Click here to switch to the map view.

The map label for this gene is 52840754

Identifier: 52840754

GI number: 52840754

Start: 551331

End: 551666

Strand: Reverse

Name: 52840754

Synonym: lpg0509

Alternate gene names: NA

Gene position: 551666-551331 (Counterclockwise)

Preceding gene: 52840762

Following gene: 52840747

Centisome position: 16.24

GC content: 37.2

Gene sequence:

>336_bases
ATGGCTCATTATCTTGGTTTAGCTCATTCTAATCAATTAAAAATTTCAAAAATAATGTTACTTCAGATTGTTAAAACATA
CTTAGTTGTTATTATTCAATTTTTTTTCTATTGTTATCAGCTTGGTAATATAGTCATCCAAATGCCTGAACCGTGCCGTG
TTACGACGCCACTTGCGATGATCGTGAACCGTCGTTCCCGAAGAATAAATTCCCGAACGCATGATGGATTTTGTCACAGT
AGACATCCCGGTTATCACTACATCATTGGTCAGACGAATATTCGCTGCAAGGCAACTTGCTCCACCTATAATACAATCCA
TTCCTATTTGCACTAG

Upstream 100 bases:

>100_bases
GAATAAATGGATAGCGGTGTGGTAACAAAGTAAAAATTTGATTTATATCTATCGATTCGTTCATACCCTAGTTCTCATTA
ATCGCCTATTGCATTACAAA

Downstream 100 bases:

>100_bases
AGCACCAATTGCAGCAGAACCTGCAATAGCAGTATTATTCCCTACATAAACATCATGTGCGATGAGCACTAGACTGTCTA
TACAAACTCCCTCGCCTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MAHYLGLAHSNQLKISKIMLLQIVKTYLVVIIQFFFYCYQLGNIVIQMPEPCRVTTPLAMIVNRRSRRINSRTHDGFCHS
RHPGYHYIIGQTNIRCKATCSTYNTIHSYLH

Sequences:

>Translated_111_residues
MAHYLGLAHSNQLKISKIMLLQIVKTYLVVIIQFFFYCYQLGNIVIQMPEPCRVTTPLAMIVNRRSRRINSRTHDGFCHS
RHPGYHYIIGQTNIRCKATCSTYNTIHSYLH
>Mature_110_residues
AHYLGLAHSNQLKISKIMLLQIVKTYLVVIIQFFFYCYQLGNIVIQMPEPCRVTTPLAMIVNRRSRRINSRTHDGFCHSR
HPGYHYIIGQTNIRCKATCSTYNTIHSYLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12971; Mature: 12839

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHYLGLAHSNQLKISKIMLLQIVKTYLVVIIQFFFYCYQLGNIVIQMPEPCRVTTPLAM
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHH
IVNRRSRRINSRTHDGFCHSRHPGYHYIIGQTNIRCKATCSTYNTIHSYLH
HHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHCC
>Mature Secondary Structure 
AHYLGLAHSNQLKISKIMLLQIVKTYLVVIIQFFFYCYQLGNIVIQMPEPCRVTTPLAM
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHH
IVNRRSRRINSRTHDGFCHSRHPGYHYIIGQTNIRCKATCSTYNTIHSYLH
HHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA