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The map label for this gene is pilE3

Identifier: 52840864

GI number: 52840864

Start: 662485

End: 662934

Strand: Reverse

Name: pilE3

Synonym: lpg0627

Alternate gene names: NA

Gene position: 662934-662485 (Counterclockwise)

Preceding gene: 52840865

Following gene: 52840863

Centisome position: 19.51

GC content: 43.33

Gene sequence:

>450_bases
ATGCTCAGTCATGTACATTTTATGAAGAATAGCCGTATGAAACAATCCGCGTTTACCCTGGTTGAAGTTCTGATCAGCAT
GGTCATTATGGGCATTCTGGTTTCAATTGCCTATCCATCCTATTTACAATATATCCAAAAATCCCGTCGTGCCGATGCTC
ACGCCACATTGACACAAGATCAAATTATTTTAGAACGCTGTTATTCACAGAATTTTTCTTATGCTGCGGCGTGTGGCGCC
TTACCAGCATTTCCTCAAACAACGCCGAACGGGTACTATACTATCAATATTTCAAACCTGACAGCCACAACGTATACCTT
AACTGCAACCCCTGTTGGAACTCAAGCCAAAGATACCGAGTGTGCCAGCATGTCAATTAACCAGGCCAATGTAAAAACAG
CAGTAGATTCCTCCGCTAATGCGCAACCAGAATGCTGGAATCCCGGTTAA

Upstream 100 bases:

>100_bases
TTCTGATCACACAATCGGATGGAACACAAACTACTGTTATCGCTCCTAACATTACGCCAAGAAAAATAGGCTGGTGGCAA
ATTCAATAGAGGATACCCAA

Downstream 100 bases:

>100_bases
TACTGTAAAAAATTCTTTACACAAAGGATTCAATTCGAGTAGATTTGCCAGTAAGGGAAAGTCCAACTTAATTTGAAATG
GAAATTTTTTGCTTTTTAAT

Product: type IV pilin

Products: NA

Alternate protein names: Type IV Pilin; Type 4 Fimbrial Biogenesis Protein PilE; Type IV Pilin PilE; Type IV Pilus Biogenesis Protein PilE; Pilus Assembly Protein; Prepilin Like Protein; Type-IV Pilin; Fimbrial Protein Pilin; Tfp Pilus Assembly Protein PilE; Type IV Pilin Pile Protein; Type IV Pilus Assembly Protein PilE; Tfp Pilus Assembly Protein PilE-Like Protein

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MLSHVHFMKNSRMKQSAFTLVEVLISMVIMGILVSIAYPSYLQYIQKSRRADAHATLTQDQIILERCYSQNFSYAAACGA
LPAFPQTTPNGYYTINISNLTATTYTLTATPVGTQAKDTECASMSINQANVKTAVDSSANAQPECWNPG

Sequences:

>Translated_149_residues
MLSHVHFMKNSRMKQSAFTLVEVLISMVIMGILVSIAYPSYLQYIQKSRRADAHATLTQDQIILERCYSQNFSYAAACGA
LPAFPQTTPNGYYTINISNLTATTYTLTATPVGTQAKDTECASMSINQANVKTAVDSSANAQPECWNPG
>Mature_149_residues
MLSHVHFMKNSRMKQSAFTLVEVLISMVIMGILVSIAYPSYLQYIQKSRRADAHATLTQDQIILERCYSQNFSYAAACGA
LPAFPQTTPNGYYTINISNLTATTYTLTATPVGTQAKDTECASMSINQANVKTAVDSSANAQPECWNPG

Specific function: Unknown

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16297; Mature: 16297

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSHVHFMKNSRMKQSAFTLVEVLISMVIMGILVSIAYPSYLQYIQKSRRADAHATLTQD
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH
QIILERCYSQNFSYAAACGALPAFPQTTPNGYYTINISNLTATTYTLTATPVGTQAKDTE
HHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCEEEEEEEEEECCCCCCCCCCC
CASMSINQANVKTAVDSSANAQPECWNPG
HHHCCCCCCHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLSHVHFMKNSRMKQSAFTLVEVLISMVIMGILVSIAYPSYLQYIQKSRRADAHATLTQD
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH
QIILERCYSQNFSYAAACGALPAFPQTTPNGYYTINISNLTATTYTLTATPVGTQAKDTE
HHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCEEEEEEEEEECCCCCCCCCCC
CASMSINQANVKTAVDSSANAQPECWNPG
HHHCCCCCCHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA