| Definition | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome. |
|---|---|
| Accession | NC_002942 |
| Length | 3,397,754 |
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The map label for this gene is 52840821
Identifier: 52840821
GI number: 52840821
Start: 618629
End: 619300
Strand: Reverse
Name: 52840821
Synonym: lpg0584
Alternate gene names: NA
Gene position: 619300-618629 (Counterclockwise)
Preceding gene: 52840826
Following gene: 52840820
Centisome position: 18.23
GC content: 38.84
Gene sequence:
>672_bases ATGGGTAGTATATTCAATATGTTCGGGCCATCACCAATAAAGCCCATTGAACAACACATACGTAAAGCACATCAGTGTGC CAAGCAATTGTACCCTTTTTTTGAAGCGGTGCTCAAAAACGATTGGGATACTGCAAACAAGATCAAGGATAAAATCATCT CTATTGAAAAAGAAGCGGATCTAATTAAACGTGATTTGCGTCTTCATCTTCCTACTGGCTTATTTTTACCAGTCGCCCGC ACAGATATATTAGAACTGCTCAGTGCTCAAGATAGAATTGCCAATAAAGCAGAAGATATAGCTGCTTTAATTATAAGCAG ACAAATGAGCATACCTAAAAAATTAATTCCGTCTTTTATGCCTTTTTTAAGCCGATGTCTTGATGCCTCTAAACAAGCCT GTACAGCGATTAATGAATTAGATGAATTGCTTGAAACCGGATTCAGGGGCAGCGAAGTCAAAATCGTTGAAGAAATGATA GTAAAATTAGACGAAATTGAACATGACTGTGATGAAAGACTGGCGGACATTAGGCACAAAATCTTCGAATTAGAAAAGGA ACTCCCAGCTATAGATGTAATTTTTCTATACAAACTGGTCCAATGGATTGGCGAATTGGCTGACCATGCCCAGACAGTTG GTGGTCGACTTCAAATTCTAATTGCCCGGTAG
Upstream 100 bases:
>100_bases CTTTAATCCCTAATCTGTATTCACTCTAGATAAGTAGTAGTTTTGTTCCTCAAAAAGTTTAGGTATAATCCTTAAAATCT GTTATCCGAGATCAAAAATT
Downstream 100 bases:
>100_bases TTATCACTCATGGATTATTCAATTTACCTACTTTTTGCTGCTCTTATTCTTTGTTTTCTTATGACCTGGGGGGTCGGTGC CAATGATTTGGCTAATGTCA
Product: phosphate transport regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MGSIFNMFGPSPIKPIEQHIRKAHQCAKQLYPFFEAVLKNDWDTANKIKDKIISIEKEADLIKRDLRLHLPTGLFLPVAR TDILELLSAQDRIANKAEDIAALIISRQMSIPKKLIPSFMPFLSRCLDASKQACTAINELDELLETGFRGSEVKIVEEMI VKLDEIEHDCDERLADIRHKIFELEKELPAIDVIFLYKLVQWIGELADHAQTVGGRLQILIAR
Sequences:
>Translated_223_residues MGSIFNMFGPSPIKPIEQHIRKAHQCAKQLYPFFEAVLKNDWDTANKIKDKIISIEKEADLIKRDLRLHLPTGLFLPVAR TDILELLSAQDRIANKAEDIAALIISRQMSIPKKLIPSFMPFLSRCLDASKQACTAINELDELLETGFRGSEVKIVEEMI VKLDEIEHDCDERLADIRHKIFELEKELPAIDVIFLYKLVQWIGELADHAQTVGGRLQILIAR >Mature_222_residues GSIFNMFGPSPIKPIEQHIRKAHQCAKQLYPFFEAVLKNDWDTANKIKDKIISIEKEADLIKRDLRLHLPTGLFLPVART DILELLSAQDRIANKAEDIAALIISRQMSIPKKLIPSFMPFLSRCLDASKQACTAINELDELLETGFRGSEVKIVEEMIV KLDEIEHDCDERLADIRHKIFELEKELPAIDVIFLYKLVQWIGELADHAQTVGGRLQILIAR
Specific function: Unknown
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002727 - InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 25439; Mature: 25308
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSIFNMFGPSPIKPIEQHIRKAHQCAKQLYPFFEAVLKNDWDTANKIKDKIISIEKEAD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LIKRDLRLHLPTGLFLPVARTDILELLSAQDRIANKAEDIAALIISRQMSIPKKLIPSFM HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH PFLSRCLDASKQACTAINELDELLETGFRGSEVKIVEEMIVKLDEIEHDCDERLADIRHK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFELEKELPAIDVIFLYKLVQWIGELADHAQTVGGRLQILIAR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC >Mature Secondary Structure GSIFNMFGPSPIKPIEQHIRKAHQCAKQLYPFFEAVLKNDWDTANKIKDKIISIEKEAD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LIKRDLRLHLPTGLFLPVARTDILELLSAQDRIANKAEDIAALIISRQMSIPKKLIPSFM HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH PFLSRCLDASKQACTAINELDELLETGFRGSEVKIVEEMIVKLDEIEHDCDERLADIRHK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFELEKELPAIDVIFLYKLVQWIGELADHAQTVGGRLQILIAR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]