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The map label for this gene is udk

Identifier: 52841399

GI number: 52841399

Start: 1285388

End: 1286185

Strand: Direct

Name: udk

Synonym: lpg1165

Alternate gene names: 52841399

Gene position: 1285388-1286185 (Clockwise)

Preceding gene: 52841398

Following gene: 161723256

Centisome position: 37.83

GC content: 34.09

Gene sequence:

>798_bases
TTGGAGTACTGGATTTGGCTCAAGAGCTTATCAAGGTACAGATTGATCGGTTTTCTTGTAATTTGTTCCTCAGTTATTAT
AATGGCTTTTTTGACCGCAAGAGAATATTACGTGTCTAAATTTATCTTTGTCATTGGAGGAACTGGAACTGGAAAAACGA
CTGTTTCAGAAGAAATTAAGACAATAGCAGAAGCACAAAATTTCACGGTTACGATATTAAGTCTGGATCATTACTACTTG
CCCCAAAGTATGATGGATCCGGACAAACCAAAGAATTTTGATGTCCCTGAAGCTTTGGAACAAACATTAATTCAACAGCA
TTTGCAGGATTTAGAAGCTGGTAAAACCATATTCAGACCGACCTATGATATGGAAAGCAGTGACAGAGTATTGAATGGGG
AAATGAAAATTATTCCTGCTGATATCATTATTGTCGAAGGAATTTTTGCTGGTGAGTATTTATCCTCTTTAAGGAATCAA
ACAGAAAAACTCAAAATTTATTTACAATCCAATCAAATAAATGACAATTACACAAGGAAGGAAGACAGAGATATAGTTGA
AAGAAAAAGATCATCGGCTTATGCCCATGTTGCGAAAAAGAACCAAATGGCAGGATTTTTTAGATATGTCGCTCCCCATA
TGATTTCTTCAAATATGGTCATTGATAATCCTTGGCTTCCTCAACAAAACATGACTACTACCGAAAAACTTCCTTTGATT
GCAGGCAATAACTTAATAAAATTAAATGAATTTTTATCTTCAGCTGAGAGTCATTTTTTATATAAAACATATAGTTAA

Upstream 100 bases:

>100_bases
TTTTATCAATTGGTTATTAAAATAAATGTTTTTTATGCCAGCATTTGCTGTAATCATTTTATTTTAGCTACAATCTTTAA
AATGGTTCGCTTTGTAAGCT

Downstream 100 bases:

>100_bases
AATGTAACTTATTGCCCCAGGGGATAATTTAGGGGCAATATAAAATGCAATATTTAAAATTGAGTTAAAAGTTCAGTAAT
TCCTTTTTAGGATTACAATA

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MEYWIWLKSLSRYRLIGFLVICSSVIIMAFLTAREYYVSKFIFVIGGTGTGKTTVSEEIKTIAEAQNFTVTILSLDHYYL
PQSMMDPDKPKNFDVPEALEQTLIQQHLQDLEAGKTIFRPTYDMESSDRVLNGEMKIIPADIIIVEGIFAGEYLSSLRNQ
TEKLKIYLQSNQINDNYTRKEDRDIVERKRSSAYAHVAKKNQMAGFFRYVAPHMISSNMVIDNPWLPQQNMTTTEKLPLI
AGNNLIKLNEFLSSAESHFLYKTYS

Sequences:

>Translated_265_residues
MEYWIWLKSLSRYRLIGFLVICSSVIIMAFLTAREYYVSKFIFVIGGTGTGKTTVSEEIKTIAEAQNFTVTILSLDHYYL
PQSMMDPDKPKNFDVPEALEQTLIQQHLQDLEAGKTIFRPTYDMESSDRVLNGEMKIIPADIIIVEGIFAGEYLSSLRNQ
TEKLKIYLQSNQINDNYTRKEDRDIVERKRSSAYAHVAKKNQMAGFFRYVAPHMISSNMVIDNPWLPQQNMTTTEKLPLI
AGNNLIKLNEFLSSAESHFLYKTYS
>Mature_265_residues
MEYWIWLKSLSRYRLIGFLVICSSVIIMAFLTAREYYVSKFIFVIGGTGTGKTTVSEEIKTIAEAQNFTVTILSLDHYYL
PQSMMDPDKPKNFDVPEALEQTLIQQHLQDLEAGKTIFRPTYDMESSDRVLNGEMKIIPADIIIVEGIFAGEYLSSLRNQ
TEKLKIYLQSNQINDNYTRKEDRDIVERKRSSAYAHVAKKNQMAGFFRYVAPHMISSNMVIDNPWLPQQNMTTTEKLPLI
AGNNLIKLNEFLSSAESHFLYKTYS

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17539892, Length=194, Percent_Identity=30.4123711340206, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17539894, Length=194, Percent_Identity=30.4123711340206, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 30511; Mature: 30511

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYWIWLKSLSRYRLIGFLVICSSVIIMAFLTAREYYVSKFIFVIGGTGTGKTTVSEEIK
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHH
TIAEAQNFTVTILSLDHYYLPQSMMDPDKPKNFDVPEALEQTLIQQHLQDLEAGKTIFRP
HHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECC
TYDMESSDRVLNGEMKIIPADIIIVEGIFAGEYLSSLRNQTEKLKIYLQSNQINDNYTRK
CCCCCCCCCEECCCEEEEEEEEEEEEHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCH
EDRDIVERKRSSAYAHVAKKNQMAGFFRYVAPHMISSNMVIDNPWLPQQNMTTTEKLPLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCCCEE
AGNNLIKLNEFLSSAESHFLYKTYS
ECCCEEEHHHHHHHHHHCEEEEECC
>Mature Secondary Structure
MEYWIWLKSLSRYRLIGFLVICSSVIIMAFLTAREYYVSKFIFVIGGTGTGKTTVSEEIK
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHH
TIAEAQNFTVTILSLDHYYLPQSMMDPDKPKNFDVPEALEQTLIQQHLQDLEAGKTIFRP
HHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECC
TYDMESSDRVLNGEMKIIPADIIIVEGIFAGEYLSSLRNQTEKLKIYLQSNQINDNYTRK
CCCCCCCCCEECCCEEEEEEEEEEEEHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCH
EDRDIVERKRSSAYAHVAKKNQMAGFFRYVAPHMISSNMVIDNPWLPQQNMTTTEKLPLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCCCEE
AGNNLIKLNEFLSSAESHFLYKTYS
ECCCEEEHHHHHHHHHHCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA