Click here to switch to the map view.

The map label for this gene is 52841470

Identifier: 52841470

GI number: 52841470

Start: 1367039

End: 1368013

Strand: Reverse

Name: 52841470

Synonym: lpg1238

Alternate gene names: NA

Gene position: 1368013-1367039 (Counterclockwise)

Preceding gene: 52841471

Following gene: 52841469

Centisome position: 40.26

GC content: 32.31

Gene sequence:

>975_bases
ATGTCCTCACCACCTGATGTTATAAAAAACGAAAATAACGATTTTGAAATTGTCTCTCCGAGGCCATATGGCCTCATTGA
GGATTTGTGTAAGGTAAAATATAAAAACAGGGCTTGCATGTATCCTGGATGTAATCAGCCAACGATAAATTCTCATACTT
TATCGAAAGCATCTATCCGGAAATATGCAAATAATCAAATTATTAATTTAAAGACGATTAACCATGACCTGTTTGAAAAT
ATAAAGCCTACAGTAAATCGCAAGTATTATAAACCCTGTGATCTAAATAAAATATCAACCTTCAATGGCTTCTGTAGTGA
ACATGATAATAGCATCTTCTATGAATTAGATAATTACGATGGCAATATAACCCCGCAGATCGCTCTTCTTGGGCATTATC
GAATAATTTGTTACGGGCTAAACACCATCCGACTCCAATTAAAACAAAATGAATTTTTGAGAGGTGCTAAATTTGTAGGA
GCTGCAACAAAAAAAATAAATGAAATTTACAGAAAAATTAAAAATGGCTTTTATGAGCGCAGGTTAAAAATGGCAGAAAC
AGATTATGTAAGGAGAAAAATGATCTGTGAAGATATATTGGCTATTGGTACAACGCATGATATTAAGTTTGTTACCCTGC
AAGGCACAATGAGTGATCCATTATTTTTTGGAAGAGCTGGAATATTTTTGCATCAATTTGGTAAGGAAAGGTTACCTTTA
AGGTTTATGCTCCAAATGCCATACATATCTTATTTTTCTATTTGTGATGGAAAAACATGTAAATTAATTTTTGTTTATCT
TGCTCAAGATTCAAACGAATACGAACGTGATTTGGAAAATTTTCTTAATCATGTAGATCTAAAAAAACGCTTGGAGATTT
TAATCTACCCACATAGCGATTGTTGTATCTTAAGAAATGATATTCCACAAACCAGTGATAACACTATTAAGCAACTGATA
AATTTTTACCGATAA

Upstream 100 bases:

>100_bases
GGCTTCACTACCAAACTTATAGAAAAGCAACCCGAATATAAAAAATTTTTTGAAGAAATTGGTAATGAATTATTTTTAAA
ATGAATCATAAGCTTTTCCC

Downstream 100 bases:

>100_bases
TAGTCAATGAATTGTCCTGGTTCTCAACTTGTAGCCAATACCAAGCCATTTACTACATCTATCACTATGTACAATCTGAA
CTGAAAATTAATTCGTGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSSPPDVIKNENNDFEIVSPRPYGLIEDLCKVKYKNRACMYPGCNQPTINSHTLSKASIRKYANNQIINLKTINHDLFEN
IKPTVNRKYYKPCDLNKISTFNGFCSEHDNSIFYELDNYDGNITPQIALLGHYRIICYGLNTIRLQLKQNEFLRGAKFVG
AATKKINEIYRKIKNGFYERRLKMAETDYVRRKMICEDILAIGTTHDIKFVTLQGTMSDPLFFGRAGIFLHQFGKERLPL
RFMLQMPYISYFSICDGKTCKLIFVYLAQDSNEYERDLENFLNHVDLKKRLEILIYPHSDCCILRNDIPQTSDNTIKQLI
NFYR

Sequences:

>Translated_324_residues
MSSPPDVIKNENNDFEIVSPRPYGLIEDLCKVKYKNRACMYPGCNQPTINSHTLSKASIRKYANNQIINLKTINHDLFEN
IKPTVNRKYYKPCDLNKISTFNGFCSEHDNSIFYELDNYDGNITPQIALLGHYRIICYGLNTIRLQLKQNEFLRGAKFVG
AATKKINEIYRKIKNGFYERRLKMAETDYVRRKMICEDILAIGTTHDIKFVTLQGTMSDPLFFGRAGIFLHQFGKERLPL
RFMLQMPYISYFSICDGKTCKLIFVYLAQDSNEYERDLENFLNHVDLKKRLEILIYPHSDCCILRNDIPQTSDNTIKQLI
NFYR
>Mature_323_residues
SSPPDVIKNENNDFEIVSPRPYGLIEDLCKVKYKNRACMYPGCNQPTINSHTLSKASIRKYANNQIINLKTINHDLFENI
KPTVNRKYYKPCDLNKISTFNGFCSEHDNSIFYELDNYDGNITPQIALLGHYRIICYGLNTIRLQLKQNEFLRGAKFVGA
ATKKINEIYRKIKNGFYERRLKMAETDYVRRKMICEDILAIGTTHDIKFVTLQGTMSDPLFFGRAGIFLHQFGKERLPLR
FMLQMPYISYFSICDGKTCKLIFVYLAQDSNEYERDLENFLNHVDLKKRLEILIYPHSDCCILRNDIPQTSDNTIKQLIN
FYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37903; Mature: 37772

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPPDVIKNENNDFEIVSPRPYGLIEDLCKVKYKNRACMYPGCNQPTINSHTLSKASIR
CCCCCCHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHH
KYANNQIINLKTINHDLFENIKPTVNRKYYKPCDLNKISTFNGFCSEHDNSIFYELDNYD
HHCCCCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCC
GNITPQIALLGHYRIICYGLNTIRLQLKQNEFLRGAKFVGAATKKINEIYRKIKNGFYER
CCCCEEEEEEECEEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLKMAETDYVRRKMICEDILAIGTTHDIKFVTLQGTMSDPLFFGRAGIFLHQFGKERLPL
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCHHHHHHHHHCCCCCCE
RFMLQMPYISYFSICDGKTCKLIFVYLAQDSNEYERDLENFLNHVDLKKRLEILIYPHSD
EEEECCCCHHHHECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCHHCCEEEEEEECCC
CCILRNDIPQTSDNTIKQLINFYR
EEEEECCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SSPPDVIKNENNDFEIVSPRPYGLIEDLCKVKYKNRACMYPGCNQPTINSHTLSKASIR
CCCCCHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHH
KYANNQIINLKTINHDLFENIKPTVNRKYYKPCDLNKISTFNGFCSEHDNSIFYELDNYD
HHCCCCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCC
GNITPQIALLGHYRIICYGLNTIRLQLKQNEFLRGAKFVGAATKKINEIYRKIKNGFYER
CCCCEEEEEEECEEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLKMAETDYVRRKMICEDILAIGTTHDIKFVTLQGTMSDPLFFGRAGIFLHQFGKERLPL
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCHHHHHHHHHCCCCCCE
RFMLQMPYISYFSICDGKTCKLIFVYLAQDSNEYERDLENFLNHVDLKKRLEILIYPHSD
EEEECCCCHHHHECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCHHCCEEEEEEECCC
CCILRNDIPQTSDNTIKQLINFYR
EEEEECCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA