Click here to switch to the map view.

The map label for this gene is flgK

Identifier: 52841457

GI number: 52841457

Start: 1350230

End: 1352179

Strand: Direct

Name: flgK

Synonym: lpg1225

Alternate gene names: 52841457

Gene position: 1350230-1352179 (Clockwise)

Preceding gene: 52841456

Following gene: 52841458

Centisome position: 39.74

GC content: 38.56

Gene sequence:

>1950_bases
ATGTCTATACTTAATATTGCCTATTCAGGATTGAATGCTTTTCAGCGTGCCTTAGATGTTACTGGCAATAATATTGCTAA
TTTTAAAACCAGAGGGTATAGCAGACAATCTATCCAATTTACACCTATTACCTCAAATCGCTATGCTGGTTCATACATAG
GAGCAGGGGTATCTGTTGCATCGATTTATCGAAACGTTGATCAATTTGCCAATGCTCAGGTTAGAAGTACCTTGAGTTAT
AGAACTCAGTATGATGCGTTTTATAATCAGGCAATTCAGATAGATAAATTGCTTTCACAGGATGGATCAAGTATTTCGGT
TCCTTTACAAACTTTTTTTGATTCAATAGGCCAATTGAACAGTACTCCCGATAATATAGCGACAAGAGGTGTGGTACTAA
AACAGAGTCAGTTATTAGCTCAGCAATTTAATTCGCTACAAACAAAACTTGAAGAGTATGAGCGTAATTCAACATTGCAA
CTAACAGAGTCAGTAAAAATAATTAATCGCATAACAAAAGAGTTGGCTGAAGTCAATGGAAAATTATTAGGGAATAACAA
CATACCTGAATTACTTGACCATAGAGACGAGCTGCTCAAACAATTATCTGGTTATACTGATCTTAGTATTTTTGATCAGG
GTGATGGTACGATTAGTGTTGGAATTGCCAGCGGAGATATGCTAGTGGCAGGAACCCAGCAACGCGATTTGCTAGTAGGT
ACAGGTAAAGATTCTATTTTTGGAACAAGGATCTTTTTAAGTAGTGGAGGAAATAACCAAGTCGATATTACAGACAGGCT
CACTACCGGTATGTTAGGCGGTCTTATAGATTATGAGAAAAATGTTTTGGGACAGGCCAGCCAATTAATAGGTCAAATGG
CCATTGGTTTAGCTCAGACATTTAATACCCAACATAAGTTGGGAATGGACATGAATAGCCAAATTGGCAAGGATTTTTTT
ACTGATTTTAATTCCCCGGGACAAATGCTGAAACGATCTACAGCTTCAGCTGACAATAGTGGAACTGCTGTCTTATCTGT
CAATATCTCAGATATATCCCAAGTGAAATTAAGCGATTACGATCTGATAATTAGCGATACTGGGGCTAATGAATTGCGAT
TGATAAGAAAATCAGATGGTACTTCTACAACCTTAACCTGGTCAAGCTCGCCACCAGCCCCACCAGCAGGGCAAGTAGTT
ATAGATGGAATGACGATTACAGTAAACGATTTATCGCAATTGGCAAATAATGACCATTATACTCTAACCCCTACCAGAGG
AGCAGCCAGAGATTTTGCCTTGGAAATTAAGGATGCTTATGAAATTGCGCTGGCTTCTCCAGTGAAAACAACGGCGTCAT
TAAATAATACCGGGCAAGGTCAAATTATTTTAGGGCCAGTATTGAATACGGCTTCTGTTAACAAACAATTCAGGATAGAT
TTCATTTCGGATACTCAATACAACCTGGTTAATGTAACGGACAGTACAACAGCCGGTCCGTTTGCCTTTATACCAAATAC
AAACAATGTCATTCAAATTCCCGATGGAATAACTCCTTCTTATTCAGTTGTTTTATCCGGAATTCCCAAATCCGGAGACC
AATTTACTACTGATTACAATACTGGTGGATTTGGTGATAATCGCAATGGCTTGATCCTTGGCAACATACAACAAAACAAG
ATTTTTTCAAATGGCAGCGAAACCTTATTTGATAGATATGGTAATTTGCTTGCTGAAGTGGGAGGCAGAACCAATCAAGC
TAAAACCAGCTTTGAATCTGCCGATATACTTCATAAGCAGGCATTGGATTTTCAGGATAGCAAAAGTGGGGTCAATCTGG
ATGAGGAGGGAGCCAATTTGCTTGTCTTTCAACAGGCTTATCAGGCAGCGGGAAAATTGATGGAAATATCCAATCAAATT
ATGAACTTGTTATTCGATATCATGAGGTGA

Upstream 100 bases:

>100_bases
GATGAATTGAACCAGGCAATACAACGATGTGAATCATTCGAACAAAGTTAATAGTTAGGCCCAAGTTAAAGAAAAAATTA
GTTCAGGGAGTGAACAAAAT

Downstream 100 bases:

>100_bases
TGAATGCGTATTTCAACCAATCAGATATATCAGCGGGGTTTGGATAATTTGTTGACCCAACAAGAGAGATTGGCAAGGCT
TCAGGATCAACAAGCCAGCG

Product: flagellar hook-associated protein FlgK

Products: NA

Alternate protein names: HAP1 [H]

Number of amino acids: Translated: 649; Mature: 648

Protein sequence:

>649_residues
MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPITSNRYAGSYIGAGVSVASIYRNVDQFANAQVRSTLSY
RTQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQLNSTPDNIATRGVVLKQSQLLAQQFNSLQTKLEEYERNSTLQ
LTESVKIINRITKELAEVNGKLLGNNNIPELLDHRDELLKQLSGYTDLSIFDQGDGTISVGIASGDMLVAGTQQRDLLVG
TGKDSIFGTRIFLSSGGNNQVDITDRLTTGMLGGLIDYEKNVLGQASQLIGQMAIGLAQTFNTQHKLGMDMNSQIGKDFF
TDFNSPGQMLKRSTASADNSGTAVLSVNISDISQVKLSDYDLIISDTGANELRLIRKSDGTSTTLTWSSSPPAPPAGQVV
IDGMTITVNDLSQLANNDHYTLTPTRGAARDFALEIKDAYEIALASPVKTTASLNNTGQGQIILGPVLNTASVNKQFRID
FISDTQYNLVNVTDSTTAGPFAFIPNTNNVIQIPDGITPSYSVVLSGIPKSGDQFTTDYNTGGFGDNRNGLILGNIQQNK
IFSNGSETLFDRYGNLLAEVGGRTNQAKTSFESADILHKQALDFQDSKSGVNLDEEGANLLVFQQAYQAAGKLMEISNQI
MNLLFDIMR

Sequences:

>Translated_649_residues
MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPITSNRYAGSYIGAGVSVASIYRNVDQFANAQVRSTLSY
RTQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQLNSTPDNIATRGVVLKQSQLLAQQFNSLQTKLEEYERNSTLQ
LTESVKIINRITKELAEVNGKLLGNNNIPELLDHRDELLKQLSGYTDLSIFDQGDGTISVGIASGDMLVAGTQQRDLLVG
TGKDSIFGTRIFLSSGGNNQVDITDRLTTGMLGGLIDYEKNVLGQASQLIGQMAIGLAQTFNTQHKLGMDMNSQIGKDFF
TDFNSPGQMLKRSTASADNSGTAVLSVNISDISQVKLSDYDLIISDTGANELRLIRKSDGTSTTLTWSSSPPAPPAGQVV
IDGMTITVNDLSQLANNDHYTLTPTRGAARDFALEIKDAYEIALASPVKTTASLNNTGQGQIILGPVLNTASVNKQFRID
FISDTQYNLVNVTDSTTAGPFAFIPNTNNVIQIPDGITPSYSVVLSGIPKSGDQFTTDYNTGGFGDNRNGLILGNIQQNK
IFSNGSETLFDRYGNLLAEVGGRTNQAKTSFESADILHKQALDFQDSKSGVNLDEEGANLLVFQQAYQAAGKLMEISNQI
MNLLFDIMR
>Mature_648_residues
SILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPITSNRYAGSYIGAGVSVASIYRNVDQFANAQVRSTLSYR
TQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQLNSTPDNIATRGVVLKQSQLLAQQFNSLQTKLEEYERNSTLQL
TESVKIINRITKELAEVNGKLLGNNNIPELLDHRDELLKQLSGYTDLSIFDQGDGTISVGIASGDMLVAGTQQRDLLVGT
GKDSIFGTRIFLSSGGNNQVDITDRLTTGMLGGLIDYEKNVLGQASQLIGQMAIGLAQTFNTQHKLGMDMNSQIGKDFFT
DFNSPGQMLKRSTASADNSGTAVLSVNISDISQVKLSDYDLIISDTGANELRLIRKSDGTSTTLTWSSSPPAPPAGQVVI
DGMTITVNDLSQLANNDHYTLTPTRGAARDFALEIKDAYEIALASPVKTTASLNNTGQGQIILGPVLNTASVNKQFRIDF
ISDTQYNLVNVTDSTTAGPFAFIPNTNNVIQIPDGITPSYSVVLSGIPKSGDQFTTDYNTGGFGDNRNGLILGNIQQNKI
FSNGSETLFDRYGNLLAEVGGRTNQAKTSFESADILHKQALDFQDSKSGVNLDEEGANLLVFQQAYQAAGKLMEISNQIM
NLLFDIMR

Specific function: Unknown

COG id: COG1256

COG function: function code N; Flagellar hook-associated protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787323, Length=470, Percent_Identity=30.6382978723404, Blast_Score=192, Evalue=7e-50,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR002371 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 70342; Mature: 70210

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPITSNRYAGSYIGAGVSVA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCHHCCCHHHH
SIYRNVDQFANAQVRSTLSYRTQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQLN
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCC
STPDNIATRGVVLKQSQLLAQQFNSLQTKLEEYERNSTLQLTESVKIINRITKELAEVNG
CCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCC
KLLGNNNIPELLDHRDELLKQLSGYTDLSIFDQGDGTISVGIASGDMLVAGTQQRDLLVG
EEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCEEEECCCCCEEEEE
TGKDSIFGTRIFLSSGGNNQVDITDRLTTGMLGGLIDYEKNVLGQASQLIGQMAIGLAQT
CCCCCEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNTQHKLGMDMNSQIGKDFFTDFNSPGQMLKRSTASADNSGTAVLSVNISDISQVKLSDY
CCCHHHCCCCCCHHHCHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEECCC
DLIISDTGANELRLIRKSDGTSTTLTWSSSPPAPPAGQVVIDGMTITVNDLSQLANNDHY
EEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEECEEEEHHHHHHHHCCCCE
TLTPTRGAARDFALEIKDAYEIALASPVKTTASLNNTGQGQIILGPVLNTASVNKQFRID
EECCCCCCCCCEEEEECCCEEEEECCCCHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEE
FISDTQYNLVNVTDSTTAGPFAFIPNTNNVIQIPDGITPSYSVVLSGIPKSGDQFTTDYN
EECCCCEEEEEECCCCCCCCEEECCCCCCEEECCCCCCCCCEEEEECCCCCCCCEEECCC
TGGFGDNRNGLILGNIQQNKIFSNGSETLFDRYGNLLAEVGGRTNQAKTSFESADILHKQ
CCCCCCCCCCEEEECCHHCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHH
ALDFQDSKSGVNLDEEGANLLVFQQAYQAAGKLMEISNQIMNLLFDIMR
HCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPITSNRYAGSYIGAGVSVA
CCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCHHCCCHHHH
SIYRNVDQFANAQVRSTLSYRTQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQLN
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCC
STPDNIATRGVVLKQSQLLAQQFNSLQTKLEEYERNSTLQLTESVKIINRITKELAEVNG
CCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCC
KLLGNNNIPELLDHRDELLKQLSGYTDLSIFDQGDGTISVGIASGDMLVAGTQQRDLLVG
EEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCEEEECCCCCEEEEE
TGKDSIFGTRIFLSSGGNNQVDITDRLTTGMLGGLIDYEKNVLGQASQLIGQMAIGLAQT
CCCCCEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNTQHKLGMDMNSQIGKDFFTDFNSPGQMLKRSTASADNSGTAVLSVNISDISQVKLSDY
CCCHHHCCCCCCHHHCHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEECCC
DLIISDTGANELRLIRKSDGTSTTLTWSSSPPAPPAGQVVIDGMTITVNDLSQLANNDHY
EEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEECEEEEHHHHHHHHCCCCE
TLTPTRGAARDFALEIKDAYEIALASPVKTTASLNNTGQGQIILGPVLNTASVNKQFRID
EECCCCCCCCCEEEEECCCEEEEECCCCHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEE
FISDTQYNLVNVTDSTTAGPFAFIPNTNNVIQIPDGITPSYSVVLSGIPKSGDQFTTDYN
EECCCCEEEEEECCCCCCCCEEECCCCCCEEECCCCCCCCCEEEEECCCCCCCCEEECCC
TGGFGDNRNGLILGNIQQNKIFSNGSETLFDRYGNLLAEVGGRTNQAKTSFESADILHKQ
CCCCCCCCCCEEEECCHHCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHH
ALDFQDSKSGVNLDEEGANLLVFQQAYQAAGKLMEISNQIMNLLFDIMR
HCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8158647 [H]