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The map label for this gene is parE

Identifier: 52840928

GI number: 52840928

Start: 744892

End: 746772

Strand: Reverse

Name: parE

Synonym: lpg0691

Alternate gene names: 52840928

Gene position: 746772-744892 (Counterclockwise)

Preceding gene: 161723258

Following gene: 52840923

Centisome position: 21.98

GC content: 42.8

Gene sequence:

>1881_bases
ATGTCAGAAAACTACACTGCGGAAGCGATTGAAGTCTTAAGTGGTCTTGAGCCTGTTCAACGACGTCCCGGTATGTATAC
CGACACGACACGCCCCAACCATTTGGCTCAGGAAGTGATTGATAATAGCGTCGATGAAGTACTTGCTGGATTTGCCAGCC
GTATTATTGTTACTTTACATGAAGACGGTTCTATTGAAGTCGAGGATGATGGCCGAGGTATGCCAGTTGATTTGCATCCT
CAACTGGGTTTAAGTGGTGTCGAGGTCATTATGACTCGACTTCATGCTGGAGGTAAATTTTCAGATAAAAATTACAGCTT
TTCTGGCGGCTTGCATGGCGTTGGGGTGTCCGTGGTAAATGCCTTGTCAGAACGACTTGACGTCACCATAAAGCGCAATG
GGATCATTTATCAAATGACCTTTGCTAATGGCGACAAATTATGTGAATTAAATGAAACCGGGGTTACAAAAAAAAGAGAG
ACCGGGACTGTTATACGTTTTTGGCCTAATGGCAAATATTTTGATACTACAAAAATTTCTGTAAAACATCTGACTCATGT
ATTAAGAGCAAAAGCGGTATTGTGTAGTGGCCTGTCCATGACCTTTATCAATAAAATCACTAATGAAGAAATGAACTGGT
ATTATGAACAAGGTTTAACTGATTATTTACTGCAAACCTTGCCCGAAGACTATTTGCCTGAAGAACCTTTTGCCGGAGCA
TTCAAAAGTGATGAAGCAACCGTTGATTGGGCTTTGGCCTGGTCAGACTCTGCCAATGGCAATTTAAATGAAAGTTATGT
GAATTTAATCCCGACAATACAAGGAGGCACGCACGTCAATGGATTGCGTTCGGGATTATTTGAAGCCATGTCTGAATTTT
GCGATCTGAGAAACCTTCTTCCTCGTGGAGTAAAATTGACAGCGGATGATCTATGGGAATCATGTCAGTATGTTTTATCA
ATCAAAATGAAAGAGCCGCAATTTGCTGGGCAAACCAAAGAGCGCTTAAGCTCACGCCAAACCTCAGGACTAGTCAGTAA
TGTCATAAAAGACGCTTTTGCAATTTGGTTGAATCAGCATCGCAACCAGGGTGAAGCCATAGCAGCTCTTGCAATAGAAC
GCGCACAGAAACGGCTAAAGCAAGCCAAACAAGTGGCACGCAAACGTGTTAGCCAAGGGCCTGCTTTACCTGGAAAATTA
GCCGACTGCTTGCAAACGGACTTAAGTCAAGCGGAACTATTCCTGGTTGAAGGAGATTCGGCAGGAGGGTCGGCCAAACA
AGCCCGCAATAAAGATTATCAAGCCATTTTACCCTTACGTGGGAAAATACTTAATTCATGGGAAGTAGATTCTTCACAAG
TTCTGGCATCCCAGGAAATTCATGATATATCTGTTGCTATAGGCGTAGATCCTGGCTCTAGCGATCTTGAGGGTCTTCGC
TATGGAAAAATCTGTATTCTTGCCGATGCAGACTCTGATGGAGCTCATATTGCCACACTAATATGTGCCTTGTTTTTAAG
ACACTTCAAACCTCTGGTTAAAGCAGGCCATGTTTTTGTAGCCATGCCCCCGCTCTATCGAATCGATGCAGGTAAGCTGA
TTCACTATGCCCTGGATGATGAAGAAAAAAATAGAATCGTTCAACATCTCAGTCAAACCACAAAATCAAAAGTGAATGTA
CAGCGATTCAAAGGATTAGGTGAAATGAATCCCATTCAGCTTAGAGAAACAACAATGGATCCCAATACAAGGCGTCTGGT
ACAGCTTACTCTTGATGATGAAGAGCAGACGGAAGCCATTATGGATATGATGCTCAACAAAAAAAGGGCCGCCGACAGAA
AACTCTGGCTAGAAACAAAAGGAAACCTTGCTGAAATTTGA

Upstream 100 bases:

>100_bases
AACAAGAGAGAGGTGATAGTAGCAATAAAAATACCATACCACTCTGAGCAAAAGAATGTTTATGATAGAATAAGCACAAT
TAATATTTGAGTGAATACCC

Downstream 100 bases:

>100_bases
GCTAATTGTGACGTGACTTCCTTGATGTTACTAAAAAGGTGGCGGTTAAGAAGTCACTTTCTCTAAAAGGGTTTAAAAAT
TTCATAGCCAGTCAGGAAAA

Product: DNA topoisomerase IV subunit B

Products: NA

Alternate protein names: Topoisomerase IV subunit B [H]

Number of amino acids: Translated: 626; Mature: 625

Protein sequence:

>626_residues
MSENYTAEAIEVLSGLEPVQRRPGMYTDTTRPNHLAQEVIDNSVDEVLAGFASRIIVTLHEDGSIEVEDDGRGMPVDLHP
QLGLSGVEVIMTRLHAGGKFSDKNYSFSGGLHGVGVSVVNALSERLDVTIKRNGIIYQMTFANGDKLCELNETGVTKKRE
TGTVIRFWPNGKYFDTTKISVKHLTHVLRAKAVLCSGLSMTFINKITNEEMNWYYEQGLTDYLLQTLPEDYLPEEPFAGA
FKSDEATVDWALAWSDSANGNLNESYVNLIPTIQGGTHVNGLRSGLFEAMSEFCDLRNLLPRGVKLTADDLWESCQYVLS
IKMKEPQFAGQTKERLSSRQTSGLVSNVIKDAFAIWLNQHRNQGEAIAALAIERAQKRLKQAKQVARKRVSQGPALPGKL
ADCLQTDLSQAELFLVEGDSAGGSAKQARNKDYQAILPLRGKILNSWEVDSSQVLASQEIHDISVAIGVDPGSSDLEGLR
YGKICILADADSDGAHIATLICALFLRHFKPLVKAGHVFVAMPPLYRIDAGKLIHYALDDEEKNRIVQHLSQTTKSKVNV
QRFKGLGEMNPIQLRETTMDPNTRRLVQLTLDDEEQTEAIMDMMLNKKRAADRKLWLETKGNLAEI

Sequences:

>Translated_626_residues
MSENYTAEAIEVLSGLEPVQRRPGMYTDTTRPNHLAQEVIDNSVDEVLAGFASRIIVTLHEDGSIEVEDDGRGMPVDLHP
QLGLSGVEVIMTRLHAGGKFSDKNYSFSGGLHGVGVSVVNALSERLDVTIKRNGIIYQMTFANGDKLCELNETGVTKKRE
TGTVIRFWPNGKYFDTTKISVKHLTHVLRAKAVLCSGLSMTFINKITNEEMNWYYEQGLTDYLLQTLPEDYLPEEPFAGA
FKSDEATVDWALAWSDSANGNLNESYVNLIPTIQGGTHVNGLRSGLFEAMSEFCDLRNLLPRGVKLTADDLWESCQYVLS
IKMKEPQFAGQTKERLSSRQTSGLVSNVIKDAFAIWLNQHRNQGEAIAALAIERAQKRLKQAKQVARKRVSQGPALPGKL
ADCLQTDLSQAELFLVEGDSAGGSAKQARNKDYQAILPLRGKILNSWEVDSSQVLASQEIHDISVAIGVDPGSSDLEGLR
YGKICILADADSDGAHIATLICALFLRHFKPLVKAGHVFVAMPPLYRIDAGKLIHYALDDEEKNRIVQHLSQTTKSKVNV
QRFKGLGEMNPIQLRETTMDPNTRRLVQLTLDDEEQTEAIMDMMLNKKRAADRKLWLETKGNLAEI
>Mature_625_residues
SENYTAEAIEVLSGLEPVQRRPGMYTDTTRPNHLAQEVIDNSVDEVLAGFASRIIVTLHEDGSIEVEDDGRGMPVDLHPQ
LGLSGVEVIMTRLHAGGKFSDKNYSFSGGLHGVGVSVVNALSERLDVTIKRNGIIYQMTFANGDKLCELNETGVTKKRET
GTVIRFWPNGKYFDTTKISVKHLTHVLRAKAVLCSGLSMTFINKITNEEMNWYYEQGLTDYLLQTLPEDYLPEEPFAGAF
KSDEATVDWALAWSDSANGNLNESYVNLIPTIQGGTHVNGLRSGLFEAMSEFCDLRNLLPRGVKLTADDLWESCQYVLSI
KMKEPQFAGQTKERLSSRQTSGLVSNVIKDAFAIWLNQHRNQGEAIAALAIERAQKRLKQAKQVARKRVSQGPALPGKLA
DCLQTDLSQAELFLVEGDSAGGSAKQARNKDYQAILPLRGKILNSWEVDSSQVLASQEIHDISVAIGVDPGSSDLEGLRY
GKICILADADSDGAHIATLICALFLRHFKPLVKAGHVFVAMPPLYRIDAGKLIHYALDDEEKNRIVQHLSQTTKSKVNVQ
RFKGLGEMNPIQLRETTMDPNTRRLVQLTLDDEEQTEAIMDMMLNKKRAADRKLWLETKGNLAEI

Specific function: Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule [H]

COG id: COG0187

COG function: function code L; Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type II topoisomerase family [H]

Homologues:

Organism=Homo sapiens, GI19913408, Length=576, Percent_Identity=24.8263888888889, Blast_Score=116, Evalue=7e-26,
Organism=Homo sapiens, GI19913406, Length=623, Percent_Identity=24.5585874799358, Blast_Score=115, Evalue=9e-26,
Organism=Escherichia coli, GI1789408, Length=631, Percent_Identity=64.8177496038035, Blast_Score=875, Evalue=0.0,
Organism=Escherichia coli, GI48994957, Length=554, Percent_Identity=40.2527075812274, Blast_Score=397, Evalue=1e-111,
Organism=Caenorhabditis elegans, GI17535065, Length=589, Percent_Identity=23.9388794567063, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI212645845, Length=371, Percent_Identity=24.5283018867925, Blast_Score=84, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6324241, Length=682, Percent_Identity=25.366568914956, Blast_Score=141, Evalue=3e-34,
Organism=Drosophila melanogaster, GI17136538, Length=584, Percent_Identity=24.8287671232877, Blast_Score=118, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR020568
- InterPro:   IPR014721
- InterPro:   IPR001241
- InterPro:   IPR013759
- InterPro:   IPR002288
- InterPro:   IPR013506
- InterPro:   IPR013760
- InterPro:   IPR018522
- InterPro:   IPR005737 [H]

Pfam domain/function: PF00204 DNA_gyraseB; PF00986 DNA_gyraseB_C; PF02518 HATPase_c [H]

EC number: 5.99.1.-

Molecular weight: Translated: 69444; Mature: 69313

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00177 TOPOISOMERASE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENYTAEAIEVLSGLEPVQRRPGMYTDTTRPNHLAQEVIDNSVDEVLAGFASRIIVTLH
CCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCEEEEEEE
EDGSIEVEDDGRGMPVDLHPQLGLSGVEVIMTRLHAGGKFSDKNYSFSGGLHGVGVSVVN
CCCEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
ALSERLDVTIKRNGIIYQMTFANGDKLCELNETGVTKKRETGTVIRFWPNGKYFDTTKIS
HHHHHHEEEEECCCEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEECCCCCEECCHHHH
VKHLTHVLRAKAVLCSGLSMTFINKITNEEMNWYYEQGLTDYLLQTLPEDYLPEEPFAGA
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHCCHHHCCCCCCCCC
FKSDEATVDWALAWSDSANGNLNESYVNLIPTIQGGTHVNGLRSGLFEAMSEFCDLRNLL
CCCCCCEEEEEEEECCCCCCCCCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
PRGVKLTADDLWESCQYVLSIKMKEPQFAGQTKERLSSRQTSGLVSNVIKDAFAIWLNQH
CCCCEECHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RNQGEAIAALAIERAQKRLKQAKQVARKRVSQGPALPGKLADCLQTDLSQAELFLVEGDS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCC
AGGSAKQARNKDYQAILPLRGKILNSWEVDSSQVLASQEIHDISVAIGVDPGSSDLEGLR
CCCCHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCE
YGKICILADADSDGAHIATLICALFLRHFKPLVKAGHVFVAMPPLYRIDAGKLIHYALDD
ECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCEEEEECCC
EEKNRIVQHLSQTTKSKVNVQRFKGLGEMNPIQLRETTMDPNTRRLVQLTLDDEEQTEAI
HHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEECCHHHHHHH
MDMMLNKKRAADRKLWLETKGNLAEI
HHHHHHHHHHCCCEEEEECCCCCCCC
>Mature Secondary Structure 
SENYTAEAIEVLSGLEPVQRRPGMYTDTTRPNHLAQEVIDNSVDEVLAGFASRIIVTLH
CCCCHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCEEEEEEE
EDGSIEVEDDGRGMPVDLHPQLGLSGVEVIMTRLHAGGKFSDKNYSFSGGLHGVGVSVVN
CCCEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
ALSERLDVTIKRNGIIYQMTFANGDKLCELNETGVTKKRETGTVIRFWPNGKYFDTTKIS
HHHHHHEEEEECCCEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEECCCCCEECCHHHH
VKHLTHVLRAKAVLCSGLSMTFINKITNEEMNWYYEQGLTDYLLQTLPEDYLPEEPFAGA
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHCCHHHCCCCCCCCC
FKSDEATVDWALAWSDSANGNLNESYVNLIPTIQGGTHVNGLRSGLFEAMSEFCDLRNLL
CCCCCCEEEEEEEECCCCCCCCCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
PRGVKLTADDLWESCQYVLSIKMKEPQFAGQTKERLSSRQTSGLVSNVIKDAFAIWLNQH
CCCCEECHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RNQGEAIAALAIERAQKRLKQAKQVARKRVSQGPALPGKLADCLQTDLSQAELFLVEGDS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCC
AGGSAKQARNKDYQAILPLRGKILNSWEVDSSQVLASQEIHDISVAIGVDPGSSDLEGLR
CCCCHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCE
YGKICILADADSDGAHIATLICALFLRHFKPLVKAGHVFVAMPPLYRIDAGKLIHYALDD
ECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCEEEEECCC
EEKNRIVQHLSQTTKSKVNVQRFKGLGEMNPIQLRETTMDPNTRRLVQLTLDDEEQTEAI
HHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEECCHHHHHHH
MDMMLNKKRAADRKLWLETKGNLAEI
HHHHHHHHHHCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2170028; 8388096; 9278503; 8227000; 8980775 [H]