTGCTATACTGGTAGATTGTTTGTCTGACAATAAAAA
TCGAACCGTATCGGAAGTTCGACATGCTTTTTCAAAACATGGGGGTAATTTAGGCACTGATGGTTCAGTATCCTATCTTT
TCACTAATCAAGGTGAAATTCTCATGGCTTCTAATCAGCCAGAAGATAAAGTGATGGAGATTGCAATCGATGCTGGCGCT
TCTGATGTTGCTGTAGAAGATGGTCAGATAGAGATCATTACCCCTGTAGAAGCTTATCACACCGTCTTAAATGCTTTACA
GGATGCCGGTTTGGAGGTTGAGCAGTCTCATTTAACTATGCGTGCACAAACCTTGGTTCCAATTAATGATGAAACGGCTG
AAAGTTTAATTAAACTGATTGACATGCTGGAGGATTTGGATGACGTACAAGAAGTTTACAGCAATGCTGAATTCTCTGAA
AAAATATTAGAATCAATGAATTAA

Upstream 100 bases:

>100_bases
AAAAGTTCAAATTGTCGAGAGCATCGATGGCTTTAGTCATTCTTTTTGGTGTTAGAGCATTGTATAATCTCCAAATAAAA
ATTCATTTAGAGGTGATGTA

Downstream 100 bases:

>100_bases
TGACGATTATATTAGGGATAGATCCAGGCTCACGGGTTACAGGATATGGATTGATTAAAGAATCTGACCGTAAAATTGCG
TACATCGATAGCGGCTGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MAGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNANMKRDTIDNAVKRGVGGVDGE
AMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKHGGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGA
SDVAVEDGQIEIITPVEAYHTVLNALQDAGLEVEQSHLTMRAQTLVPINDETAESLIKLIDMLEDLDDVQEVYSNAEFSE
KILESMN

Sequences:

>Translated_247_residues
MAGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNANMKRDTIDNAVKRGVGGVDGE
AMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKHGGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGA
SDVAVEDGQIEIITPVEAYHTVLNALQDAGLEVEQSHLTMRAQTLVPINDETAESLIKLIDMLEDLDDVQEVYSNAEFSE
KILESMN
>Mature_246_residues
AGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNANMKRDTIDNAVKRGVGGVDGEA
MIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKHGGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGAS
DVAVEDGQIEIITPVEAYHTVLNALQDAGLEVEQSHLTMRAQTLVPINDETAESLIKLIDMLEDLDDVQEVYSNAEFSEK
ILESMN

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=29.5546558704453, Blast_Score=105, Evalue=3e-23,
Organism=Escherichia coli, GI1788171, Length=247, Percent_Identity=56.2753036437247, Blast_Score=283, Evalue=1e-77,
Organism=Escherichia coli, GI1788294, Length=233, Percent_Identity=40.343347639485, Blast_Score=156, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17556100, Length=246, Percent_Identity=27.6422764227642, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=33.3333333333333, Blast_Score=124, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24583305, Length=249, Percent_Identity=27.3092369477912, Blast_Score=81, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26854; Mature: 26722

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNAN
CCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
MKRDTIDNAVKRGVGGVDGEAMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKH
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHEEEEHHCCCCCCCHHHHHHHHHHC
GGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGASDVAVEDGQIEIITPVEAYH
CCCCCCCCCEEEEEECCCCEEEECCCCHHHHEEEEEECCCCCEEEECCCEEEECHHHHHH
TVLNALQDAGLEVEQSHLTMRAQTLVPINDETAESLIKLIDMLEDLDDVQEVYSNAEFSE
HHHHHHHHCCCCCHHHHHHEEHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
KILESMN
HHHHHCC
>Mature Secondary Structure 
AGHSKWANIKFRKGVQDAKRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNAN
CCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
MKRDTIDNAVKRGVGGVDGEAMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSKH
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHEEEEHHCCCCCCCHHHHHHHHHHC
GGNLGTDGSVSYLFTNQGEILMASNQPEDKVMEIAIDAGASDVAVEDGQIEIITPVEAYH
CCCCCCCCCEEEEEECCCCEEEECCCCHHHHEEEEEECCCCCEEEECCCEEEECHHHHHH
TVLNALQDAGLEVEQSHLTMRAQTLVPINDETAESLIKLIDMLEDLDDVQEVYSNAEFSE
HHHHHHHHCCCCCHHHHHHEEHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
KILESMN
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA