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The map label for this gene is 52841439

Identifier: 52841439

GI number: 52841439

Start: 1335128

End: 1335583

Strand: Direct

Name: 52841439

Synonym: lpg1207

Alternate gene names: NA

Gene position: 1335128-1335583 (Clockwise)

Preceding gene: 52841438

Following gene: 52841441

Centisome position: 39.29

GC content: 38.16

Gene sequence:

>456_bases
ATGCCAGTTAAAAAGCTTAAACAATTTTTGGACAGCCATAAGATAAAATATTTGTCTATAGCTCATTCACCAGCGTACAC
TGCACAAGAAATCGCTGCTTCTGCTCATGTTTCAGGAAAACAACTGGCAAAGACGGTTATTATAAAAATGGATGGACGTT
TAGCCATGGTAGTATTACCTGCAAGTGACCATATTACCTTTATGAAACTTAAAGAAGCTATTGGTACTTCTGATCTTGAA
CTTGCTACTGAATCAGAGTTTGAAGGGAAATTTGCGGAATGTGATGTTGGAGCTATGCCCCCATTCGGTAATTTGTATGG
TTTACCAGTATTGGTGTCGACTAAACTGAGTGCACAGGATAATATCTTATTCAATGCGGGTTCTCATTCGGAATTGATGC
AACTCTCTTTTGGTGATTTTGAAAAATTAGTAAAGCCCACATTGGTGACGCTATAG

Upstream 100 bases:

>100_bases
AAATGACTGCTTCCAAACAAATGATTCAAAATTTTAAATAAGGGCACTTGAGAGAGGGCATTTTCTGAAAGAATGAGTTA
GTATCGAAAAGGAGTTTGTC

Downstream 100 bases:

>100_bases
AATGAAGCGATTAGTAATATCATTATAAATTATTCAATGGGATTCCTTAAATTATCAAGAACGCGATGAGTAAGCTCTTG
TAATTTTGTTTTTTCATCTT

Product: hypothetical protein

Products: NA

Alternate protein names: YbaK/Prolyl-TRNA Synthetase Domain-Containing Protein; YbaK/Aminoacyl-TRNA Synthetase Associated Region

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MPVKKLKQFLDSHKIKYLSIAHSPAYTAQEIAASAHVSGKQLAKTVIIKMDGRLAMVVLPASDHITFMKLKEAIGTSDLE
LATESEFEGKFAECDVGAMPPFGNLYGLPVLVSTKLSAQDNILFNAGSHSELMQLSFGDFEKLVKPTLVTL

Sequences:

>Translated_151_residues
MPVKKLKQFLDSHKIKYLSIAHSPAYTAQEIAASAHVSGKQLAKTVIIKMDGRLAMVVLPASDHITFMKLKEAIGTSDLE
LATESEFEGKFAECDVGAMPPFGNLYGLPVLVSTKLSAQDNILFNAGSHSELMQLSFGDFEKLVKPTLVTL
>Mature_150_residues
PVKKLKQFLDSHKIKYLSIAHSPAYTAQEIAASAHVSGKQLAKTVIIKMDGRLAMVVLPASDHITFMKLKEAIGTSDLEL
ATESEFEGKFAECDVGAMPPFGNLYGLPVLVSTKLSAQDNILFNAGSHSELMQLSFGDFEKLVKPTLVTL

Specific function: Unknown

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16409; Mature: 16278

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVKKLKQFLDSHKIKYLSIAHSPAYTAQEIAASAHVSGKQLAKTVIIKMDGRLAMVVLP
CCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHEEEEEEECCCEEEEEEE
ASDHITFMKLKEAIGTSDLELATESEFEGKFAECDVGAMPPFGNLYGLPVLVSTKLSAQD
CCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
NILFNAGSHSELMQLSFGDFEKLVKPTLVTL
CEEEECCCCCHHHHCCCCCHHHHHCCCCCCC
>Mature Secondary Structure 
PVKKLKQFLDSHKIKYLSIAHSPAYTAQEIAASAHVSGKQLAKTVIIKMDGRLAMVVLP
CHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHEEEEEEECCCEEEEEEE
ASDHITFMKLKEAIGTSDLELATESEFEGKFAECDVGAMPPFGNLYGLPVLVSTKLSAQD
CCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
NILFNAGSHSELMQLSFGDFEKLVKPTLVTL
CEEEECCCCCHHHHCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA